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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d043291_P001 Maize extracellular, plasma membrane 96.64 96.84
Os01t0776600-01 Rice extracellular 85.92 87.96
TraesCS3A01G320100.2 Wheat extracellular, plasma membrane, vacuole 85.92 87.77
TraesCS3D01G312000.1 Wheat extracellular, plasma membrane, vacuole 85.5 87.34
HORVU3Hr1G076060.1 Barley extracellular, plasma membrane, vacuole 85.29 87.12
TraesCS3B01G345800.1 Wheat extracellular, plasma membrane, vacuole 85.08 86.91
GSMUA_Achr7P01640_001 Banana extracellular, golgi, vacuole 75.21 78.0
GSMUA_Achr4P22380_001 Banana extracellular 76.05 77.68
CDX89720 Canola cytosol 23.53 75.68
CDY02259 Canola cytosol 67.65 75.59
Bra013072.1-P Field mustard cytosol 67.44 75.35
CDY20584 Canola cytosol 21.64 74.1
Solyc01g110050.1.1 Tomato cytosol 67.23 74.07
VIT_03s0038g00230.t01 Wine grape extracellular 72.69 73.31
Bra037302.1-P Field mustard extracellular 72.06 73.29
Solyc01g110060.2.1 Tomato nucleus 71.43 73.12
CDY47461 Canola extracellular 71.85 73.08
KRH23858 Soybean extracellular 71.22 73.06
CDY26770 Canola extracellular, vacuole 71.64 73.02
PGSC0003DMT400079528 Potato vacuole 72.06 72.98
PGSC0003DMT400079523 Potato extracellular 71.22 72.9
KRH39937 Soybean extracellular, vacuole 71.01 72.84
VIT_03s0038g00250.t01 Wine grape extracellular, plasma membrane 72.06 72.67
CDY02257 Canola extracellular, vacuole 69.96 71.46
CDX89726 Canola extracellular, vacuole 69.96 71.46
Bra013069.1-P Field mustard extracellular, vacuole 69.75 71.24
CDX89713 Canola extracellular 70.17 71.06
AT2G16430.2 Thale cress extracellular, golgi, vacuole 69.75 70.94
VIT_08s0056g00380.t01 Wine grape cytosol, extracellular 12.61 70.59
VIT_03s0038g00220.t01 Wine grape extracellular, vacuole 68.91 69.64
KRH27195 Soybean extracellular, plasma membrane, vacuole 67.86 68.87
KRH22146 Soybean extracellular, golgi 67.44 68.15
CDX89717 Canola extracellular 64.92 67.17
GSMUA_Achr4P17700_001 Banana mitochondrion 73.53 66.41
CDX89722 Canola extracellular 28.78 64.93
CDX67523 Canola mitochondrion 44.12 64.62
KXG23582 Sorghum extracellular, golgi 63.24 62.32
EES18780 Sorghum extracellular 61.76 62.29
CDY71248 Canola mitochondrion 36.13 60.78
Bra026433.1-P Field mustard nucleus 34.45 60.29
KXG24135 Sorghum extracellular, golgi 60.92 59.43
KXG20468 Sorghum extracellular 56.51 56.51
KXG28303 Sorghum cytosol 7.98 42.22
KXG26223 Sorghum peroxisome 36.34 35.09
OQU91473 Sorghum plastid 35.71 34.91
EES15679 Sorghum mitochondrion 35.08 34.01
EES16643 Sorghum extracellular 30.25 33.57
EER93103 Sorghum extracellular 35.71 31.42
OQU80197 Sorghum mitochondrion 33.19 24.76
EES10559 Sorghum extracellular, plasma membrane 24.58 19.18
KXG23786 Sorghum extracellular 24.16 18.79
EER95277 Sorghum extracellular 23.95 18.45
EES01609 Sorghum extracellular, plasma membrane 24.16 17.88
EES16213 Sorghum extracellular 23.11 17.77
EER97846 Sorghum plasma membrane 23.32 17.0
OQU80814 Sorghum mitochondrion 22.9 16.82
EES07096 Sorghum endoplasmic reticulum, extracellular, plasma membrane 22.9 16.77
KXG36229 Sorghum plastid 23.32 16.62
KXG33559 Sorghum mitochondrion 23.32 15.95
KXG25538 Sorghum plastid 22.48 15.92
Protein Annotations
Gene3D:2.60.40.380Gene3D:3.60.21.10MapMan:35.1EntrezGene:8079286UniProt:C5XLM4InterPro:Calcineurin-like_PHP_ApaH
EnsemblPlants:EES03706ProteinID:EES03706ProteinID:EES03706.1GO:GO:0003674GO:GO:0003824GO:GO:0003993
GO:GO:0005488GO:GO:0005575GO:GO:0005618GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005829GO:GO:0006950GO:GO:0007154GO:GO:0008150GO:GO:0008152GO:GO:0009505
GO:GO:0009506GO:GO:0009605GO:GO:0009987GO:GO:0009991GO:GO:0016036GO:GO:0016311
GO:GO:0016787GO:GO:0030312GO:GO:0046872InterPro:IPR008963InterPro:IPR029052InterPro:Metallo-depent_PP-like
PFAM:PF00149PFAM:PF14008PFAM:PF16656PANTHER:PTHR22953PANTHER:PTHR22953:SF22InterPro:Purple_acid_PPase_C_dom
InterPro:Purple_acid_Pase-like_NInterPro:Purple_acid_Pase_NEnsemblPlantsGene:SORBI_3003G314400SUPFAM:SSF49363SUPFAM:SSF56300unigene:Sbi.9710
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001A8568ARefSeq:XP_002458586.1SEG:seg:
Description
hypothetical protein
Coordinates
chr3:-:64249277..64253924
Molecular Weight (calculated)
54054.9 Da
IEP (calculated)
6.323
GRAVY (calculated)
-0.432
Length
476 amino acids
Sequence
(BLAST)
001: MGRHGVDQIG AVAAAFAWVV LLPLLLVGVV CPGAQAGQTS EYRRQLGSAI DMPLDADVFR PPPGHNAPEQ VHITQGNHDG TAMIISWVTT SEPGSSTVIY
101: GTSEDNLNYT ANGKHTQYTF YNYTSGYIHH CTIKKLEFDT KYYYAVGIGQ TVRKFWFMTP PESGPDVPYT FGLIGDLGQS FDSNVTLTHY ESNAKAQAVL
201: FVGDLSYADN YPYHDNVRWD TWARFVERNV AYQPWIWTAG NHEIDFAPEL GETKPFKPFS QRYPTPYKAS GSTAPYWYSI KRASAYIIVL ASYSAYGKYT
301: PQYKWLEAEF PKVNRSETPW LIVLMHAPWY NSYNYHYMEG ETMRVMYEPW FVKYKVDVVF AGHVHAYERT HRISNVAYNV VNGLCTPISD QSAPVYITIG
401: DGGNQEGLAT NMSQPQPRYS AFREASFGHA ILDIKNRTHA YYTWHRNQDG SSVAADSMWF TNRYWEPTDD SADDFQ
Best Arabidopsis Sequence Match ( AT2G16430.2 )
(BLAST)
001: MGRVRKSDFG SIVLVLCCVL NSLLCNGGIT SRYVRKLEAT VDMPLDSDVF RVPCGYNAPQ QVHITQGDVE GKAVIVSWVT QEAKGSNKVI YWKENSTKKH
101: KAHGKTNTYK FYNYTSGFIH HCPIRNLEYD TKYYYVLGVG QTERKFWFFT PPEIGPDVPY TFGLIGDLGQ SYDSNITLTH YENNPTKGQA VLFVGDISYA
201: DTYPDHDNRR WDSWGRFAER STAYQPWIWT TGNHELDFAP EIGENRPFKP FTHRYRTPYR SSGSTEPFWY SIKRGPAYII VLASYSAYGK YTPQYQWLEE
301: EFPKVNRTET PWLIVLMHSP WYNSYDYHYM EGETMRVMYE AWFVKYKVDV VFAGHVHAYE RSERVSNIAY NVVNGICTPV KDQSAPVYIT IGDGGNIEGL
401: ATKMTEPQPK YSAFREASFG HAIFSIKNRT HAHYGWHRNH DGYAVEGDRM WFYNRFWHPV DDSPSCNS
Arabidopsis Description
PAP10Purple acid phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VZQ7]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.