Factsheet for PGSC0003DMT400048871

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	golgi
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g099010.2.1	Tomato	extracellular	91.37	90.4
PGSC0003DMT400063633	Potato	cytosol	50.4	74.8
PGSC0003DMT400063639	Potato	cytosol	67.66	69.34
PGSC0003DMT400067663	Potato	extracellular	68.73	67.64
PGSC0003DMT400034315	Potato	cytosol	60.92	61.75
PGSC0003DMT400034313	Potato	cytosol	46.63	55.45
VIT_14s0060g02080.t01	Wine grape	endoplasmic reticulum, vacuole	52.83	52.41
Bra009496.1-P	Field mustard	extracellular	45.28	45.78
CDX70269	Canola	extracellular	39.89	45.12
TraesCS3B01G151300.1	Wheat	extracellular, vacuole	45.28	45.04
TraesCS3D01G134200.1	Wheat	extracellular, plasma membrane	45.01	44.89
TraesCS3A01G308200.1	Wheat	extracellular, golgi	45.01	44.89
CDY41414	Canola	vacuole	39.62	44.82
PGSC0003DMT400034309	Potato	cytosol, nucleus, plasma membrane	56.87	44.33
HORVU3Hr1G024970.12	Barley	endoplasmic reticulum, vacuole	45.01	44.3
AT5G03980.1	Thale cress	vacuole	38.01	43.65
Os11t0521000-01	Rice	plasma membrane	43.4	43.16
GSMUA_Achr11P...	Banana	extracellular	43.13	42.78
TraesCS7D01G421100.1	Wheat	endoplasmic reticulum, extracellular	41.24	42.03
TraesCS7A01G430000.1	Wheat	extracellular	42.59	42.02
TraesCS7D01G421200.1	Wheat	endoplasmic reticulum, extracellular	42.32	41.64
TraesCS7D01G421900.1	Wheat	endoplasmic reticulum, extracellular, vacuole	42.32	41.64
TraesCS7A01G428800.1	Wheat	extracellular	41.24	41.35
TraesCS7B01G329000.1	Wheat	extracellular	41.24	41.35
EES09797	Sorghum	plasma membrane	43.13	41.34
TraesCS7A01G429100.2	Wheat	extracellular	41.78	41.33
TraesCS7B01G329200.1	Wheat	extracellular	41.51	41.07
PGSC0003DMT400016546	Potato	endoplasmic reticulum, vacuole	40.7	40.92
PGSC0003DMT400016547	Potato	extracellular	37.2	40.23
HORVU6Hr1G053960.1	Barley	vacuole	42.05	39.59
TraesCS6B01G240600.1	Wheat	vacuole	41.78	39.54
PGSC0003DMT400011187	Potato	plasma membrane	39.62	39.52
PGSC0003DMT400016545	Potato	plastid	33.69	38.7
Os06t0694200-01	Rice	extracellular	39.35	38.52
TraesCS6D01G194200.1	Wheat	vacuole	41.24	38.35
Os02t0608801-00	Rice	extracellular	41.51	38.21
HORVU7Hr1G098600.2	Barley	endoplasmic reticulum, extracellular, plasma membrane	42.59	38.16
TraesCS6A01G211100.1	Wheat	extracellular, plasma membrane, vacuole	40.97	38.1
Zm00001d007351_P001	Maize	plasma membrane	42.86	37.77
PGSC0003DMT400011185	Potato	endoplasmic reticulum, extracellular, vacuole	38.81	37.6
Zm00001d017140_P001	Maize	endoplasmic reticulum, extracellular	40.97	37.35
PGSC0003DMT400075261	Potato	cytosol	35.31	37.32
Zm00001d014596_P001	Maize	endoplasmic reticulum, vacuole	40.16	36.97
OQU85266	Sorghum	extracellular	39.62	36.84
PGSC0003DMT400026549	Potato	extracellular, vacuole	39.62	36.75
TraesCS1D01G250200.1	Wheat	extracellular, vacuole	40.16	36.52
HORVU1Hr1G061910.1	Barley	endoplasmic reticulum, golgi, mitochondrion	40.43	36.23
TraesCS7B01G329900.1	Wheat	extracellular	42.59	36.07
TraesCS1A01G250600.1	Wheat	endoplasmic reticulum	39.08	35.71
KXG30582	Sorghum	vacuole	37.74	35.71
EES05386	Sorghum	extracellular, vacuole	40.43	35.63
KXG20727	Sorghum	endoplasmic reticulum, extracellular, vacuole	40.43	35.63
TraesCS1B01G261200.1	Wheat	endoplasmic reticulum, mitochondrion, vacuole	39.08	35.63
Os02t0604000-00	Rice	extracellular	36.66	33.5
HORVU7Hr1G098580.5	Barley	mitochondrion	31.27	28.5

Protein Annotations

EnsemblPlants:PGSC0003DMT400048871	EnsemblPlantsGene:PGSC0003DMG400018990	EntrezGene:102597603	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835	PANTHER:PTHR22835:SF289	PFAM:PF00657	PGSC:PGSC0003DMG400018990	RefSeq:XP_006361896.1	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF52266	UniParc:UPI000296A9FC	UniProt:M1BMZ1	MapMan:35.1	:

Description

Alpha-L-fucosidase 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400018990]

Coordinates

chr1:-:76618567..76621581

Molecular Weight (calculated)

41623.9 Da

IEP (calculated)

5.156

GRAVY (calculated)

-0.032

Length

371 amino acids

Sequence
(BLAST)

001: MAATIALLLS LLILGDAQQV LKLQNPRLMN CRFDKIYQFG DSISDTGNCI RETLCEVQSW CKRPPYGINF YQNVTGRCSN GMLIIDFIAV ECGLPLLNPY
101: KDENAEFRHG VNFAVAGSTA VSAEFLAENN IDNIGATNSS LSVQLDWMSS HFHTTCSPNC PEKLNNSLFL VGEIGGNEFN FGLLQGKTIE ELRRIVPQVV
201: QTIIHAVKRI IGFGATRIIV PGNFPIGCIP LFLTEFMTNN STAYDEHHCL KDLNNFVIFY NRYLQQAIDE LKKDYPNITL IYGDNYNAFM WLLENAVSLG
301: FDNNSLQKAC CGIGGEYNYN GHRSCGDPMV PVCVDPNTHI SWDGIHFTQN AYSWLARWLI DDMLPKLNCQ V

Best Arabidopsis Sequence Match ( AT5G03980.1 )
(BLAST)

001: MSTTKALSLL VFILFVSLVH SSDQCPINSI YQFGDSISDT GNLIRNGPAS SPTPKPLPQR EHNVFVNFGV SGSTALNSSF FSERNLHVPA TNTPLSMQLA
101: WFKGHLRSTC HGSSSDCLKH SLFMVGEIGG NDYNYGFFQG KPMEEIRSYI PHVVGAITAA AREVIRAGAV NVVVPGNFPV GCFPIYLTSF PVKDTKDYDD
201: NGCLTHLNEF AMDHNNQLQE AIASLRKEFP DVAIVYGDYY NAFQYVLRSE RFDKSVALKS CCGTGGAYNY DGKRPYGAVG VPVCQNPHKF ISWDGVHLTQ
301: KAYRFMSKFL NNQILSQIKC TRA

Arabidopsis Description

GDSL esterase/lipase At5g03980 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZB2]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.