Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 7
- vacuole 5
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35464 | Canola | cytosol, nucleus, plastid | 74.46 | 86.75 |
| CDY59721 | Canola | extracellular | 85.41 | 86.52 |
| AT4G36350.1 | Thale cress | extracellular | 86.48 | 86.48 |
| CDY59690 | Canola | extracellular | 85.19 | 86.3 |
| CDY24789 | Canola | extracellular | 84.12 | 85.4 |
| Bra010554.1-P | Field mustard | extracellular | 83.91 | 85.19 |
| AT1G52940.1 | Thale cress | cytosol | 38.63 | 74.38 |
| PGSC0003DMT400067268 | Potato | cytosol | 62.23 | 70.9 |
| AT2G18130.1 | Thale cress | extracellular | 65.67 | 69.39 |
| Solyc07g053070.1.1 | Tomato | extracellular | 66.95 | 68.42 |
| AT3G46120.1 | Thale cress | extracellular | 56.65 | 68.04 |
| Bra017755.1-P | Field mustard | cytosol, nucleus, peroxisome | 71.03 | 59.64 |
| AT2G16430.2 | Thale cress | extracellular, golgi, vacuole | 59.23 | 58.97 |
| AT2G27190.1 | Thale cress | extracellular, golgi | 59.01 | 58.64 |
| AT5G34850.1 | Thale cress | extracellular | 51.93 | 50.95 |
| AT3G52820.1 | Thale cress | extracellular | 35.62 | 38.25 |
| AT3G20500.1 | Thale cress | extracellular | 35.84 | 38.22 |
| AT3G52810.1 | Thale cress | extracellular, golgi | 34.98 | 37.3 |
| AT3G52780.1 | Thale cress | extracellular | 33.69 | 36.77 |
| AT4G13700.1 | Thale cress | extracellular | 28.97 | 29.48 |
| AT2G32770.3 | Thale cress | extracellular | 33.91 | 28.99 |
| AT3G07130.2 | Thale cress | extracellular | 33.69 | 27.79 |
| AT1G13750.1 | Thale cress | extracellular, plasma membrane, vacuole | 23.61 | 17.94 |
| AT5G50400.1 | Thale cress | extracellular | 23.18 | 17.68 |
| AT4G24890.1 | Thale cress | vacuole | 22.32 | 16.91 |
| AT2G03450.1 | Thale cress | extracellular, plasma membrane, vacuole | 23.18 | 16.59 |
| AT1G13900.1 | Thale cress | plasma membrane | 22.96 | 16.31 |
Protein Annotations
| Gene3D:2.60.40.380 | Gene3D:3.60.21.10 | MapMan:35.1 | EntrezGene:842090 | UniProt:A0A178WA73 | ProteinID:AAG50924.1 |
| ProteinID:AAG51511.1 | ProteinID:AEE33383.1 | ArrayExpress:AT1G56360 | EnsemblPlantsGene:AT1G56360 | RefSeq:AT1G56360 | TAIR:AT1G56360 |
| RefSeq:AT1G56360-TAIR-G | EnsemblPlants:AT1G56360.1 | TAIR:AT1G56360.1 | EMBL:AY842022 | Unigene:At.51194 | EMBL:BT026359 |
| InterPro:Calcineurin-like_PHP_ApaH | EMBL:DQ446366 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003993 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016311 |
| GO:GO:0016787 | GO:GO:0046872 | InterPro:IPR008963 | InterPro:IPR029052 | InterPro:Metallo-depent_PP-like | RefSeq:NP_176033.1 |
| ProteinID:OAP15096.1 | Symbol:PAP6 | PFAM:PF00149 | PFAM:PF14008 | PFAM:PF16656 | PO:PO:0000013 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0025022 |
| PANTHER:PTHR22953 | PANTHER:PTHR22953:SF84 | InterPro:Purple_acid_PPase_C_dom | InterPro:Purple_acid_Pase-like_N | InterPro:Purple_acid_Pase_N | UniProt:Q9C510 |
| SUPFAM:SSF49363 | SUPFAM:SSF56300 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI00000AA802 | : |
Description
PAP6Purple acid phosphatase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9C510]
Coordinates
chr1:-:21098603..21100842
Molecular Weight (calculated)
52832.9 Da
IEP (calculated)
6.897
GRAVY (calculated)
-0.405
Length
466 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNLVIFAFL FLSITTVING GITSKFVRQA LPSIEMSLDT FPSPGGYNTP EQVHLTQGDH DGRGMIVSWV TPLNLAGSNV VTYWIATNGS DVKPAKKRAH
101: ASTKSYRFYD YSSGFLHHAT IKGLEYDTKY IYEVGTDKSV RQFSFTTPPK IGPDVPYTFG IIGDLGQTYA SNETLYHYMS NPKGQAVLFA GDLSYADDHP
201: NHDQRKWDTW GRFMEPCAAY QPFIFAAGNH EIDFVPNIGE PHAFKPYTHR YPNAYKASQS TSPLWYSVRR ASAHIIVLSS YSAYGKYTPQ YIWLEQELKN
301: VNREETPWLI VIVHSPWYNS NNYHYMEGES MRVMFESWLV NSKVDLVLSG HVHAYERSER ISNIKYNITN GLSSPVKDPN APIYITIGDG GNIEGIANSF
401: VDPQPSYSAY REASFGHAVL EIMNRTHAQY TWHRNQDNEP VAADSIMLHN RHFFPVEEIV SSNIRA
101: ASTKSYRFYD YSSGFLHHAT IKGLEYDTKY IYEVGTDKSV RQFSFTTPPK IGPDVPYTFG IIGDLGQTYA SNETLYHYMS NPKGQAVLFA GDLSYADDHP
201: NHDQRKWDTW GRFMEPCAAY QPFIFAAGNH EIDFVPNIGE PHAFKPYTHR YPNAYKASQS TSPLWYSVRR ASAHIIVLSS YSAYGKYTPQ YIWLEQELKN
301: VNREETPWLI VIVHSPWYNS NNYHYMEGES MRVMFESWLV NSKVDLVLSG HVHAYERSER ISNIKYNITN GLSSPVKDPN APIYITIGDG GNIEGIANSF
401: VDPQPSYSAY REASFGHAVL EIMNRTHAQY TWHRNQDNEP VAADSIMLHN RHFFPVEEIV SSNIRA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.