Factsheet for Solyc01g099030.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

extracellular: 22364583
extracellular: 29876421

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

msms PMID: 22364583 doi

P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez

Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g099010.2.1	Tomato	extracellular	78.4	78.4
Solyc01g099050.2.1	Tomato	extracellular, golgi, vacuole	69.33	68.97
Solyc01g099060.1.1	Tomato	extracellular	68.53	67.63
Solyc01g099020.2.1	Tomato	nucleus	59.73	58.95
Solyc01g099040.2.1	Tomato	extracellular	58.13	57.37
VIT_14s0060g02080.t01	Wine grape	endoplasmic reticulum, vacuole	51.47	51.6
PGSC0003DMT400034309	Potato	cytosol, nucleus, plasma membrane	62.93	49.58
Bra009496.1-P	Field mustard	extracellular	46.13	47.14
CDX70269	Canola	extracellular	41.07	46.95
TraesCS3B01G151300.1	Wheat	extracellular, vacuole	46.4	46.65
CDY41414	Canola	vacuole	40.8	46.65
TraesCS3A01G308200.1	Wheat	extracellular, golgi	46.13	46.51
TraesCS3D01G134200.1	Wheat	extracellular, plasma membrane	45.87	46.24
HORVU3Hr1G024970.12	Barley	endoplasmic reticulum, vacuole	45.87	45.62
AT5G03980.1	Thale cress	vacuole	39.2	45.51
Os11t0521000-01	Rice	plasma membrane	45.07	45.31
GSMUA_Achr11P...	Banana	extracellular	43.2	43.32
EES09797	Sorghum	plasma membrane	44.0	42.64
TraesCS7D01G421100.1	Wheat	endoplasmic reticulum, extracellular	40.53	41.76
TraesCS7A01G430000.1	Wheat	extracellular	41.6	41.49
TraesCS7D01G421900.1	Wheat	endoplasmic reticulum, extracellular, vacuole	41.6	41.38
TraesCS7A01G428800.1	Wheat	extracellular	40.8	41.35
TraesCS7D01G421200.1	Wheat	endoplasmic reticulum, extracellular	41.33	41.11
TraesCS7B01G329000.1	Wheat	extracellular	40.53	41.08
TraesCS6B01G240600.1	Wheat	vacuole	42.93	41.07
HORVU6Hr1G053960.1	Barley	vacuole	42.93	40.86
TraesCS7A01G429100.2	Wheat	extracellular	40.53	40.53
TraesCS6A01G211100.1	Wheat	extracellular, plasma membrane, vacuole	42.93	40.35
TraesCS6D01G194200.1	Wheat	vacuole	42.67	40.1
TraesCS7B01G329200.1	Wheat	extracellular	40.0	40.0
Os06t0694200-01	Rice	extracellular	40.27	39.84
Os02t0608801-00	Rice	extracellular	42.4	39.45
Solyc03g006240.2.1	Tomato	nucleus	38.67	39.4
Solyc12g017460.1.1	Tomato	extracellular	38.67	39.3
Zm00001d007351_P001	Maize	plasma membrane	43.73	38.95
OQU85266	Sorghum	extracellular	41.33	38.85
Solyc03g006250.2.1	Tomato	extracellular	38.93	38.42
KXG30582	Sorghum	vacuole	39.73	38.01
TraesCS1D01G250200.1	Wheat	extracellular, vacuole	41.07	37.75
Solyc02g077120.2.1	Tomato	cytosol	21.33	37.56
Zm00001d014596_P001	Maize	endoplasmic reticulum, vacuole	40.27	37.47
HORVU7Hr1G098600.2	Barley	endoplasmic reticulum, extracellular, plasma membrane	41.33	37.44
HORVU1Hr1G061910.1	Barley	endoplasmic reticulum, golgi, mitochondrion	41.07	37.2
TraesCS1B01G261200.1	Wheat	endoplasmic reticulum, mitochondrion, vacuole	40.27	37.1
EES05386	Sorghum	extracellular, vacuole	41.6	37.05
TraesCS1A01G250600.1	Wheat	endoplasmic reticulum	40.0	36.95
Zm00001d017140_P001	Maize	endoplasmic reticulum, extracellular	40.0	36.85
Solyc12g096620.1.1	Tomato	nucleus	37.33	36.84
Solyc10g008720.2.1	Tomato	extracellular	37.87	36.6
KXG20727	Sorghum	endoplasmic reticulum, extracellular, vacuole	40.27	35.87
TraesCS7B01G329900.1	Wheat	extracellular	41.6	35.62
Os02t0604000-00	Rice	extracellular	38.4	35.47
Solyc10g008710.2.1	Tomato	extracellular	34.4	34.13
HORVU7Hr1G098580.5	Barley	mitochondrion	30.93	28.5

Protein Annotations

EnsemblPlants:Solyc01g099030.2.1	EnsemblPlantsGene:Solyc01g099030.2	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	PANTHER:PTHR22835
PANTHER:PTHR22835:SF289	PFAM:PF00657	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52266	UniParc:UPI0002768B66
UniProt:K4B0U0	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr1:-:89371798..89375708

Molecular Weight (calculated)

41794.3 Da

IEP (calculated)

5.855

GRAVY (calculated)

0.003

Length

375 amino acids

Sequence
(BLAST)

001: MATTVTLLLS LLILMVKVGE AEQVLKLQNP RLLNCRFDKI YQFGDSLSDT GNCIRETLCG ATLSCGTLPY GMDFYQNATG RCSNGMLIID FIAVESGLPL
101: LNPFKDENAD FRHGVNFAVA GSTALSAKSL AEKNIVNIAL TNSSLSVQLD WMSSHFQTTC SPDCPEKLNK SLFLVGEIGG NEFIYGLSQG KSMDESRKMV
201: PEIVQTIIHG VERIIGFGAT QIIVPGNFPI GCHPIFLTKF MTNISTAYDE YHCLKELNNF AIFFNRYLQQ AIDELKKDYP NITLIYGDYY NAFLWLLQNA
301: DGLGFDNKSL QKACCGIGGE YNYDVHRRCG APRVPVCVDP STHISWDGVH LTQNAYRWIA RWLIDDTLPK LNCQV

Best Arabidopsis Sequence Match ( AT5G03980.1 )
(BLAST)

001: MSTTKALSLL VFILFVSLVH SSDQCPINSI YQFGDSISDT GNLIRNGPAS SPTPKPLPQR EHNVFVNFGV SGSTALNSSF FSERNLHVPA TNTPLSMQLA
101: WFKGHLRSTC HGSSSDCLKH SLFMVGEIGG NDYNYGFFQG KPMEEIRSYI PHVVGAITAA AREVIRAGAV NVVVPGNFPV GCFPIYLTSF PVKDTKDYDD
201: NGCLTHLNEF AMDHNNQLQE AIASLRKEFP DVAIVYGDYY NAFQYVLRSE RFDKSVALKS CCGTGGAYNY DGKRPYGAVG VPVCQNPHKF ISWDGVHLTQ
301: KAYRFMSKFL NNQILSQIKC TRA

Arabidopsis Description

GDSL esterase/lipase At5g03980 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZB2]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.