CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
OQU92006

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G13750.1	OQU92006	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES16213	Sorghum	extracellular	83.98	90.63
TraesCS5A01G082400.1	Wheat	plastid	79.94	87.54
HORVU5Hr1G020400.5	Barley	extracellular	79.94	87.4
Zm00001d006374_P001	Maize	extracellular	86.38	87.29
TraesCS5B01G083000.1	Wheat	endoplasmic reticulum, extracellular	79.34	86.74
TraesCS5B01G083700.1	Wheat	extracellular	79.64	83.91
KXG23786	Sorghum	extracellular	68.71	75.0
EER95277	Sorghum	extracellular	64.67	69.9
KRG99244	Soybean	extracellular	63.77	69.16
PGSC0003DMT400072925	Potato	extracellular	63.17	69.07
PGSC0003DMT400023440	Potato	extracellular	63.17	69.07
KRH45750	Soybean	vacuole	63.32	68.67
Solyc05g012260.2.1	Tomato	nucleus	62.28	68.65
CDY16105	Canola	extracellular	61.38	66.67
AT1G13750.1	Thale cress	extracellular, plasma membrane, vacuole	61.08	66.56
Bra026890.1-P	Field mustard	extracellular, golgi	61.38	66.02
CDY33806	Canola	extracellular, golgi, vacuole	61.38	66.02
KRH70903	Soybean	endoplasmic reticulum, extracellular, golgi, plastid	62.28	64.9
EES10559	Sorghum	extracellular, plasma membrane	57.93	63.44
VIT_01s0011g00470.t01	Wine grape	cytosol, extracellular, plasma membrane	63.77	63.39
CDX98126	Canola	extracellular, plasma membrane	58.53	63.17
CDY36408	Canola	extracellular, plasma membrane	50.15	62.97
Bra019705.1-P	Field mustard	extracellular, plasma membrane	58.38	62.9
OQU80814	Sorghum	mitochondrion	57.19	58.95
KXG25538	Sorghum	plastid	56.74	56.4
EES01609	Sorghum	extracellular, plasma membrane	30.39	31.57
KXG33559	Sorghum	mitochondrion	29.94	28.74
EES07096	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	26.65	27.38
EER97846	Sorghum	plasma membrane	25.0	25.57
KXG24135	Sorghum	extracellular, golgi	18.11	24.8
EES18780	Sorghum	extracellular	17.52	24.79
KXG23582	Sorghum	extracellular, golgi	17.52	24.22
KXG20468	Sorghum	extracellular	16.77	23.53
EES03706	Sorghum	extracellular, plasma membrane	16.62	23.32
EES16643	Sorghum	extracellular	14.07	21.91
OQU91473	Sorghum	plastid	15.42	21.15
EER93103	Sorghum	extracellular	16.92	20.89
EES15679	Sorghum	mitochondrion	15.27	20.77
KXG26223	Sorghum	peroxisome	14.97	20.28
KXG28303	Sorghum	cytosol	2.69	20.0
OQU80197	Sorghum	mitochondrion	18.26	19.12

Protein Annotations

Gene3D:3.60.21.10	MapMan:35.1	UniProt:A0A1B6QE87	InterPro:Calcineurin-like_PHP_ApaH	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0003993	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016311	GO:GO:0016787	GO:GO:0046872	InterPro:IPR008963	InterPro:IPR029052	EnsemblPlants:KXG36229
ProteinID:KXG36229	ProteinID:KXG36229.1	InterPro:Metallo-depent_PP-like	ProteinID:OQU89956.1	PFAM:PF00149	PFAM:PF14008
PFAM:PF16656	PANTHER:PTHR22953	PANTHER:PTHR22953:SF94	InterPro:Purple_acid_PPase_C_dom	InterPro:Purple_acid_Pase-like_N	InterPro:Purple_acid_Pase_N
EnsemblPlantsGene:SORBI_3002G303700	SUPFAM:SSF49363	SUPFAM:SSF56300	UniParc:UPI00081AE385	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:+:67951734..67955841

Molecular Weight (calculated)

74768.6 Da

IEP (calculated)

6.546

GRAVY (calculated)

-0.415

Length

668 amino acids

Sequence
(BLAST)

001: MATGHGSSLP PIQYTARHPG RRRRRRLVLL PNQVQEQDST TWEFVSSGQG SMRVRGLLLL TWLAVSAVAA HPAGTGRGGA GEQPLSRIAV ERVVLAVNDA
101: AHVKASPLVL GHKGENSEWV DVEFFHPEPS DDDWIGVFSP ANFSDAICES ENTGPPVLCT APIKYQFANF KNDGYNMTGK GYLKLQLINQ REDFSFALFS
201: GGLSKPKLIA VSNKVAFANP KAPVYPRLAQ GKSWNEMTVT WTSGYDITEA VPFVEWGEKG GRRLLAPAGT LTFDRNSMCG SPARTVGWRH PGYIHTSYLK
301: DLWPDAPYTY RLGHRLMNGT RIWSKSYSFK ASPYPGQDSL QRVIIFGDMG KAEADGSNEF NDFQPGSLNT TYQIIRDLEN IDMVVHIGDI CYANGYLSQW
401: DQFTAQIEPI ASTVPYMIGS GNHERDWPGT GSFYGNRDSG GECGVPAQTV FYTPAENRAK FWYATDYGMF RFCIANTEED WRPGTEQYKF IEQCLSSVDR
501: QKQPWLIFLA HRVLGYSSCT YYESEGTFEE PMGREALQEL WQKHKVDLAF YGHVHSYERT CPVYQSQCVV DGSDHYSGPF QATTHVVVGG AGASVLDSEF
601: TTSKIQWSHF TDFDHGFVKL TALNHSSLLF EYKKSRDGNV YDHFTISRDY RDILACSIDN CPRTTLAS

Best Arabidopsis Sequence Match ( AT1G13750.1 )
(BLAST)

001: MRESLVAILV TVISVLGAIH QVKSHEDQPL SGIAVHKITF GLNEKAYVKA SPTVLGSNGQ HSELVLVQYS SPKPSDDDWI GVFSPADFNA STCPGDNKMV
101: QPPRLCSAPV KFQYANFSNP RYTNTGTGSL KLQLINQRSD FSFALFSGGL LNPKLVAISN KVAFENPNAP VYPRLALGKE WDEMTVTWTS GYGLNLAEPV
201: VEWGVKGGER KLSPAGTLTF ARNSMCGAPA RTVGWRDPGY IHTAFLKELW PNSKYTYRVG HRLSNGALIW SKEYQFKSSP FPGQNSVQQV VIFGDMGKAE
301: VDGSSEYNDF QRASLNTTKQ LIKDLKKTDA VFHIGDICYA NGYLSQWDQF IAQIEPIAST VPYMIASGNH ERVWPNSGSF YEGLDSGGEC GVPAETMFYV
401: PAQNRAKVWY SSDYGMFRFC VADTEHDWRE GTEQYNFIEH CLASVDRQKQ PWLIFLAHRV LGYSSTYFYA EEGSFAEPMG RESLQKLWQK YKVDIAIYGH
501: AHNYERTCPV YQSVCTSHEK SNYKAPLNGT IHIVAGGGGA GLAEFSDLQP NWSLFRDYDY GFLKLTAIDH SNLLFEYKKS SDGRVHDSFT ISKDYRDILA
601: CAVDSCPATT LAS

Arabidopsis Description

PAP1Probable inactive purple acid phosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMX4]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.