Factsheet for TraesCS4B01G247300.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G099400.1
TraesCS3B01G115800.1
TraesCS3D01G099700.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G13750.1	TraesCS3A01G099400.1	AT2G01950.1	19000166
AT1G13750.1	TraesCS3B01G115800.1	AT2G01950.1	19000166
AT1G13750.1	TraesCS3D01G099700.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G246600.1	Wheat	golgi	97.24	98.52
TraesCS4A01G057700.2	Wheat	extracellular	99.03	95.02
HORVU4Hr1G067950.8	Barley	extracellular, plasma membrane	96.92	90.33
Os03t0214000-01	Rice	extracellular, plasma membrane	84.12	84.39
Zm00001d035906_P001	Maize	cytosol	16.69	83.06
EER95277	Sorghum	extracellular	82.98	82.85
Zm00001d048090_P002	Maize	plasma membrane	83.31	81.2
GSMUA_Achr3P15950_001	Banana	vacuole	71.31	71.78
TraesCS5B01G083000.1	Wheat	endoplasmic reticulum, extracellular	69.69	70.38
TraesCS5B01G082700.1	Wheat	endoplasmic reticulum, extracellular, golgi	69.21	68.98
TraesCS5B01G083600.1	Wheat	endoplasmic reticulum, extracellular, golgi	68.88	68.66
KRH45750	Soybean	vacuole	68.4	68.51
TraesCS5B01G083700.1	Wheat	extracellular	70.34	68.45
KRG99244	Soybean	extracellular	68.07	68.18
PGSC0003DMT400023440	Potato	extracellular	65.32	65.96
PGSC0003DMT400072925	Potato	extracellular	65.15	65.79
Solyc05g012260.2.1	Tomato	nucleus	64.34	65.51
CDY16105	Canola	extracellular	65.15	65.37
Bra026890.1-P	Field mustard	extracellular, golgi	65.48	65.06
CDY33806	Canola	extracellular, golgi, vacuole	65.48	65.06
AT1G13750.1	Thale cress	extracellular, plasma membrane, vacuole	64.18	64.6
KRH70903	Soybean	endoplasmic reticulum, extracellular, golgi, plastid	65.8	63.34
VIT_01s0011g00470.t01	Wine grape	cytosol, extracellular, plasma membrane	67.75	62.2
CDY36408	Canola	extracellular, plasma membrane	53.0	61.47
CDX98126	Canola	extracellular, plasma membrane	61.59	61.39
TraesCS1B01G422100.1	Wheat	vacuole	61.26	61.26
Bra019705.1-P	Field mustard	extracellular, plasma membrane	61.43	61.13
TraesCS7B01G158000.1	Wheat	cytosol, extracellular, mitochondrion	57.37	60.72
TraesCS4B01G348600.1	Wheat	extracellular, plasma membrane	60.29	60.29
TraesCS5B01G285400.1	Wheat	extracellular, golgi	55.75	58.4
TraesCS5B01G285300.1	Wheat	cytosol	35.33	53.83
TraesCS5B01G285200.1	Wheat	extracellular	53.48	52.72
TraesCS3B01G359800.1	Wheat	extracellular, plasma membrane, vacuole	33.23	32.44
TraesCS5B01G127700.1	Wheat	extracellular	17.18	26.84
TraesCS4B01G337500.1	Wheat	cytosol	16.69	26.48
TraesCS5B01G446500.1	Wheat	extracellular	27.71	26.31
TraesCS6B01G389100.1	Wheat	extracellular	19.45	25.92
TraesCS2B01G573000.1	Wheat	extracellular, nucleus, plasma membrane	27.71	25.41
TraesCS3B01G345800.1	Wheat	extracellular, plasma membrane, vacuole	18.8	24.89
TraesCS2B01G280200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	25.93	24.58
TraesCS2B01G310500.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	17.67	24.55
TraesCS5B01G471500.1	Wheat	extracellular	17.99	24.08
TraesCS6B01G142700.1	Wheat	extracellular, plasma membrane	18.64	24.01
TraesCS7B01G434100.1	Wheat	unclear	17.67	22.85
TraesCS7B01G434000.1	Wheat	extracellular, plastid	18.15	22.76
TraesCS5B01G127800.1	Wheat	mitochondrion	18.31	22.47
TraesCS3B01G202200.2	Wheat	extracellular	18.31	20.93
TraesCS2B01G534400.2	Wheat	plastid	17.83	20.41
TraesCS5B01G180300.1	Wheat	extracellular, golgi, mitochondrion, plastid, vacuole	18.96	19.37
TraesCS5B01G329300.2	Wheat	endoplasmic reticulum, extracellular, peroxisome	17.34	18.38

Protein Annotations

Gene3D:3.60.21.10	MapMan:35.1	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674	GO:GO:0003824	GO:GO:0003993
GO:GO:0005488	GO:GO:0016787	GO:GO:0046872	InterPro:IPR008963	InterPro:IPR029052	InterPro:Metallo-depent_PP-like
PFAM:PF00149	PFAM:PF14008	PANTHER:PTHR22953	PANTHER:PTHR22953:SF54	InterPro:Purple_acid_PPase_C_dom	InterPro:Purple_acid_Pase-like_N
SUPFAM:SSF49363	SUPFAM:SSF56300	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4B01G247300	EnsemblPlants:TraesCS4B01G247300.1
TIGR:cd00839	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4B:-:512162163..512166271

Molecular Weight (calculated)

68399.5 Da

IEP (calculated)

6.236

GRAVY (calculated)

-0.277

Length

617 amino acids

Sequence
(BLAST)

001: MKSPPGTTMV AALVHLLVAF SAAVLAAAGG EQPLSKIGIH RATLAIHPGA SVDVSPLLLG LQGQDQEWVT IGFNNPKPSK DDWIGVFSPA NFSDSICPSE
101: NQWVEAPLLC TAPIKFQYAN YTTADYAKTG KGSLRLQIIN QRSDISFALF SGGLSNPKLI ARSNSITFAN PKAPVYPRLA QGKSWDEMTV TWTSGYSTKE
201: ATPFVEWGIQ GQIQILSPAG TLTFSRDTMC GPPARTVGWR DPGFIHTSFL KDLWPNLKYT YRIGHWLFNG QIVWGHQNSF KAPPYPGEDS LQRVVIFGDL
301: GKAEIDGSNE YNDFERGSIN TTYQLVKDLK NIDMVMHIGD ICYASGYLSQ WDQFTAQVEP IASTVPYMVA SGNHERDWPG SGSFYGTLDS GGECGVPAQN
401: MFYVPAENRE QFWYSTDYGM FRFCIANTEL DWRPGTEQYK FIEHCLSSVD RQKQPWLIFL AHRVLGYSSA TFYGAEGTTE EPMGRESLQL LWQKYRVDIA
501: MYGHVHGYER TCPVYENVCV AKGSDRYSGA FTATTHVVVG GGGASLAEYT AERARWSHAQ DLDYGFAKLT AFNHTTLLME YKRSRDGSVR DSFTVSRDYR
601: DVLACGVDNC ASTTMAS

Best Arabidopsis Sequence Match ( AT1G13750.1 )
(BLAST)

001: MRESLVAILV TVISVLGAIH QVKSHEDQPL SGIAVHKITF GLNEKAYVKA SPTVLGSNGQ HSELVLVQYS SPKPSDDDWI GVFSPADFNA STCPGDNKMV
101: QPPRLCSAPV KFQYANFSNP RYTNTGTGSL KLQLINQRSD FSFALFSGGL LNPKLVAISN KVAFENPNAP VYPRLALGKE WDEMTVTWTS GYGLNLAEPV
201: VEWGVKGGER KLSPAGTLTF ARNSMCGAPA RTVGWRDPGY IHTAFLKELW PNSKYTYRVG HRLSNGALIW SKEYQFKSSP FPGQNSVQQV VIFGDMGKAE
301: VDGSSEYNDF QRASLNTTKQ LIKDLKKTDA VFHIGDICYA NGYLSQWDQF IAQIEPIAST VPYMIASGNH ERVWPNSGSF YEGLDSGGEC GVPAETMFYV
401: PAQNRAKVWY SSDYGMFRFC VADTEHDWRE GTEQYNFIEH CLASVDRQKQ PWLIFLAHRV LGYSSTYFYA EEGSFAEPMG RESLQKLWQK YKVDIAIYGH
501: AHNYERTCPV YQSVCTSHEK SNYKAPLNGT IHIVAGGGGA GLAEFSDLQP NWSLFRDYDY GFLKLTAIDH SNLLFEYKKS SDGRVHDSFT ISKDYRDILA
601: CAVDSCPATT LAS

Arabidopsis Description

PAP1Probable inactive purple acid phosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMX4]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.