Factsheet for Solyc12g009800.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
mitochondrion 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, nucleus, peroxisome, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, nucleus
Predotar:	secretory
PProwler:	secretory
PTS1:	peroxisome
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

extracellular: 26583031
extracellular: 28847647
extracellular: 29876421

msms PMID: 26583031 doi

F Gawehns, L Ma, O Bruning, PM Houterman, S Boeren, BJ Cornelissen, M Rep, FL Takken

Laboratory of Biochemistry, Wageningen University Wageningen, Netherlands., Molecular Plant Pathology, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands., RNA Biology and Applied Bioinformatics Research Group and MAD: Dutch Genomics Service and Support Provider, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands.

msms PMID: 28847647 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA. Electronic address: jabadia@eead.csic.es.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400020276	Potato	extracellular	97.48	97.48
Solyc07g007670.2.1	Tomato	extracellular	77.36	77.36
VIT_11s0118g00240.t01	Wine grape	extracellular, plasma membrane	74.84	73.61
AT5G34850.1	Thale cress	extracellular	72.12	72.42
CDY12397	Canola	extracellular	71.28	71.58
Bra038946.1-P	Field mustard	extracellular	71.91	71.46
CDY47560	Canola	extracellular	71.7	71.25
Zm00001d046593_P001	Maize	extracellular	68.34	68.49
KXG20468	Sorghum	extracellular	68.34	68.49
KRH20185	Soybean	nucleus	67.92	68.21
TraesCS7A01G517900.1	Wheat	unclear	68.13	68.13
TraesCS7B01G434100.1	Wheat	unclear	67.92	67.92
HORVU7Hr1G115510.1	Barley	extracellular	67.92	67.92
Os06t0643900-01	Rice	extracellular	67.51	67.65
TraesCS7D01G507900.1	Wheat	extracellular	67.3	67.3
KRH03620	Soybean	endoplasmic reticulum	72.12	67.19
GSMUA_Achr3P13260_001	Banana	extracellular	65.2	66.45
GSMUA_Achr1P26030_001	Banana	extracellular	65.83	64.88
TraesCS7B01G434000.1	Wheat	extracellular, plastid	64.15	62.2
Solyc01g110050.1.1	Tomato	cytosol	52.41	57.87
Solyc01g110060.2.1	Tomato	nucleus	55.14	56.56
Solyc07g053070.1.1	Tomato	extracellular	49.69	51.97
Solyc04g080920.1.1	Tomato	extracellular	50.73	51.38
Solyc09g009610.1.1	Tomato	extracellular	36.69	41.18
Solyc07g064500.2.1	Tomato	extracellular	36.27	39.68
Solyc10g006300.2.1	Tomato	extracellular, golgi, vacuole	35.22	38.36
Solyc09g009600.1.1	Tomato	endoplasmic reticulum, vacuole	35.22	38.1
Solyc04g051650.2.1	Tomato	cytosol	19.71	34.69
Solyc09g091910.1.1	Tomato	extracellular	33.33	28.65
Solyc04g024640.1.1	Tomato	cytosol	11.11	23.56
Solyc04g051640.2.1	Tomato	extracellular, golgi	13.42	22.7
Solyc05g012260.2.1	Tomato	nucleus	24.74	19.47
Solyc08g083250.2.1	Tomato	extracellular	22.85	17.93
Solyc07g008550.2.1	Tomato	nucleus	23.27	17.73
Solyc07g008560.2.1	Tomato	extracellular	23.06	17.3
Solyc07g008570.2.1	Tomato	extracellular, plasma membrane	22.64	17.14
Solyc04g005450.2.1	Tomato	nucleus	23.06	16.98
Solyc01g068380.2.1	Tomato	extracellular	22.64	16.9

Protein Annotations

Gene3D:2.60.40.380	Gene3D:3.60.21.10	MapMan:35.1	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674	GO:GO:0003824
GO:GO:0003993	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016311
GO:GO:0016787	GO:GO:0046872	InterPro:IPR008963	InterPro:IPR029052	UniProt:K4DC68	InterPro:Metallo-depent_PP-like
PFAM:PF00149	PFAM:PF14008	PFAM:PF16656	PANTHER:PTHR22953	PANTHER:PTHR22953:SF55	InterPro:Purple_acid_PPase_C_dom
InterPro:Purple_acid_Pase-like_N	InterPro:Purple_acid_Pase_N	SUPFAM:SSF49363	SUPFAM:SSF56300	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc12g009800.1
EnsemblPlants:Solyc12g009800.1.1	UniParc:UPI0002769B33	SEG:seg	:	:	:

Description

Purple acid phosphatase [Source:UniProtKB/TrEMBL;Acc:K4DC68]

Coordinates

chr12:-:3005117..3008886

Molecular Weight (calculated)

55296.8 Da

IEP (calculated)

8.552

GRAVY (calculated)

-0.496

Length

477 amino acids

Sequence
(BLAST)

001: MLLHLFFSLF VFFTLIDNGN AGVTSSFVRK EFPAVDIPLD NEVFAVPKGY NAPQQVHITQ GDYEGKSVIV SWVTPDKPGS SEVRYGLSKG KYDFTAKGSF
101: TNYTFYTYKS GYIHKCFLNG LQYDTKYYYE IGNGDSARNF WFETPPKVDP DASYTFGIIG DLGQTYNSLS TLQHYMSSGA KSVLFVGDLS YADRYKYHDV
201: GVRWDSWGRF VEPSTAYQPW IWNTGNHEIE YMPYMGEVTM FKSYLYRYPT PYQASNSTSP LWYSIRRASA HIIVLSTYSP FVKYTPQWKW LREEFKNIDR
301: EKTPWLIVLM HVPIYNSNVA HFMEGESMRS VFEAWFIEHK VDVIFAGHVH AYERSYRISN IHFNISSGDP YPVPDETAPV YITVGDGGNK EGLAARFRDP
401: QPDYSAFRES SYGHSTLEIK NRTHAFYHWN RNDDGKKVKI DSFVLHNLYW GQNHHQRKSK QNRLRSLILN RASTAQL

Best Arabidopsis Sequence Match ( AT5G34850.1 )
(BLAST)

001: MNHLVIISVF LSSVLLLYRG ESGITSSFIR SEWPAVDIPL DHHVFKVPKG YNAPQQVHIT QGDYDGKAVI ISWVTPDEPG SSQVHYGAVQ GKYEFVAQGT
101: YHNYTFYKYK SGFIHHCLVS DLEHDTKYYY KIESGESSRE FWFVTPPHVH PDASYKFGII GDMGQTFNSL STLEHYMESG AQAVLFLGDL SYADRYQYND
201: VGVRWDSWGR FVERSTAYQP WLWSAGNHEV DYMPYMGEVT PFRNYLQRYT TPYLASKSSS PLWYAVRRAS AHIIVLSSYS PFVKYTPQWH WLSEELTRVD
301: REKTPWLIVL MHVPIYNSNE AHFMEGESMR AAFEEWFVQH KVDVIFAGHV HAYERSYRIS NVRYNVSSGD RYPVPDKSAP VYITVGDGGN QEGLAGRFTE
401: PQPDYSAFRE ASYGHSTLDI KNRTHAIYHW NRNDDGKKVA TDEFVLHNQY WGKNIRRRKL KKHYIRSVVG GWIAT

Arabidopsis Description

PAP26Purple acid phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UD94]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.