Skip to main content
crop-pal logo
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 9
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400067268 Potato cytosol 87.28 97.31
CDY35464 Canola cytosol, nucleus, plastid 60.53 69.0
CDY53278 Canola extracellular 69.96 68.31
Bra039919.1-P Field mustard extracellular 68.64 68.19
CDY46314 Canola extracellular 68.42 67.97
Bra037236.1-P Field mustard extracellular 69.3 67.67
CDY30328 Canola extracellular 69.3 67.67
Solyc01g110060.2.1 Tomato nucleus 68.86 67.53
AT1G56360.1 Thale cress extracellular 68.42 66.95
Solyc01g110050.1.1 Tomato cytosol 62.72 66.2
CDY59721 Canola extracellular 66.45 65.87
CDY59690 Canola extracellular 66.23 65.65
AT4G36350.1 Thale cress extracellular 66.89 65.45
CDY24789 Canola extracellular 65.79 65.36
Bra010554.1-P Field mustard extracellular 65.57 65.14
AT1G52940.1 Thale cress cytosol 33.77 63.64
AT2G18130.1 Thale cress extracellular 61.4 63.49
AT3G46120.1 Thale cress extracellular 51.75 60.82
CDY71707 Canola extracellular 33.99 58.49
Solyc04g080920.1.1 Tomato extracellular 59.87 57.96
Solyc12g009800.1.1 Tomato extracellular 51.97 49.69
Solyc07g007670.2.1 Tomato extracellular 50.0 47.8
Bra017755.1-P Field mustard cytosol, nucleus, peroxisome 54.82 45.05
Solyc09g009610.1.1 Tomato extracellular 36.4 39.06
Solyc04g051650.2.1 Tomato cytosol 22.81 38.38
Solyc09g009600.1.1 Tomato endoplasmic reticulum, vacuole 36.4 37.64
Solyc07g064500.2.1 Tomato extracellular 35.96 37.61
Solyc10g006300.2.1 Tomato extracellular, golgi, vacuole 34.87 36.3
Solyc09g091910.1.1 Tomato extracellular 35.09 28.83
Solyc04g024640.1.1 Tomato cytosol 12.06 24.44
Solyc04g051640.2.1 Tomato extracellular, golgi 11.62 18.79
Solyc07g008550.2.1 Tomato nucleus 24.56 17.89
Solyc05g012260.2.1 Tomato nucleus 23.03 17.33
Solyc08g083250.2.1 Tomato extracellular 22.81 17.11
Solyc07g008570.2.1 Tomato extracellular, plasma membrane 23.46 16.98
Solyc07g008560.2.1 Tomato extracellular 23.68 16.98
Solyc01g068380.2.1 Tomato extracellular 23.03 16.43
Solyc04g005450.2.1 Tomato nucleus 22.59 15.9
Protein Annotations
Gene3D:2.60.40.380Gene3D:3.60.21.10MapMan:35.1InterPro:Calcineurin-like_PHP_ApaHGO:GO:0003674GO:GO:0003824
GO:GO:0003993GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016311
GO:GO:0016787GO:GO:0046872InterPro:IPR008963InterPro:IPR029052UniProt:K4CFK5InterPro:Metallo-depent_PP-like
PFAM:PF00149PFAM:PF14008PFAM:PF16656PANTHER:PTHR22953PANTHER:PTHR22953:SF84InterPro:Purple_acid_PPase_C_dom
InterPro:Purple_acid_Pase-like_NInterPro:Purple_acid_Pase_NSUPFAM:SSF49363SUPFAM:SSF56300SignalP:SignalP-noTMEnsemblPlantsGene:Solyc07g053070.1
EnsemblPlants:Solyc07g053070.1.1UniParc:UPI000276BC1FSEG:seg:::
Description
Purple acid phosphatase [Source:UniProtKB/TrEMBL;Acc:K4CFK5]
Coordinates
chr7:-:61511946..61514007
Molecular Weight (calculated)
52780.7 Da
IEP (calculated)
7.347
GRAVY (calculated)
-0.539
Length
456 amino acids
Sequence
(BLAST)
001: MHRLVIFLLL LQVFDFCNGG VTSTYIRKSE ASIDMPIQYF PPPLVHITQG DHIGRSVIVS WVTPLESQSN YVTFWEEGAN TKHHHHKHKA HAKTTSYKYY
101: NYTSGYIHHA TIKRLKMQYN VTYIYQLGEH NSTRTFSFTT PPKVGPDVPY TFGIIGDLGQ TFDSNQTLEH YLSNPKGQAM LFVGDLSYAD HYPFHDNVRW
201: DTFGRFIEKS AAYQPWITAA GNHELDFAPE IGENTPFKPY THRYHVPYKA SQGTSPLWYS IKRASTYIIV LSSYSAYGKY TPQYSWLEQE FAKVNRTETP
301: WLIVLLHSPW YNSNNYHYME GESMRVMFES WFVQNKVDMV FAGHVHSYER SERVSNVMYN ITNGQSTPIE DPSAPIYITI GDGGNIEGIA NNFTEPQPSY
401: SAYREASFGH AVLEIKNRTH AYYTWHRNQD SERVAADSLW IYNRHCYPKK ESSSMA
Best Arabidopsis Sequence Match ( AT1G56360.1 )
(BLAST)
001: MKNLVIFAFL FLSITTVING GITSKFVRQA LPSIEMSLDT FPSPGGYNTP EQVHLTQGDH DGRGMIVSWV TPLNLAGSNV VTYWIATNGS DVKPAKKRAH
101: ASTKSYRFYD YSSGFLHHAT IKGLEYDTKY IYEVGTDKSV RQFSFTTPPK IGPDVPYTFG IIGDLGQTYA SNETLYHYMS NPKGQAVLFA GDLSYADDHP
201: NHDQRKWDTW GRFMEPCAAY QPFIFAAGNH EIDFVPNIGE PHAFKPYTHR YPNAYKASQS TSPLWYSVRR ASAHIIVLSS YSAYGKYTPQ YIWLEQELKN
301: VNREETPWLI VIVHSPWYNS NNYHYMEGES MRVMFESWLV NSKVDLVLSG HVHAYERSER ISNIKYNITN GLSSPVKDPN APIYITIGDG GNIEGIANSF
401: VDPQPSYSAY REASFGHAVL EIMNRTHAQY TWHRNQDNEP VAADSIMLHN RHFFPVEEIV SSNIRA
Arabidopsis Description
PAP6Purple acid phosphatase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9C510]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.