Factsheet for TraesCS6D01G126500.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	unclear
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G166000.1	Wheat	extracellular, plasma membrane, vacuole	96.52	98.1
TraesCS6D01G126600.1	Wheat	extracellular, plasma membrane, vacuole	82.89	83.78
TraesCS7D01G487400.1	Wheat	extracellular, plasma membrane	60.96	63.51
TraesCS7D01G487100.1	Wheat	extracellular, vacuole	59.89	60.38
TraesCS7D01G487000.1	Wheat	vacuole	59.36	59.84
TraesCS7D01G487300.1	Wheat	extracellular, golgi, vacuole	59.09	59.57
TraesCS7D01G487200.1	Wheat	vacuole	58.29	58.45
TraesCS3D01G235900.2	Wheat	extracellular, golgi, vacuole	53.48	55.1
TraesCS7D01G487800.1	Wheat	extracellular, vacuole	58.56	54.61
Os01t0650900-00	Rice	vacuole	51.07	48.72
Solyc02g077120.2.1	Tomato	cytosol	23.8	41.78
TraesCS3D01G050700.1	Wheat	extracellular	41.98	40.36
GSMUA_Achr5P21270_001	Banana	extracellular, plasma membrane, vacuole	39.84	39.52
GSMUA_Achr8P10340_001	Banana	extracellular, vacuole	39.84	39.11
Solyc03g006250.2.1	Tomato	extracellular	39.57	38.95
TraesCS2D01G150000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	35.29	38.82
PGSC0003DMT400011185	Potato	endoplasmic reticulum, extracellular, vacuole	39.57	38.64
GSMUA_Achr6P35710_001	Banana	mitochondrion	40.91	38.44
TraesCS3D01G145800.1	Wheat	extracellular	37.97	38.38
TraesCS7D01G109100.1	Wheat	plasma membrane	38.77	38.26
TraesCS2D01G479800.1	Wheat	extracellular, vacuole	29.95	37.97
TraesCS2D01G137500.2	Wheat	mitochondrion, vacuole	37.43	37.74
AT1G28600.1	Thale cress	extracellular, plasma membrane	39.57	37.66
TraesCS2D01G137700.1	Wheat	extracellular, vacuole	37.43	37.63
TraesCS2D01G150200.1	Wheat	cytosol	20.32	37.62
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plasma membrane, vacuole	38.24	37.43
KRH21306	Soybean	cytosol	21.39	37.38
GSMUA_Achr8P10360_001	Banana	extracellular, vacuole	36.63	37.33
AT2G27360.1	Thale cress	extracellular, vacuole	39.3	37.31
Solyc10g008710.2.1	Tomato	extracellular	37.7	37.3
TraesCS3D01G146200.1	Wheat	golgi	36.9	37.1
TraesCS1D01G321300.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	36.1	37.09
GSMUA_Achr8P30010_001	Banana	extracellular, vacuole	35.29	37.08
CDX94632	Canola	extracellular, plasma membrane, vacuole	37.7	36.91
TraesCS3D01G056800.1	Wheat	golgi	37.17	36.87
TraesCS2D01G149900.1	Wheat	golgi, vacuole	38.24	36.86
AT1G31550.2	Thale cress	extracellular, plasma membrane	38.77	36.8
CDY15658	Canola	extracellular, golgi	37.97	36.79
PGSC0003DMT400026549	Potato	extracellular, vacuole	39.3	36.75
AT1G28580.1	Thale cress	extracellular, vacuole	38.24	36.67
TraesCS3D01G236000.2	Wheat	mitochondrion	42.78	36.61
AT1G28610.2	Thale cress	extracellular	37.43	36.55
TraesCS3D01G235600.1	Wheat	extracellular	35.83	36.41
CDY15655	Canola	extracellular	38.24	36.39
TraesCS7D01G108900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	35.03	36.29
Bra032917.1-P	Field mustard	extracellular	37.7	36.25
CDY34089	Canola	extracellular	37.7	36.25
Bra030108.1-P	Field mustard	extracellular, vacuole	38.24	36.2
Bra030106.1-P	Field mustard	extracellular, plasma membrane, vacuole	32.62	36.2
CDX94634	Canola	plastid	38.5	36.18
TraesCS2D01G137600.1	Wheat	extracellular, plasma membrane, vacuole	35.56	36.14
TraesCS5D01G217100.1	Wheat	extracellular, plasma membrane, vacuole	36.1	36.1
TraesCS7D01G330100.1	Wheat	extracellular, vacuole	35.56	36.04
AT1G28570.1	Thale cress	extracellular, plasma membrane	37.43	35.99
TraesCS7D01G421100.1	Wheat	endoplasmic reticulum, extracellular	35.03	35.99
KRH21302	Soybean	extracellular	36.36	35.98
KRH21309	Soybean	cytosol, extracellular, golgi, mitochondrion	36.9	35.94
TraesCS3D01G134200.1	Wheat	extracellular, plasma membrane	35.56	35.75
CDY63998	Canola	extracellular, vacuole	37.17	35.73
AT1G28590.1	Thale cress	extracellular	38.5	35.73
CDY30822	Canola	extracellular, plasma membrane	38.24	35.66
Bra010858.1-P	Field mustard	extracellular	37.17	35.64
CDX90163	Canola	extracellular, plasma membrane, vacuole	37.17	35.64
TraesCS1D01G127400.1	Wheat	cytosol, golgi, plastid	29.95	35.56
TraesCS3D01G232800.1	Wheat	plastid	38.5	35.56
TraesCS7D01G421200.1	Wheat	endoplasmic reticulum, extracellular	35.83	35.54
Bra030111.1-P	Field mustard	vacuole	36.9	35.48
CDY64716	Canola	extracellular, plasma membrane	36.9	35.48
TraesCS3D01G236100.1	Wheat	plastid	40.11	35.46
Bra010857.1-P	Field mustard	extracellular, plasma membrane, vacuole	36.9	35.38
CDY43309	Canola	extracellular, plasma membrane, vacuole	36.9	35.38
GSMUA_Achr1P24780_001	Banana	endoplasmic reticulum, vacuole	38.77	35.37
TraesCS3D01G254400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	36.1	35.34
TraesCS5D01G221700.1	Wheat	extracellular	34.76	35.33
CDX90162	Canola	extracellular	36.63	35.13
GSMUA_Achr8P30020_001	Banana	endoplasmic reticulum, extracellular, plasma membrane, plastid	38.77	35.11
CDX94633	Canola	extracellular	37.17	35.1
Solyc10g008720.2.1	Tomato	extracellular	36.36	35.05
CDY15657	Canola	extracellular, plasma membrane	37.17	35.01
Bra030107.1-P	Field mustard	extracellular, plasma membrane	37.43	35.0
TraesCS3D01G146300.1	Wheat	plasma membrane	34.22	34.97
GSMUA_Achr8P10350_001	Banana	endoplasmic reticulum, nucleus, peroxisome	36.9	34.85
AT1G28650.1	Thale cress	extracellular, golgi, vacuole	35.83	34.81
KRH10995	Soybean	mitochondrion	36.36	34.78
TraesCS7D01G421900.1	Wheat	endoplasmic reticulum, extracellular, vacuole	35.03	34.75
AT1G28670.1	Thale cress	extracellular, plasma membrane, vacuole	35.56	34.64
KRH10992	Soybean	extracellular	37.17	34.58
CDY43308	Canola	extracellular	36.63	34.34
TraesCS7D01G329700.1	Wheat	extracellular, golgi, mitochondrion	34.22	34.32
TraesCS1D01G389900.1	Wheat	endoplasmic reticulum, extracellular, golgi	34.49	34.31
Bra032915.1-P	Field mustard	mitochondrion, plasma membrane	36.36	34.26
CDY30819	Canola	mitochondrion, plasma membrane	36.36	34.26
CDY34093	Canola	mitochondrion, plasma membrane	36.36	34.26
CDY63997	Canola	plastid	31.55	33.91
KRH21299	Soybean	mitochondrion	36.1	33.75
TraesCS7D01G111800.1	Wheat	extracellular, golgi	33.16	33.7
AT1G28660.1	Thale cress	extracellular, plasma membrane, vacuole	34.49	33.68
TraesCS3D01G541000.1	Wheat	extracellular	33.96	33.6
AT1G28640.1	Thale cress	plasma membrane	34.76	33.42
TraesCS5D01G368100.1	Wheat	plasma membrane	28.61	33.33
TraesCS3D01G146000.1	Wheat	cytosol, peroxisome, plasma membrane	35.56	33.25
TraesCS1D01G390000.1	Wheat	plastid	23.26	33.21
TraesCS7D01G109200.1	Wheat	plasma membrane	34.49	32.91
TraesCS5D01G431000.1	Wheat	endoplasmic reticulum, extracellular, vacuole	33.42	32.72
TraesCS6D01G183800.1	Wheat	extracellular, plasma membrane	33.42	32.72
GSMUA_Achr11P...	Banana	extracellular	36.1	32.14
TraesCS3D01G156000.1	Wheat	extracellular, golgi, vacuole	32.35	31.51
TraesCS6D01G194200.1	Wheat	vacuole	33.42	31.33
TraesCS5D01G294700.1	Wheat	extracellular, vacuole	26.47	31.23
TraesCS1D01G250200.1	Wheat	extracellular, vacuole	33.96	31.13
TraesCS3D01G258000.3	Wheat	extracellular	33.69	30.96
TraesCS3D01G145900.1	Wheat	extracellular	29.95	30.77
TraesCS2D01G025800.1	Wheat	extracellular, golgi, plastid	31.82	30.59
TraesCS6D01G008900.2	Wheat	plastid	33.16	28.97
TraesCS1D01G005500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	30.75	28.75
TraesCS2D01G150100.1	Wheat	mitochondrion, plastid	31.55	26.7

Protein Annotations

Gene3D:3.40.50.1110	MapMan:35.1	InterPro:GDSL	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0016298	GO:GO:0016787	GO:GO:0016788	InterPro:IPR036514
InterPro:Lipase_GDSL_AS	PFAM:PF00657	ScanProsite:PS01098	PANTHER:PTHR22835	PANTHER:PTHR22835:SF309	InterPro:SGNH_hydro_sf
InterPro:SGNH_plant_lipase_like	SUPFAM:SSF52266	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6D01G126500	EnsemblPlants:TraesCS6D01G126500.1	TIGR:cd01837
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6D:+:90193863..90195161

Molecular Weight (calculated)

40719.7 Da

IEP (calculated)

6.841

GRAVY (calculated)

-0.033

Length

374 amino acids

Sequence
(BLAST)

001: MGSRRCFSAV SGVSAVVLAI SVVALLNADV VLCGCSYKRI FAFGDSLIDT GNLLYSIGNS ASPIKELPYG MTFFKHPNGR VTDGRVVVDF YAEALGLPLL
101: PPSIPEEASG QFPNGANFAV AGAIALPPEY YKTNYNFTMN APSNLDRQLA SFKKVLARIA PGDGATRALL SESLVLMGEI GGNDYNFWFI DPRNPRETPE
201: KYLPDVVTCI GATVQEVINL GARTIVVPGN FPIGCLPAYL SAHESKVTDD YDELHCLKWY NEFSQKHNLA LRQEVVRLRS RNPGVKIVYA DYYSAAMQFV
301: QKPQAYGIAD PLVACCGGNG PYHSGACNNK TKLWGSPDRF ANWDGLHMTE KAYKIVADGV LDGPFADTPL RHLC

Best Arabidopsis Sequence Match ( AT1G28570.1 )
(BLAST)

001: MATLFMKLVS FFLILSTFCL TTVNSEPQCH NFKSIISFGD SIADTGNLLA LSDPTNLPKV AFLPYGETFF HHPTGRFSNG RLIIDFIAEF LGFPLVPPFY
101: GSQNANFEKG VNFAVGGATA LERSFLEERG IHFPYTNVSL AVQLSSFKES LPNLCVSPSD CRDMIENSLI LMGEIGGNDY NYAFFVGKNI EEIKELVPLV
201: IETISSAITE LIGMGGKTFL VPGEFPLGCS VAYLSLYQTS NIEEYDPLTG CLKWLNKFSE YHDEQLQAEL NRLQKLYPHV NIIYADYYNT LLRLAQEPAK
301: FGFISRPLPA CCALGGPFNF TLGRKRGTQV PECCDDPSKY VSWDGVHMTE AAYRLMAEGI LKGPYAIPPF DWSCLSSEIK NTQNSLMNN

Arabidopsis Description

GDSL esterase/lipase At1g28570 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXJ1]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.