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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 6
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400042708 Potato extracellular, golgi, vacuole 88.65 89.93
KRH18439 Soybean extracellular 51.42 68.4
AT4G13700.1 Thale cress extracellular 62.41 38.43
VIT_05s0051g00640.t01 Wine grape cytosol 67.73 36.38
KRG93588 Soybean extracellular 71.63 34.41
GSMUA_Achr1P06520_001 Banana extracellular 63.83 32.55
Bra040347.1-P Field mustard extracellular 63.12 32.54
CDY43698 Canola extracellular 63.12 32.54
CDY18729 Canola extracellular 64.54 31.43
HORVU5Hr1G055570.4 Barley cytosol, extracellular 43.62 28.67
HORVU5Hr1G044460.3 Barley extracellular, mitochondrion, plasma membrane 54.61 26.19
Solyc09g091910.1.1 Tomato extracellular 51.06 25.95
TraesCS5D01G186700.1 Wheat extracellular, golgi, mitochondrion, plastid, vacuole 54.61 25.58
TraesCS5A01G182300.1 Wheat extracellular, golgi, mitochondrion, plastid, vacuole 54.26 25.21
TraesCS5B01G180300.1 Wheat extracellular, golgi, mitochondrion, plastid, vacuole 53.9 25.17
Zm00001d050026_P006 Maize extracellular, mitochondrion, plasma membrane, vacuole 52.48 24.38
Os08t0280100-01 Rice extracellular 52.84 23.95
OQU80197 Sorghum mitochondrion 53.9 23.82
Solyc10g006300.2.1 Tomato extracellular, golgi, vacuole 25.18 16.21
Solyc07g064500.2.1 Tomato extracellular 24.82 16.05
Solyc09g009610.1.1 Tomato extracellular 23.76 15.76
Solyc09g009600.1.1 Tomato endoplasmic reticulum, vacuole 23.76 15.19
Solyc12g009800.1.1 Tomato extracellular 22.7 13.42
Solyc01g110060.2.1 Tomato nucleus 21.99 13.33
Solyc01g110050.1.1 Tomato cytosol 20.21 13.19
Solyc07g007670.2.1 Tomato extracellular 21.99 13.0
Solyc04g080920.1.1 Tomato extracellular 20.21 12.1
Solyc07g053070.1.1 Tomato extracellular 18.79 11.62
Solyc07g008550.2.1 Tomato nucleus 18.44 8.31
Solyc07g008560.2.1 Tomato extracellular 18.44 8.18
Solyc07g008570.2.1 Tomato extracellular, plasma membrane 18.09 8.1
Solyc08g083250.2.1 Tomato extracellular 17.38 8.06
Solyc05g012260.2.1 Tomato nucleus 16.31 7.59
Solyc04g005450.2.1 Tomato nucleus 17.38 7.56
Solyc01g068380.2.1 Tomato extracellular 16.31 7.2
Solyc04g024640.1.1 Tomato cytosol 3.9 4.89
Solyc04g051650.2.1 Tomato cytosol 1.77 1.85
Protein Annotations
Gene3D:2.60.40.380Gene3D:3.60.21.10MapMan:35.1GO:GO:0003674GO:GO:0003824GO:GO:0003993
GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016311GO:GO:0016787
GO:GO:0046872InterPro:IPR008963InterPro:IPR029052UniProt:K4BSC3InterPro:Metallo-depent_PP-likePFAM:PF16656
PANTHER:PTHR22953PANTHER:PTHR22953:SF91InterPro:Purple_acid_Pase-like_NInterPro:Purple_acid_Pase_NSUPFAM:SSF49363SignalP:SignalP-noTM
EnsemblPlantsGene:Solyc04g051640.2EnsemblPlants:Solyc04g051640.2.1UniParc:UPI0002767189:::
Description
No Description!
Coordinates
chr4:+:50942687..50945781
Molecular Weight (calculated)
31904.4 Da
IEP (calculated)
6.598
GRAVY (calculated)
-0.168
Length
282 amino acids
Sequence
(BLAST)
001: MKKICTTLWL QFFVVIIFAK RIPTTLDGPF EPVTHRFDPL LHKGSDDLPM DHPRLKRNVT SFFPEQIALA LSTNSSSMWI SWITGEAQIG LNVTPHDPET
101: VASEVWYGKE SGKYTMKQNG VSVVYSQLYP FEGLWNYSSG IIHHVKIDGL EPETKYYYKC GDSSLAAMSD ELEFETFPLP APNKYPRRIA VVGDLGLTSN
201: TTTTIDHLIM NDPSMILMVG DLTYANQYLT TGGKGASCYS CQFPDAPIRE TFQPRWDGWG GYIVVIKRNL LLNIILHMPM RH
Best Arabidopsis Sequence Match ( AT4G13700.2 )
(BLAST)
001: MTLLIMITLT SISLLLAAAE TIPTTLDGPF KPLTRRFEPS LRRGSDDLPM DHPRLRKRNV SSDFPEQIAL ALSTPTSMWV SWVTGDAIVG KDVKPLDPSS
101: IASEVWYGKE KGNYMLKKKG NATVYSQLYP SDGLLNYTSG IIHHVLIDGL EPETRYYYRC GDSSVPAMSE EISFETLPLP SKDAYPHRIA FVGDLGLTSN
201: TTTTIDHLME NDPSLVIIVG DLTYANQYRT IGGKGVPCFS CSFPDAPIRE TYQPRWDAWG RFMEPLTSKV PTMVIEGNHE IEPQASGITF KSYSERFAVP
301: ASESGSNSNF YYSFDAGGVH FVMLGAYVDY NNTGLQYAWL KEDLSKVDRA VTPWLVATMH PPWYNSYSSH YQEFECMRQE MEELLYQYRV DIVFAGHVSS
401: QIILVKKSFD TL
Arabidopsis Description
ATPAP23purple acid phosphatase 23 [Source:TAIR;Acc:AT4G13700]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.