Factsheet for PGSC0003DMT400042708

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

nucleus 1
extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g051640.2.1	Tomato	extracellular, golgi	89.93	88.65
KRH18439	Soybean	extracellular	51.8	67.92
PGSC0003DMT400080118	Potato	extracellular	92.81	46.49
PGSC0003DMT400042711	Potato	extracellular	77.34	44.33
AT4G13700.1	Thale cress	extracellular	63.31	38.43
KRG93588	Soybean	extracellular	72.66	34.41
GSMUA_Achr1P06520_001	Banana	extracellular	64.75	32.55
CDY43698	Canola	extracellular	63.67	32.36
Bra040347.1-P	Field mustard	extracellular	63.67	32.36
CDY18729	Canola	extracellular	65.11	31.26
HORVU5Hr1G055570.4	Barley	cytosol, extracellular	45.32	29.37
HORVU5Hr1G044460.3	Barley	extracellular, mitochondrion, plasma membrane	56.47	26.7
PGSC0003DMT400080377	Potato	extracellular	52.88	26.49
TraesCS5D01G186700.1	Wheat	extracellular, golgi, mitochondrion, plastid, vacuole	56.47	26.08
TraesCS5A01G182300.1	Wheat	extracellular, golgi, mitochondrion, plastid, vacuole	56.12	25.7
TraesCS5B01G180300.1	Wheat	extracellular, golgi, mitochondrion, plastid, vacuole	55.76	25.66
Zm00001d050026_P006	Maize	extracellular, mitochondrion, plasma membrane, vacuole	53.96	24.71
Os08t0280100-01	Rice	extracellular	53.96	24.12
OQU80197	Sorghum	mitochondrion	55.04	23.98
PGSC0003DMT400006837	Potato	endoplasmic reticulum, vacuole	25.9	16.25
PGSC0003DMT400006955	Potato	extracellular	24.82	16.24
PGSC0003DMT400037292	Potato	extracellular	25.18	16.13
PGSC0003DMT400057204	Potato	extracellular	24.82	15.83
PGSC0003DMT400009625	Potato	cytosol	20.86	13.81
PGSC0003DMT400020276	Potato	extracellular	22.3	13.0
PGSC0003DMT400079528	Potato	vacuole	21.94	12.98
PGSC0003DMT400079523	Potato	extracellular	21.58	12.9
PGSC0003DMT400067268	Potato	cytosol	17.99	12.22
PGSC0003DMT400046260	Potato	extracellular, plasma membrane, vacuole	15.47	7.86
PGSC0003DMT400031890	Potato	endoplasmic reticulum, extracellular, vacuole	16.91	7.73
PGSC0003DMT400023440	Potato	extracellular	15.83	7.2
PGSC0003DMT400007401	Potato	extracellular, plasma membrane	16.55	7.09
PGSC0003DMT400072925	Potato	extracellular	15.11	6.87
PGSC0003DMT400059161	Potato	cytosol	3.6	2.84
Solyc04g051650.2.1	Tomato	cytosol	1.08	1.11

Protein Annotations

Gene3D:2.60.40.380	Gene3D:3.60.21.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0003993
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787
GO:GO:0046872	InterPro:IPR008963	InterPro:IPR029052	UniProt:M1BDJ1	InterPro:Metallo-depent_PP-like	PFAM:PF16656
EnsemblPlantsGene:PGSC0003DMG401016574	PGSC:PGSC0003DMG401016574	EnsemblPlants:PGSC0003DMT400042708	PANTHER:PTHR22953	PANTHER:PTHR22953:SF91	InterPro:Purple_acid_Pase-like_N
InterPro:Purple_acid_Pase_N	SUPFAM:SSF49363	SignalP:SignalP-noTM	UniParc:UPI00029525CF	SEG:seg	:

Description

Phytase [Source:PGSC_GENE;Acc:PGSC0003DMG401016574]

Coordinates

chr4:+:54489182..54492141

Molecular Weight (calculated)

31305.5 Da

IEP (calculated)

7.561

GRAVY (calculated)

-0.184

Length

278 amino acids

Sequence
(BLAST)

001: MKKICSALWL QFFVVIIVAK RIPTTLDGPF KPLTHRFDPL LHKGSDDLPM DHSRLKRNVT SFFPEQIALA LSTSSSSMWI SWITGEAQIG LNVTPHDPKT
101: VASEVWYGKE SGKYTMKQNG VSVVYSQLYP FEGLWNYTSG IIHHVKIDGL EPETKYYYKC GDSSLVAMSD ELAFETFPLP APNKYPRRIA VVGDLGLTSN
201: TTTTIDHLIM NDPSMILMVG DLTYANQYLT TGGKGASCYS CQFPDAPIRE TFQPRWDGWG RCEVRVDASY TIHRVFVK

Best Arabidopsis Sequence Match ( AT2G32770.1 )
(BLAST)

001: MVVKYTMSMS FFVIFASTVT IIVHGFPSTL DGPLNPVTAP LDPNLNPIAF DLPESDPSFV KPISEFLLPE QISVSLSYSF DSVWISWVTG EYQIGEKDSA
101: PLDPNCVQSI VQYREFDVRR TRKQNATGHS IVYNQQYSSE NGFMNYTSGI IHHVQLTGLK PNTLYRYQCG DPSLSAMSKE YYFRTMPKST SENYPHRIVV
201: AGDLGLTYNT STVLGHILSN HPDLVVLLGG FSYADTYLAN KTKLDCSSCH CDQNGTSSDC GSCYSSGETY QPRWDYWGRF MEPLTANVPT MMVAGEHEIE
301: PQTENNLTFA AYSSRFAFPS NESADQYIWL ESDLIKINRS ETPWVVATWS LPWYSTFKGH YREAESMRIH LEDLLYNYRV DIVFNSHVDA YERSNRVYNY
401: TLDQCGPVYI TTGAGGAGKL ETQHVDDPGN IPDPSQNYSC RSSGLNSTLE PVKDETCPVK QPEYSAYRES SFGFGILEVK NETHALWSWN RNQDLYYLAA
501: DVIHIVRQPE MCSVCN

Arabidopsis Description

PAP13Purple acid phosphatase 13 [Source:UniProtKB/Swiss-Prot;Acc:O48840]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.