Factsheet for PGSC0003DMT400034315

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400063633	Potato	cytosol	53.28	78.0
Solyc01g099050.2.1	Tomato	extracellular, golgi, vacuole	74.86	72.68
PGSC0003DMT400048871	Potato	extracellular	61.75	60.92
PGSC0003DMT400067663	Potato	extracellular	59.56	57.82
PGSC0003DMT400063639	Potato	cytosol	57.1	57.73
PGSC0003DMT400034313	Potato	cytosol	45.63	53.53
VIT_14s0060g02080.t01	Wine grape	endoplasmic reticulum, vacuole	43.44	42.51
PGSC0003DMT400034309	Potato	cytosol, nucleus, plasma membrane	49.73	38.24
GSMUA_Achr11P...	Banana	extracellular	37.7	36.9
Bra009496.1-P	Field mustard	extracellular	36.34	36.24
TraesCS3A01G308200.1	Wheat	extracellular, golgi	36.61	36.02
TraesCS3D01G134200.1	Wheat	extracellular, plasma membrane	36.61	36.02
TraesCS3B01G151300.1	Wheat	extracellular, vacuole	36.61	35.92
HORVU3Hr1G024970.12	Barley	endoplasmic reticulum, vacuole	36.34	35.28
CDX70269	Canola	extracellular	31.42	35.06
CDY41414	Canola	vacuole	31.42	35.06
EES09797	Sorghum	plasma membrane	35.79	33.85
TraesCS7D01G421100.1	Wheat	endoplasmic reticulum, extracellular	33.61	33.79
AT5G03980.1	Thale cress	vacuole	29.78	33.75
PGSC0003DMT400011187	Potato	plasma membrane	34.15	33.6
Os11t0521000-01	Rice	plasma membrane	34.15	33.51
TraesCS7B01G329000.1	Wheat	extracellular	33.33	32.97
HORVU6Hr1G053960.1	Barley	vacuole	34.97	32.49
TraesCS7A01G430000.1	Wheat	extracellular	33.33	32.45
TraesCS6B01G240600.1	Wheat	vacuole	34.7	32.4
TraesCS7D01G421200.1	Wheat	endoplasmic reticulum, extracellular	33.33	32.36
TraesCS7A01G428800.1	Wheat	extracellular	32.51	32.16
TraesCS7D01G421900.1	Wheat	endoplasmic reticulum, extracellular, vacuole	33.06	32.1
TraesCS7A01G429100.2	Wheat	extracellular	32.79	32.0
TraesCS7B01G329200.1	Wheat	extracellular	32.79	32.0
TraesCS1D01G250200.1	Wheat	extracellular, vacuole	35.25	31.62
TraesCS6D01G194200.1	Wheat	vacuole	34.43	31.58
TraesCS6A01G211100.1	Wheat	extracellular, plasma membrane, vacuole	34.43	31.58
PGSC0003DMT400016547	Potato	extracellular	29.51	31.49
HORVU1Hr1G061910.1	Barley	endoplasmic reticulum, golgi, mitochondrion	35.52	31.4
TraesCS1A01G250600.1	Wheat	endoplasmic reticulum	34.7	31.28
Zm00001d017140_P001	Maize	endoplasmic reticulum, extracellular	34.7	31.2
Os06t0694200-01	Rice	extracellular	32.24	31.13
Os02t0608801-00	Rice	extracellular	34.15	31.02
PGSC0003DMT400016546	Potato	endoplasmic reticulum, vacuole	31.15	30.89
PGSC0003DMT400011185	Potato	endoplasmic reticulum, extracellular, vacuole	32.24	30.81
OQU85266	Sorghum	extracellular	33.33	30.58
TraesCS1B01G261200.1	Wheat	endoplasmic reticulum, mitochondrion, vacuole	33.88	30.47
Zm00001d007351_P001	Maize	plasma membrane	34.97	30.4
Zm00001d014596_P001	Maize	endoplasmic reticulum, vacuole	33.06	30.02
HORVU7Hr1G098600.2	Barley	endoplasmic reticulum, extracellular, plasma membrane	33.88	29.95
PGSC0003DMT400075261	Potato	cytosol	28.42	29.63
EES05386	Sorghum	extracellular, vacuole	33.88	29.45
PGSC0003DMT400016545	Potato	plastid	25.96	29.41
KXG30582	Sorghum	vacuole	30.6	28.57
PGSC0003DMT400026549	Potato	extracellular, vacuole	31.15	28.5
TraesCS7B01G329900.1	Wheat	extracellular	33.88	28.31
KXG20727	Sorghum	endoplasmic reticulum, extracellular, vacuole	32.51	28.27
Os02t0604000-00	Rice	extracellular	30.6	27.59
HORVU7Hr1G098580.5	Barley	mitochondrion	23.22	20.88

Protein Annotations

EnsemblPlants:PGSC0003DMT400034315	EnsemblPlantsGene:PGSC0003DMG400013195	Gene3D:3.40.50.1110	InterPro:IPR036514	InterPro:SGNH_hydro_sf	PANTHER:PTHR22835
PANTHER:PTHR22835:SF289	PGSC:PGSC0003DMG400013195	UniParc:UPI000296BFA9	UniProt:M1B0H0	MapMan:35.1	:

Description

Alpha-L-fucosidase 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400013195]

Coordinates

chr1:-:76797338..76803095

Molecular Weight (calculated)

41242.2 Da

IEP (calculated)

6.566

GRAVY (calculated)

-0.301

Length

366 amino acids

Sequence
(BLAST)

001: MQEGERLPFS GSEQRRMSRG DDLHHENSIT NDDQEKSDAQ EIIKLEKPRL RNCKIDRIYQ FGDSISDTGN CIREPLCQSH SDCGSHPYGI NFYQNATGRC
101: SDGMIMIDFI ALESGLPLLN PYKDRSANFR HGVNFAVAGC TGISAEIMAE NKIFNTAFTN SSLTVQLDWM SSHFETTCTI GKLKKSLFLV GEIGGNEFNY
201: GLLQGKTIEE LRRMVPTVVQ TIIHGVKRVI DFGATRIIVP GNFPIGCVPI FLTRFMTDNS NAYDEYHCLK DLNNFSIFFN NHLQQAIDEM KKKHPNITLI
301: YGDYYNAYMW LLQNAVRFAL ECGLPILNPS MEENANFSHG ENFAVSGATA LSIESLAKKK IHVIHK

Best Arabidopsis Sequence Match ( AT1G28570.1 )
(BLAST)

001: MATLFMKLVS FFLILSTFCL TTVNSEPQCH NFKSIISFGD SIADTGNLLA LSDPTNLPKV AFLPYGETFF HHPTGRFSNG RLIIDFIAEF LGFPLVPPFY
101: GSQNANFEKG VNFAVGGATA LERSFLEERG IHFPYTNVSL AVQLSSFKES LPNLCVSPSD CRDMIENSLI LMGEIGGNDY NYAFFVGKNI EEIKELVPLV
201: IETISSAITE LIGMGGKTFL VPGEFPLGCS VAYLSLYQTS NIEEYDPLTG CLKWLNKFSE YHDEQLQAEL NRLQKLYPHV NIIYADYYNT LLRLAQEPAK
301: FGFISRPLPA CCALGGPFNF TLGRKRGTQV PECCDDPSKY VSWDGVHMTE AAYRLMAEGI LKGPYAIPPF DWSCLSSEIK NTQNSLMNN

Arabidopsis Description

GDSL esterase/lipase At1g28570 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXJ1]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.