Factsheet for PGSC0003DMT400059161

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g008570.2.1	Tomato	extracellular, plasma membrane	65.06	36.35
Solyc07g008550.2.1	Tomato	nucleus	63.92	35.94
Solyc07g008560.2.1	Tomato	extracellular	64.49	35.69
PGSC0003DMT400031890	Potato	endoplasmic reticulum, extracellular, vacuole	53.98	31.25
PGSC0003DMT400072925	Potato	extracellular	50.57	29.13
PGSC0003DMT400023440	Potato	extracellular	48.86	28.15
PGSC0003DMT400006955	Potato	extracellular	17.9	14.82
PGSC0003DMT400037292	Potato	extracellular	18.18	14.75
PGSC0003DMT400067268	Potato	cytosol	17.05	14.67
PGSC0003DMT400057204	Potato	extracellular	17.9	14.45
PGSC0003DMT400006837	Potato	endoplasmic reticulum, vacuole	17.61	14.0
PGSC0003DMT400079528	Potato	vacuole	18.47	13.83
PGSC0003DMT400079523	Potato	extracellular	17.05	12.9
PGSC0003DMT400020276	Potato	extracellular	17.05	12.58
PGSC0003DMT400042711	Potato	extracellular	17.05	12.37
PGSC0003DMT400009625	Potato	cytosol	14.2	11.9
PGSC0003DMT400007401	Potato	extracellular, plasma membrane	21.88	11.86
PGSC0003DMT400046260	Potato	extracellular, plasma membrane, vacuole	17.9	11.52
PGSC0003DMT400080377	Potato	extracellular	17.9	11.35
PGSC0003DMT400080118	Potato	extracellular	17.33	10.99
PGSC0003DMT400042708	Potato	extracellular, golgi, vacuole	2.84	3.6

Protein Annotations

Gene3D:3.60.21.10	MapMan:35.1	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003993	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016311
GO:GO:0016787	GO:GO:0043531	InterPro:IPR029052	UniProt:M1C3W2	InterPro:Metallo-depent_PP-like	InterPro:NB-ARC
InterPro:P-loop_NTPase	PFAM:PF00149	PFAM:PF00931	EnsemblPlantsGene:PGSC0003DMG400022980	PGSC:PGSC0003DMG400022980	EnsemblPlants:PGSC0003DMT400059161
PANTHER:PTHR22953	PANTHER:PTHR22953:SF24	SUPFAM:SSF52540	SUPFAM:SSF56300	UniParc:UPI000294CCBD	SEG:seg

Description

Hydrolase [Source:PGSC_GENE;Acc:PGSC0003DMG400022980]

Coordinates

chr7:-:5931602..5939165

Molecular Weight (calculated)

40941.8 Da

IEP (calculated)

5.675

GRAVY (calculated)

-0.567

Length

352 amino acids

Sequence
(BLAST)

001: MTTDTLIDDL DNIDAVFLIG DLPYANGYIS QWDYCASRVN NIEGIASGNH ERTWENSGSI HNGLDSGGEC GVPAETLYYV PAENRAKFSY AADYGMFHFC
101: IADTEHDWRE GSEQYKFIEQ CFASANRHKQ PWLIFAAHRV LGYSSNEWYA KEGPFEEPIG REHLQKLWQK YKVDMAFYRH VHNYERVCPI YQNQCVNKET
201: SHYSGVVNGT IHVVVGGGGA HLNRFTTINT TWSVFKDYDL LDDIVEFTDE KHIEQLAEML YKRLRFNRYL IVLDDVWTTD HIERCLSDDK NGSQILLTTR
301: LMNVAKSNSP PYCLRFLDSE ESWELLRHRV FGRKYDHPEL GRRLQNNAKD YL

Best Arabidopsis Sequence Match ( AT1G13750.1 )
(BLAST)

001: MRESLVAILV TVISVLGAIH QVKSHEDQPL SGIAVHKITF GLNEKAYVKA SPTVLGSNGQ HSELVLVQYS SPKPSDDDWI GVFSPADFNA STCPGDNKMV
101: QPPRLCSAPV KFQYANFSNP RYTNTGTGSL KLQLINQRSD FSFALFSGGL LNPKLVAISN KVAFENPNAP VYPRLALGKE WDEMTVTWTS GYGLNLAEPV
201: VEWGVKGGER KLSPAGTLTF ARNSMCGAPA RTVGWRDPGY IHTAFLKELW PNSKYTYRVG HRLSNGALIW SKEYQFKSSP FPGQNSVQQV VIFGDMGKAE
301: VDGSSEYNDF QRASLNTTKQ LIKDLKKTDA VFHIGDICYA NGYLSQWDQF IAQIEPIAST VPYMIASGNH ERVWPNSGSF YEGLDSGGEC GVPAETMFYV
401: PAQNRAKVWY SSDYGMFRFC VADTEHDWRE GTEQYNFIEH CLASVDRQKQ PWLIFLAHRV LGYSSTYFYA EEGSFAEPMG RESLQKLWQK YKVDIAIYGH
501: AHNYERTCPV YQSVCTSHEK SNYKAPLNGT IHIVAGGGGA GLAEFSDLQP NWSLFRDYDY GFLKLTAIDH SNLLFEYKKS SDGRVHDSFT ISKDYRDILA
601: CAVDSCPATT LAS

Arabidopsis Description

PAP1Probable inactive purple acid phosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMX4]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.