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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 1
  • extracellular 7
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 5
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular, plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:vacuole
 extracellular: 22364583
msms PMID: 22364583 doi
P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez
Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400011185 Potato endoplasmic reticulum, extracellular, vacuole 94.74 93.99
Solyc02g077120.2.1 Tomato cytosol 31.84 56.81
KRH21306 Soybean cytosol 31.32 55.61
KRH21309 Soybean cytosol, extracellular, golgi, mitochondrion 54.47 53.91
KRH21302 Soybean extracellular 53.16 53.44
KRH10995 Soybean mitochondrion 53.42 51.92
AT1G28610.2 Thale cress extracellular 52.11 51.7
KRH10992 Soybean extracellular 54.47 51.49
AT1G28590.1 Thale cress extracellular 54.47 51.36
AT1G28600.1 Thale cress extracellular, plasma membrane 52.89 51.15
CDY15655 Canola extracellular 52.89 51.15
CDX94632 Canola extracellular, plasma membrane, vacuole 51.32 51.05
AT1G28570.1 Thale cress extracellular, plasma membrane 52.11 50.9
Bra030108.1-P Field mustard extracellular, vacuole 52.89 50.89
Solyc10g008710.2.1 Tomato extracellular 50.53 50.79
CDY15658 Canola extracellular, golgi 51.58 50.78
CDX90163 Canola extracellular, plasma membrane, vacuole 51.84 50.51
CDY30822 Canola extracellular, plasma membrane 53.16 50.37
CDY43309 Canola extracellular, plasma membrane, vacuole 51.58 50.26
CDX94634 Canola plastid 52.63 50.25
Bra032917.1-P Field mustard extracellular 51.32 50.13
CDY34089 Canola extracellular 51.32 50.13
AT1G28580.1 Thale cress extracellular, vacuole 51.32 50.0
AT1G31550.2 Thale cress extracellular, plasma membrane 51.84 50.0
Bra010857.1-P Field mustard extracellular, plasma membrane, vacuole 51.32 50.0
Solyc10g008720.2.1 Tomato extracellular 51.05 50.0
AT1G28650.1 Thale cress extracellular, golgi, vacuole 50.53 49.87
GSMUA_Achr8P10340_001 Banana extracellular, vacuole 49.47 49.34
GSMUA_Achr5P21270_001 Banana extracellular, plasma membrane, vacuole 48.95 49.34
Bra030106.1-P Field mustard extracellular, plasma membrane, vacuole 43.68 49.26
GSMUA_Achr6P35710_001 Banana mitochondrion 51.58 49.25
AT1G28670.1 Thale cress extracellular, plasma membrane, vacuole 49.74 49.22
Solyc03g006240.2.1 Tomato nucleus 47.37 48.91
AT2G27360.1 Thale cress extracellular, vacuole 50.26 48.48
CDY63998 Canola extracellular, vacuole 49.47 48.33
CDY64716 Canola extracellular, plasma membrane 49.47 48.33
Bra030111.1-P Field mustard vacuole 49.21 48.07
Bra032915.1-P Field mustard mitochondrion, plasma membrane 50.0 47.86
CDY30819 Canola mitochondrion, plasma membrane 50.0 47.86
CDY34093 Canola mitochondrion, plasma membrane 50.0 47.86
Bra010858.1-P Field mustard extracellular 48.95 47.69
AT1G28660.1 Thale cress extracellular, plasma membrane, vacuole 47.89 47.52
KRH21299 Soybean mitochondrion 50.0 47.5
AT1G28640.1 Thale cress plasma membrane 48.42 47.3
TraesCS3B01G060100.1 Wheat cytosol 28.68 47.19
CDY63997 Canola plastid 43.16 47.13
GSMUA_Achr1P24780_001 Banana endoplasmic reticulum, vacuole 50.79 47.07
CDX90162 Canola extracellular 48.16 46.92
CDY15657 Canola extracellular, plasma membrane 48.42 46.35
CDX94633 Canola extracellular 48.16 46.21
GSMUA_Achr3P25190_001 Banana plasma membrane 50.0 46.12
Bra030107.1-P Field mustard extracellular, plasma membrane 48.42 46.0
CDY43308 Canola extracellular 47.63 45.36
GSMUA_Achr11P... Banana endoplasmic reticulum, plasma membrane, vacuole 45.26 45.03
GSMUA_Achr8P30020_001 Banana endoplasmic reticulum, extracellular, plasma membrane, plastid 48.68 44.79
Os03t0365800-01 Rice extracellular, vacuole 45.53 44.7
TraesCS3D01G050700.1 Wheat extracellular 45.53 44.47
HORVU3Hr1G055350.1 Barley extracellular 46.05 44.42
TraesCS2D01G150200.1 Wheat cytosol 23.42 44.06
Os01t0649200-01 Rice cytosol 18.16 43.95
TraesCS3B01G264800.1 Wheat extracellular 45.53 43.8
GSMUA_Achr8P10360_001 Banana extracellular, vacuole 42.11 43.6
TraesCS3A01G235000.1 Wheat extracellular, vacuole 44.47 43.44
TraesCS7A01G500400.1 Wheat cytosol 20.0 43.43
Zm00001d044045_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 45.0 42.86
Os01t0649400-00 Rice mitochondrion 43.16 42.71
GSMUA_Achr8P30010_001 Banana extracellular, vacuole 40.0 42.7
Os01t0649900-01 Rice endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole 44.74 42.5
EES01172 Sorghum endoplasmic reticulum, plasma membrane, vacuole 44.47 42.36
TraesCS3A01G235500.1 Wheat extracellular 40.79 42.12
KXG20449 Sorghum mitochondrion 44.21 42.0
TraesCS3D01G232800.1 Wheat plastid 44.74 41.98
Os01t0612900-01 Rice extracellular, plasma membrane 45.0 41.91
HORVU3Hr1G058610.2 Barley extracellular 40.53 41.85
TraesCS3D01G235600.1 Wheat extracellular 40.53 41.85
HORVU7Hr1G111930.1 Barley extracellular 39.21 41.74
TraesCS3A01G219800.2 Wheat plasma membrane, vacuole 44.47 41.73
TraesCS3B01G250200.1 Wheat plasma membrane 44.47 41.73
HORVU7Hr1G111940.1 Barley extracellular 37.11 41.72
TraesCS3B01G264400.2 Wheat extracellular 40.79 41.67
Zm00001d044043_P001 Maize endoplasmic reticulum, plasma membrane 43.95 41.44
TraesCS2D01G150000.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 36.84 41.18
EER88699 Sorghum golgi, plasma membrane 42.89 41.06
TraesCS7D01G487400.1 Wheat extracellular, plasma membrane 38.68 40.95
HORVU3Hr1G058440.2 Barley plasma membrane 45.26 40.86
Zm00001d044040_P003 Maize extracellular, vacuole 40.53 40.85
Zm00001d044048_P002 Maize endoplasmic reticulum, extracellular, plasma membrane 45.79 40.85
TraesCS3D01G235900.2 Wheat extracellular, golgi, vacuole 38.95 40.77
GSMUA_Achr8P10350_001 Banana endoplasmic reticulum, nucleus, peroxisome 42.37 40.66
TraesCS7A01G500300.1 Wheat extracellular, golgi 32.63 40.66
TraesCS6A01G137600.1 Wheat cytosol 23.42 40.64
HORVU3Hr1G008280.1 Barley golgi 45.0 40.62
TraesCS7B01G407400.1 Wheat extracellular, plasma membrane 38.16 40.5
EES01175 Sorghum endoplasmic reticulum, golgi, vacuole 38.68 40.27
TraesCS7A01G500500.1 Wheat cytosol, mitochondrion 26.05 40.24
TraesCS3D01G236100.1 Wheat plastid 44.74 40.19
TraesCS2B01G171000.1 Wheat extracellular 40.26 40.16
TraesCS7A01G500200.1 Wheat extracellular, plasma membrane 37.89 40.11
TraesCS7A01G500000.1 Wheat extracellular, vacuole 39.47 40.11
HORVU7Hr1G111720.1 Barley golgi, vacuole 36.05 40.06
TraesCS3B01G070100.1 Wheat extracellular 38.68 40.05
Zm00001d044049_P001 Maize extracellular 37.89 40.0
TraesCS7B01G407600.1 Wheat cytosol, mitochondrion 25.53 39.92
TraesCS3B01G264900.1 Wheat plasma membrane, vacuole 44.74 39.91
TraesCS7D01G487100.1 Wheat extracellular, vacuole 38.95 39.89
EES16190 Sorghum extracellular 37.89 39.89
TraesCS3A01G057100.1 Wheat extracellular 39.74 39.84
TraesCS7B01G407100.1 Wheat extracellular, vacuole 39.21 39.84
TraesCS3A01G234900.1 Wheat plastid 44.21 39.81
Solyc12g096620.1.1 Tomato nucleus 39.74 39.74
TraesCS6B01G166000.1 Wheat extracellular, plasma membrane, vacuole 38.42 39.67
EES01179 Sorghum extracellular 40.79 39.64
TraesCS3D01G236000.2 Wheat mitochondrion 45.53 39.59
TraesCS6D01G126500.1 Wheat unclear 38.95 39.57
EES01174 Sorghum vacuole 37.37 39.55
TraesCS3D01G056800.1 Wheat golgi 39.21 39.52
HORVU2Hr1G025800.1 Barley extracellular 39.47 39.47
Os01t0651000-01 Rice extracellular, vacuole 38.42 39.46
TraesCS7D01G487200.1 Wheat vacuole 38.68 39.41
TraesCS7A01G500600.1 Wheat endoplasmic reticulum, vacuole 38.42 39.35
TraesCS7B01G407700.1 Wheat endoplasmic reticulum, golgi, vacuole 38.42 39.35
Zm00001d011334_P003 Maize plasma membrane, plastid 44.74 39.35
HORVU3Hr1G055330.3 Barley endoplasmic reticulum, plasma membrane 38.16 39.3
TraesCS3A01G235100.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 38.16 39.3
EES01067 Sorghum plastid 45.0 39.13
TraesCS2B01G170900.1 Wheat extracellular, vacuole 39.21 39.11
TraesCS6B01G165800.1 Wheat extracellular, plasma membrane, vacuole 38.16 39.08
Solyc01g099030.2.1 Tomato extracellular 38.42 38.93
HORVU7Hr1G111890.1 Barley extracellular, vacuole 37.89 38.92
TraesCS7D01G487000.1 Wheat vacuole 37.89 38.81
GSMUA_Achr11P... Banana extracellular 42.89 38.81
Zm00001d030707_P001 Maize extracellular, golgi 36.84 38.78
Solyc12g017460.1.1 Tomato extracellular 37.63 38.75
TraesCS3B01G285400.1 Wheat extracellular, vacuole 38.68 38.68
TraesCS6B01G165900.1 Wheat extracellular, plasma membrane, vacuole 38.95 38.64
OQU90350 Sorghum endoplasmic reticulum, mitochondrion 40.26 38.64
EES07937 Sorghum extracellular, golgi 37.37 38.59
Zm00001d011475_P001 Maize vacuole 37.37 38.59
Zm00001d044465_P001 Maize plastid 43.95 38.57
TraesCS7D01G487300.1 Wheat extracellular, golgi, vacuole 37.63 38.54
Zm00001d044050_P001 Maize golgi 37.11 38.52
HORVU2Hr1G025860.2 Barley extracellular, golgi, mitochondrion, plastid 40.0 38.48
Solyc01g099050.2.1 Tomato extracellular, golgi, vacuole 38.16 38.46
TraesCS2D01G149900.1 Wheat golgi, vacuole 39.21 38.4
TraesCS3A01G253500.1 Wheat endoplasmic reticulum, extracellular, vacuole 38.68 38.38
Os07t0642200-01 Rice endoplasmic reticulum, golgi 39.47 38.36
HORVU2Hr1G025810.1 Barley golgi 39.74 38.32
HORVU3Hr1G010920.1 Barley golgi 38.42 38.32
Os01t0650200-01 Rice golgi, mitochondrion, peroxisome, plastid 29.74 38.31
HORVU3Hr1G066310.1 Barley extracellular, plasma membrane 38.42 38.22
TraesCS2B01G170800.1 Wheat golgi 39.21 38.21
Solyc01g099020.2.1 Tomato nucleus 38.16 38.16
EES09220 Sorghum extracellular, golgi 36.84 38.04
OQU87242 Sorghum plasma membrane 45.0 38.0
TraesCS3D01G254400.1 Wheat endoplasmic reticulum, extracellular, vacuole 38.16 37.96
Solyc01g099010.2.1 Tomato extracellular 37.37 37.87
Os03t0365000-00 Rice extracellular 32.63 37.69
Zm00001d030720_P002 Maize extracellular 35.79 37.67
TraesCS6D01G126600.1 Wheat extracellular, plasma membrane, vacuole 36.58 37.57
TraesCS6A01G137500.1 Wheat extracellular, plasma membrane, vacuole 33.68 37.21
TraesCS7B01G407500.1 Wheat vacuole 38.16 36.16
Solyc01g099060.1.1 Tomato extracellular 36.05 36.05
HORVU7Hr1G111870.1 Barley extracellular 33.42 35.98
Zm00001d022309_P002 Maize endoplasmic reticulum, plasma membrane 31.58 35.93
KXG36800 Sorghum plasma membrane 40.53 35.9
Solyc01g099040.2.1 Tomato extracellular 35.79 35.79
TraesCS7D01G487800.1 Wheat extracellular, vacuole 37.63 35.66
HORVU3Hr1G058530.2 Barley extracellular, plasma membrane 30.26 34.95
OQU90347 Sorghum mitochondrion 42.11 31.87
TraesCS2D01G150100.1 Wheat mitochondrion, plastid 36.58 31.45
Os01t0650900-00 Rice vacuole 31.58 30.61
GSMUA_Achr8P28070_001 Banana plasma membrane 49.47 27.45
TraesCS3A01G235600.1 Wheat mitochondrion 1.32 1.42
Protein Annotations
EnsemblPlants:Solyc03g006250.2.1EnsemblPlantsGene:Solyc03g006250.2Gene3D:3.40.50.1110GO:GO:0003674GO:GO:0003824GO:GO:0016787
GO:GO:0016788InterPro:GDSLInterPro:IPR036514InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likePANTHER:PTHR22835
PANTHER:PTHR22835:SF298PFAM:PF00657SEG:segSignalP:SignalP-noTMSUPFAM:SSF52266UniParc:UPI00027677E6
UniProt:K4BE48MapMan:35.1::::
Description
No Description!
Coordinates
chr3:-:864048..868775
Molecular Weight (calculated)
41591.6 Da
IEP (calculated)
6.772
GRAVY (calculated)
-0.067
Length
380 amino acids
Sequence
(BLAST)
001: MASSSNSLIC IIILLITSFK HVYGSYESII SFGDSLADTG NLIRLSKSNK IVASSVLPYG ETFFHHPTGR FSDGRLVIDF IAEGMGFPLV PPYVGVMKNM
101: SSSKNSIRGV NFAVAGATAV DISYLEKRGI KNPATNVSLG TQLEWFKQML PILCDSPTSC KEYLENSLFL MGEIGGNDYN HPFSQGKSGE EVKSFVPAVI
201: SAIGQAINEL IELGAQTLIV PGNLPIGCSA SYLTIFKNSN KKDYDNSTGC IIWLNEFAEY HNQLLQQEIH KLREIHPHAN IIYADYYNAA MQIYRSPKKF
301: GFTSTIVACC GGGGVYNYDS NRPCGSPSSN YCDTPSSYVS WDGVHLTEAA YKLIAKGLLQ GPYTIPQMNY GLYNKGISDQ
Best Arabidopsis Sequence Match ( AT1G28590.1 )
(BLAST)
001: MASLDSLPAM KLVRFILSTL LVTSVNSQTQ CRNFKSIISF GDSIADTGNL LGLSDPNDLP ASAFPPYGET FFHHPTGRYS DGRLIIDFIA EFLGFPLVPP
101: FYGCQNANFK KGVNFAVAGA TALEPSFLEE RGIHSTITNV SLSVQLRSFT ESLPNLCGSP SDCRDMIENA LILMGEIGGN DYNFALFQRK PVKEVEELVP
201: FVIATISSAI TELVCMGGRT FLVPGNFPIG YSASYLTLYK TSNKEEYDPL TGCLKWLNDF SEYYNKQLQE ELNGLRKLYP HVNIIYADYY NALLRLFQEP
301: AKFGFMNRPL PACCGVGGSY NFNFSRRCGS VGVEYCDDPS QYVNYDGIHM TEAAYRLISE GLLKGPYAIP PFKWSCLSSE IMNKMSLDTQ ILDEQLLQGC
401: LKV
Arabidopsis Description
GDSL esterase/lipase At1g28590 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXT9]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.