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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 4
  • golgi 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d046593_P001 Maize extracellular 96.64 96.64
Os06t0643900-01 Rice extracellular 88.87 88.87
HORVU7Hr1G115510.1 Barley extracellular 88.03 87.84
TraesCS7A01G517900.1 Wheat unclear 87.39 87.21
TraesCS7D01G507900.1 Wheat extracellular 87.18 87.0
TraesCS7B01G434100.1 Wheat unclear 86.97 86.79
GSMUA_Achr3P13260_001 Banana extracellular 75.63 76.92
TraesCS7B01G434000.1 Wheat extracellular, plastid 78.36 75.81
GSMUA_Achr1P26030_001 Banana extracellular 76.05 74.79
CDY12397 Canola extracellular 71.22 71.37
VIT_04s0008g06520.t01 Wine grape extracellular 72.06 70.87
Bra038946.1-P Field mustard extracellular 71.43 70.83
CDY47560 Canola extracellular 71.43 70.83
AT5G34850.1 Thale cress extracellular 70.17 70.32
Solyc07g007670.2.1 Tomato extracellular 68.91 68.76
Solyc12g009800.1.1 Tomato extracellular 68.49 68.34
PGSC0003DMT400020276 Potato extracellular 68.07 67.92
KRH20185 Soybean nucleus 66.39 66.53
KRH03620 Soybean endoplasmic reticulum 71.43 66.41
EES03706 Sorghum extracellular, plasma membrane 56.51 56.51
EES18780 Sorghum extracellular 53.15 53.6
KXG23582 Sorghum extracellular, golgi 53.78 53.0
KXG24135 Sorghum extracellular, golgi 52.94 51.64
KXG28303 Sorghum cytosol 7.35 38.89
OQU91473 Sorghum plastid 38.45 37.58
KXG26223 Sorghum peroxisome 36.55 35.29
EES15679 Sorghum mitochondrion 36.13 35.03
EES16643 Sorghum extracellular 31.09 34.5
EER93103 Sorghum extracellular 33.4 29.39
OQU80197 Sorghum mitochondrion 32.98 24.61
EES10559 Sorghum extracellular, plasma membrane 25.84 20.16
EES01609 Sorghum extracellular, plasma membrane 24.58 18.2
KXG23786 Sorghum extracellular 23.11 17.97
EES16213 Sorghum extracellular 23.11 17.77
EER95277 Sorghum extracellular 22.69 17.48
OQU80814 Sorghum mitochondrion 23.32 17.13
KXG33559 Sorghum mitochondrion 24.79 16.95
EER97846 Sorghum plasma membrane 23.11 16.85
KXG36229 Sorghum plastid 23.53 16.77
EES07096 Sorghum endoplasmic reticulum, extracellular, plasma membrane 22.69 16.62
KXG25538 Sorghum plastid 23.11 16.37
Protein Annotations
Gene3D:2.60.40.380Gene3D:3.60.21.10MapMan:35.1UniProt:A0A194YKI3InterPro:Calcineurin-like_PHP_ApaHInterPro:FN3_dom
GO:GO:0003674GO:GO:0003824GO:GO:0003993GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0005618GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005773GO:GO:0005829
GO:GO:0008150GO:GO:0008152GO:GO:0009505GO:GO:0009987GO:GO:0016311GO:GO:0016787
GO:GO:0030312GO:GO:0046872GO:GO:0055062InterPro:IPR003961InterPro:IPR008963InterPro:IPR029052
ProteinID:KXG20467.1EnsemblPlants:KXG20468ProteinID:KXG20468ProteinID:KXG20468.1InterPro:Metallo-depent_PP-likePFAM:PF00149
PFAM:PF14008PFAM:PF16656PFscan:PS50853PANTHER:PTHR22953PANTHER:PTHR22953:SF13InterPro:Purple_acid_PPase_C_dom
InterPro:Purple_acid_Pase-like_NInterPro:Purple_acid_Pase_NEnsemblPlantsGene:SORBI_3010G205200SUPFAM:SSF49363SUPFAM:SSF56300SignalP:SignalP-noTM
UniParc:UPI0001C804C6SEG:seg::::
Description
hypothetical protein
Coordinates
chr10:-:54803495..54809477
Molecular Weight (calculated)
55218.3 Da
IEP (calculated)
7.201
GRAVY (calculated)
-0.619
Length
476 amino acids
Sequence
(BLAST)
001: MRGWGLLVLS LHVLSCLVSG VASGRTSSYV RTEFPSTDIP LDSEWFAIPK GYNAPQQVHI TQGDYDGKAV IVSWVTPEEP GPSEVFYGKE KQYDQKSEGT
101: TTNYTFYDYK SGYIHHCLVD GLEYNTKYYY KIGSGDSARE FWFETPPAID PDASYTFGII GDLGQTFNSL STLQHYEKTG GQTVLFVGDL SYADRYEHND
201: GIRWDSWGRF VERSTAYQPW IWNTGNHEIE YRPDLGETST FKPYLHRYMT PYLASKSSSP MWYAVRRASA HIIVLSSYSP FVKYTPQWWW LKNEFKRVDR
301: EKTPWLIVLM HSPMYNSNEA HYMEGESMRA AFEKWFVKYK VDLVFAGHVH AYERSYRISN VNYNITSGNR YPVPNKSAPV YITVGDGGNQ EGLASRFYDP
401: QPDYSAFREA SYGHSLLQLK NRTHAVYQWN RNHDGNPVPA DTVVFHNQYW TSSTRRRRLK KNHFHLENLE DLISLF
Best Arabidopsis Sequence Match ( AT5G34850.1 )
(BLAST)
001: MNHLVIISVF LSSVLLLYRG ESGITSSFIR SEWPAVDIPL DHHVFKVPKG YNAPQQVHIT QGDYDGKAVI ISWVTPDEPG SSQVHYGAVQ GKYEFVAQGT
101: YHNYTFYKYK SGFIHHCLVS DLEHDTKYYY KIESGESSRE FWFVTPPHVH PDASYKFGII GDMGQTFNSL STLEHYMESG AQAVLFLGDL SYADRYQYND
201: VGVRWDSWGR FVERSTAYQP WLWSAGNHEV DYMPYMGEVT PFRNYLQRYT TPYLASKSSS PLWYAVRRAS AHIIVLSSYS PFVKYTPQWH WLSEELTRVD
301: REKTPWLIVL MHVPIYNSNE AHFMEGESMR AAFEEWFVQH KVDVIFAGHV HAYERSYRIS NVRYNVSSGD RYPVPDKSAP VYITVGDGGN QEGLAGRFTE
401: PQPDYSAFRE ASYGHSTLDI KNRTHAIYHW NRNDDGKKVA TDEFVLHNQY WGKNIRRRKL KKHYIRSVVG GWIAT
Arabidopsis Description
PAP26Purple acid phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UD94]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.