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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 9
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG30582 Sorghum vacuole 90.48 92.09
Os02t0608801-00 Rice extracellular 74.44 73.7
TraesCS6B01G240600.1 Wheat vacuole 71.43 72.7
HORVU6Hr1G053960.1 Barley vacuole 70.68 71.57
TraesCS6D01G194200.1 Wheat vacuole 71.43 71.43
TraesCS6A01G211100.1 Wheat extracellular, plasma membrane, vacuole 71.18 71.18
EES05386 Sorghum extracellular, vacuole 56.14 53.21
Bra009496.1-P Field mustard extracellular 42.11 45.78
EES09797 Sorghum plasma membrane 43.61 44.96
KXG20727 Sorghum endoplasmic reticulum, extracellular, vacuole 47.37 44.89
CDX70269 Canola extracellular 36.84 44.82
CDY41414 Canola vacuole 36.34 44.21
VIT_14s0060g02080.t01 Wine grape endoplasmic reticulum, vacuole 40.85 43.58
PGSC0003DMT400063633 Potato cytosol 27.07 43.2
PGSC0003DMT400063639 Potato cytosol 38.6 42.54
AT5G03980.1 Thale cress vacuole 33.83 41.8
Solyc01g099030.2.1 Tomato extracellular 38.85 41.33
Solyc01g099020.2.1 Tomato nucleus 38.35 40.26
PGSC0003DMT400048871 Potato extracellular 36.84 39.62
EES02257 Sorghum endoplasmic reticulum 37.34 39.31
Solyc01g099050.2.1 Tomato extracellular, golgi, vacuole 37.09 39.26
Solyc01g099060.1.1 Tomato extracellular 37.09 38.95
PGSC0003DMT400067663 Potato extracellular 36.59 38.73
Solyc01g099040.2.1 Tomato extracellular 36.84 38.68
Solyc01g099010.2.1 Tomato extracellular 36.34 38.67
PGSC0003DMT400034313 Potato cytosol 29.57 37.82
EES00052 Sorghum golgi 33.83 36.49
EES00053 Sorghum extracellular 34.34 36.24
EES02259 Sorghum plasma membrane 34.34 36.15
EER87874 Sorghum extracellular, plasma membrane 34.59 35.57
EES17880 Sorghum golgi 34.09 35.51
EES01175 Sorghum endoplasmic reticulum, golgi, vacuole 32.33 35.34
EES02254 Sorghum extracellular 33.08 35.01
KXG21541 Sorghum extracellular 32.08 34.97
EES02253 Sorghum endoplasmic reticulum, extracellular 33.33 34.91
EES01174 Sorghum vacuole 31.33 34.82
EES01179 Sorghum extracellular 34.09 34.78
EER89867 Sorghum extracellular 32.33 34.49
KXG21542 Sorghum extracellular 28.57 34.23
OQU90350 Sorghum endoplasmic reticulum, mitochondrion 33.83 34.09
EES07937 Sorghum extracellular, golgi 31.33 33.97
KXG31572 Sorghum extracellular 33.08 33.93
EES06644 Sorghum extracellular, plasma membrane, vacuole 30.83 33.7
EES17878 Sorghum extracellular 30.58 33.52
KXG19336 Sorghum extracellular, plasma membrane 30.33 33.43
PGSC0003DMT400034315 Potato cytosol 30.58 33.33
EER89228 Sorghum extracellular, golgi 30.33 32.97
EER89868 Sorghum golgi, mitochondrion, plastid 32.83 32.83
EES09220 Sorghum extracellular, golgi 30.08 32.61
EES02226 Sorghum extracellular, vacuole 33.83 32.61
EES17881 Sorghum endoplasmic reticulum 32.08 32.41
EES02260 Sorghum golgi, vacuole 29.57 32.15
EES16190 Sorghum extracellular 29.07 32.13
EES04851 Sorghum extracellular 30.58 32.02
OQU78788 Sorghum cytosol 28.32 31.83
EES02264 Sorghum extracellular 28.82 31.68
EES01067 Sorghum plastid 34.09 31.12
EES05213 Sorghum plasma membrane 29.82 30.59
EES01172 Sorghum endoplasmic reticulum, plasma membrane, vacuole 30.58 30.58
EER88699 Sorghum golgi, plasma membrane 30.33 30.48
KXG20449 Sorghum mitochondrion 30.33 30.25
KXG31571 Sorghum extracellular, plasma membrane, plastid 30.08 30.23
KXG36800 Sorghum plasma membrane 31.08 28.9
OQU87242 Sorghum plasma membrane 31.08 27.56
OQU90347 Sorghum mitochondrion 33.58 26.69
PGSC0003DMT400034309 Potato cytosol, nucleus, plasma membrane 28.32 23.74
Protein Annotations
EnsemblPlants:OQU85266EnsemblPlantsGene:SORBI_3004G207800EntrezGene:8056500Gene3D:3.40.50.1110GO:GO:0003674GO:GO:0003824
GO:GO:0016787GO:GO:0016788InterPro:GDSLInterPro:IPR036514InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835PANTHER:PTHR22835:SF289PFAM:PF00657ProteinID:OQU85266ProteinID:OQU85266.1RefSeq:XP_002452415.1
SEG:segSignalP:SignalP-noTMUniParc:UPI0001A852C4UniProt:A0A1Z5RPF4MapMan:35.1:
Description
hypothetical protein
Coordinates
chr4:+:55800194..55801393
Molecular Weight (calculated)
42213.3 Da
IEP (calculated)
5.858
GRAVY (calculated)
0.042
Length
399 amino acids
Sequence
(BLAST)
001: MARILLAAFV ALLVVVSPCH ERPAPAPQQA AKEKVVAVDG ITAIYNFGDS LSDTGNLLRE GATGMLQHTT GLPYGSAIGG ATGRCSDGYL MIDYLAKDLG
101: LPLLNPYLDD GADFSHGVNF AVAGATALDA AALARRGVAV PHTNSSLGVQ LQRFKDFMSA NTQSPEEIRE KLAHSLVMVG EIGGNDYNYA FSANKPVAGG
201: ARNIYNFGRM ATGVAEAMAL VPDVVRSVTS AARELLDMGA TRVVIPGNFP LGCVPSYMAA VNETDPAAYD ANGCLAALNL FAQMHNVLLQ QGIRELRRSY
301: PSATISYADY FYAYVRMLRD AGKTGFDEGA RTTACCGAGG GAYNFDMDRM CGAPGASVCA RPDERISWDG VHLTQRANSV MSDLLYHKGF ASPAPVEFP
Best Arabidopsis Sequence Match ( AT1G28570.1 )
(BLAST)
001: MATLFMKLVS FFLILSTFCL TTVNSEPQCH NFKSIISFGD SIADTGNLLA LSDPTNLPKV AFLPYGETFF HHPTGRFSNG RLIIDFIAEF LGFPLVPPFY
101: GSQNANFEKG VNFAVGGATA LERSFLEERG IHFPYTNVSL AVQLSSFKES LPNLCVSPSD CRDMIENSLI LMGEIGGNDY NYAFFVGKNI EEIKELVPLV
201: IETISSAITE LIGMGGKTFL VPGEFPLGCS VAYLSLYQTS NIEEYDPLTG CLKWLNKFSE YHDEQLQAEL NRLQKLYPHV NIIYADYYNT LLRLAQEPAK
301: FGFISRPLPA CCALGGPFNF TLGRKRGTQV PECCDDPSKY VSWDGVHMTE AAYRLMAEGI LKGPYAIPPF DWSCLSSEIK NTQNSLMNN
Arabidopsis Description
GDSL esterase/lipase At1g28570 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXJ1]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.