Factsheet for PGSC0003DMT400042711

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
mitochondrion 2
extracellular 3
nucleus 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	extracellular, nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400080118	Potato	extracellular	98.76	86.31
PGSC0003DMT400042708	Potato	extracellular, golgi, vacuole	44.33	77.34
VIT_05s0051g00640.t01	Wine grape	cytosol	80.62	74.48
HORVU5Hr1G055570.4	Barley	cytosol, extracellular	64.95	73.43
Bra040347.1-P	Field mustard	extracellular	74.85	66.36
CDY43698	Canola	extracellular	74.85	66.36
AT4G13700.1	Thale cress	extracellular	61.86	65.5
GSMUA_Achr1P06520_001	Banana	extracellular	74.23	65.1
CDY18729	Canola	extracellular	75.46	63.21
HORVU5Hr1G044460.3	Barley	extracellular, mitochondrion, plasma membrane	71.75	59.18
TraesCS5D01G186700.1	Wheat	extracellular, golgi, mitochondrion, plastid, vacuole	71.75	57.81
TraesCS5A01G182300.1	Wheat	extracellular, golgi, mitochondrion, plastid, vacuole	72.16	57.66
TraesCS5B01G180300.1	Wheat	extracellular, golgi, mitochondrion, plastid, vacuole	70.93	56.95
Zm00001d050026_P006	Maize	extracellular, mitochondrion, plasma membrane, vacuole	70.52	56.34
PGSC0003DMT400080377	Potato	extracellular	63.51	55.5
Os08t0280100-01	Rice	extracellular	70.72	55.14
OQU80197	Sorghum	mitochondrion	70.93	53.92
PGSC0003DMT400037292	Potato	extracellular	37.94	42.4
PGSC0003DMT400006955	Potato	extracellular	37.11	42.35
PGSC0003DMT400057204	Potato	extracellular	37.73	41.97
PGSC0003DMT400006837	Potato	endoplasmic reticulum, vacuole	37.53	41.08
PGSC0003DMT400067268	Potato	cytosol	32.16	38.14
PGSC0003DMT400009625	Potato	cytosol	30.52	35.24
PGSC0003DMT400079523	Potato	extracellular	31.96	33.33
PGSC0003DMT400079528	Potato	vacuole	32.16	33.19
PGSC0003DMT400020276	Potato	extracellular	31.34	31.87
PGSC0003DMT400031890	Potato	endoplasmic reticulum, extracellular, vacuole	22.68	18.09
PGSC0003DMT400007401	Potato	extracellular, plasma membrane	23.09	17.26
PGSC0003DMT400059161	Potato	cytosol	12.37	17.05
PGSC0003DMT400023440	Potato	extracellular	20.21	16.04
PGSC0003DMT400072925	Potato	extracellular	20.21	16.04
PGSC0003DMT400046260	Potato	extracellular, plasma membrane, vacuole	15.26	13.53

Protein Annotations

Gene3D:2.60.40.380	MapMan:35.1	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674	GO:GO:0003824	GO:GO:0003993
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787
GO:GO:0046872	InterPro:IPR008963	UniProt:M1BDJ4	PFAM:PF00149	PFAM:PF14008	PFAM:PF16656
EnsemblPlantsGene:PGSC0003DMG402016574	PGSC:PGSC0003DMG402016574	EnsemblPlants:PGSC0003DMT400042711	PANTHER:PTHR22953	PANTHER:PTHR22953:SF91	InterPro:Purple_acid_PPase_C_dom
InterPro:Purple_acid_Pase-like_N	InterPro:Purple_acid_Pase_N	SUPFAM:SSF49363	SUPFAM:SSF56300	UniParc:UPI00029584FF	SEG:seg

Description

Nucleotide pyrophosphatase/phosphodiesterase [Source:PGSC_GENE;Acc:PGSC0003DMG402016574]

Coordinates

chr4:+:54489202..54494378

Molecular Weight (calculated)

55007.5 Da

IEP (calculated)

5.632

GRAVY (calculated)

-0.446

Length

485 amino acids

Sequence
(BLAST)

001: MDHSRLKRNV TSFFPEQIAL ALSTSSSSMW ISWITGEAQI GLNVTPHDPK TVASEVWYGK ESGKYTMKQN GVSVVYSQLY PFEGLWNYTS GIIHHVKIDG
101: LEPETKYYYK CGDSSLVAMS DELAFETFPL PAPNKYPRRI AVVGDLGLTS NTTTTIDHLI MNDPSMILMV GDLTYANQYL TTGGKGASCY SCQFPDAPIR
201: ETFQPRWDGW GRFMEPLISR VPMMVIEGNH EIEPQAAGLI FQSYLTRYSV PSKESGSNSN LYYSFNAGGI HFIMLGAYVD YNQTSAQYSW LQHDLEKVDR
301: GVTPWLVAAW HSPWYNSYSS HYQEFECMRQ EMEEMLYTYR VDIVFSGHVH AYERMNRVYN YTLDPCGPVY ITVGDGGNIE KVDADHADDP GKCPSPGDNI
401: PEFGGVCHMN FSSGPAKGKF CWDRQPEWSA YRESSFGHGI LEMVNSTHAL WTWHRNQDIY RENSHGDQLY IVRQPHTCSV DSKTG

Best Arabidopsis Sequence Match ( AT4G13700.1 )
(BLAST)

001: MTLLIMITLT SISLLLAAAE TIPTTLDGPF KPLTRRFEPS LRRGSDDLPM DHPRLRKRNV SSDFPEQIAL ALSTPTSMWV SWVTGDAIVG KDVKPLDPSS
101: IASEVWYGKE KGNYMLKKKG NATVYSQLYP SDGLLNYTSG IIHHVLIDGL EPETRYYYRC GDSSVPAMSE EISFETLPLP SKDAYPHRIA FVGDLGLTSN
201: TTTTIDHLME NDPSLVIIVG DLTYANQYRT IGGKGVPCFS CSFPDAPIRE TYQPRWDAWG RFMEPLTSKV PTMVIEGNHE IEPQASGITF KSYSERFAVP
301: ASESGSNSNF YYSFDAGGVH FVMLGAYVDY NNTGLQYAWL KEDLSKVDRA VTPWLVATMH PPWYNSYSSH YQEFECMRQE MEELLYQYRV DIVFAGHVHA
401: YERMNRIYNY TLDPCGPVYI TIGDGGNIEK VDVDFADDPG KCHSSYDLFF FNSLNLSN

Arabidopsis Description

ATPAP23purple acid phosphatase 23 [Source:TAIR;Acc:AT4G13700]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.