Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71707 | Canola | extracellular | 80.58 | 73.58 |
| Bra039919.1-P | Field mustard | extracellular | 87.19 | 45.97 |
| CDY46314 | Canola | extracellular | 87.19 | 45.97 |
| Bra037236.1-P | Field mustard | extracellular | 85.95 | 44.54 |
| CDY30328 | Canola | extracellular | 85.95 | 44.54 |
| CDY53278 | Canola | extracellular | 84.71 | 43.9 |
| AT2G18130.1 | Thale cress | extracellular | 78.1 | 42.86 |
| AT4G36350.1 | Thale cress | extracellular | 75.21 | 39.06 |
| AT1G56360.1 | Thale cress | extracellular | 74.38 | 38.63 |
| AT3G46120.1 | Thale cress | extracellular | 60.33 | 37.63 |
| PGSC0003DMT400067268 | Potato | cytosol | 60.74 | 35.94 |
| Solyc07g053070.1.1 | Tomato | extracellular | 63.64 | 33.77 |
| AT2G27190.1 | Thale cress | extracellular, golgi | 61.98 | 31.98 |
| AT2G16430.2 | Thale cress | extracellular, golgi, vacuole | 58.26 | 30.13 |
| AT5G34850.1 | Thale cress | extracellular | 51.65 | 26.32 |
| AT3G52780.1 | Thale cress | extracellular | 33.06 | 18.74 |
| AT3G52820.1 | Thale cress | extracellular | 33.06 | 18.43 |
| AT3G20500.1 | Thale cress | extracellular | 32.64 | 18.08 |
| AT3G52810.1 | Thale cress | extracellular, golgi | 31.82 | 17.62 |
| AT4G13700.1 | Thale cress | extracellular | 29.34 | 15.5 |
| AT2G32770.3 | Thale cress | extracellular | 31.41 | 13.95 |
| AT3G07130.2 | Thale cress | extracellular | 28.51 | 12.21 |
| AT5G50400.1 | Thale cress | extracellular | 23.97 | 9.49 |
| AT1G13750.1 | Thale cress | extracellular, plasma membrane, vacuole | 23.97 | 9.46 |
| AT4G24890.1 | Thale cress | vacuole | 22.73 | 8.94 |
| AT1G13900.1 | Thale cress | plasma membrane | 20.66 | 7.62 |
| AT2G03450.1 | Thale cress | extracellular, plasma membrane, vacuole | 20.25 | 7.53 |
Protein Annotations
| Gene3D:2.60.40.380 | Gene3D:3.60.21.10 | MapMan:35.1 | EntrezGene:841727 | UniProt:A0A2H1ZED5 | ProteinID:AEE32870.2 |
| ArrayExpress:AT1G52940 | EnsemblPlantsGene:AT1G52940 | RefSeq:AT1G52940 | TAIR:AT1G52940 | RefSeq:AT1G52940-TAIR-G | EnsemblPlants:AT1G52940.1 |
| TAIR:AT1G52940.1 | InterPro:Calcineurin-like_PHP_ApaH | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003993 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016311 | GO:GO:0016787 | GO:GO:0046872 |
| InterPro:IPR008963 | InterPro:IPR029052 | InterPro:Metallo-depent_PP-like | RefSeq:NP_001319211.1 | Symbol:PAP5 | PFAM:PF00149 |
| PFAM:PF16656 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009025 | PO:PO:0009046 | PO:PO:0009047 |
| PANTHER:PTHR22953 | PANTHER:PTHR22953:SF84 | InterPro:Purple_acid_Pase-like_N | InterPro:Purple_acid_Pase_N | SUPFAM:SSF49363 | SUPFAM:SSF56300 |
| UniParc:UPI0000D642F3 | : | : | : | : | : |
Description
PAP5purple acid phosphatase 5 [Source:TAIR;Acc:AT1G52940]
Coordinates
chr1:+:19716402..19723725
Molecular Weight (calculated)
27292.5 Da
IEP (calculated)
6.512
GRAVY (calculated)
-0.558
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLETFPPPA GYNAPEQVHI TQGDHNGRGM IISWVTSLNE DGSNVVTYWI ASSDGSDNKS VIATTSSYRY FDYTSGYLHH AIIKELEYKT KYFYELGTGR
101: STRQFNLTPP KVGPDVPYTF GVIGDLGQTY ASNQTLYNYM SNPKGQAVLF AGDLSYADDH PNHDQSKWDS YGRFVEPSAA YQPWIWAAGN HEIDYAQSIG
201: ETQPFKPYKN RYHVPYRASQ STSPLWYSIK RASAYIIILS SL
101: STRQFNLTPP KVGPDVPYTF GVIGDLGQTY ASNQTLYNYM SNPKGQAVLF AGDLSYADDH PNHDQSKWDS YGRFVEPSAA YQPWIWAAGN HEIDYAQSIG
201: ETQPFKPYKN RYHVPYRASQ STSPLWYSIK RASAYIIILS SL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.