Factsheet for VIT_14s0060g02080.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400063633	Potato	cytosol	37.7	56.4
PGSC0003DMT400063639	Potato	cytosol	53.21	54.97
PGSC0003DMT400048871	Potato	extracellular	52.41	52.83
Solyc01g099010.2.1	Tomato	extracellular	52.41	52.27
Solyc01g099030.2.1	Tomato	extracellular	51.6	51.47
Solyc01g099060.1.1	Tomato	extracellular	52.14	51.32
PGSC0003DMT400067663	Potato	extracellular	51.07	50.66
Solyc01g099050.2.1	Tomato	extracellular, golgi, vacuole	49.73	49.34
Solyc01g099040.2.1	Tomato	extracellular	49.73	48.95
Solyc01g099020.2.1	Tomato	nucleus	49.47	48.68
Bra009496.1-P	Field mustard	extracellular	47.59	48.5
GSMUA_Achr11P...	Banana	extracellular	48.4	48.4
CDY41414	Canola	vacuole	41.98	47.87
CDX70269	Canola	extracellular	41.71	47.56
TraesCS3B01G151300.1	Wheat	extracellular, vacuole	47.06	47.19
TraesCS3A01G308200.1	Wheat	extracellular, golgi	46.79	47.04
TraesCS3D01G134200.1	Wheat	extracellular, plasma membrane	46.79	47.04
HORVU3Hr1G024970.12	Barley	endoplasmic reticulum, vacuole	47.06	46.68
AT5G03980.1	Thale cress	vacuole	40.11	46.44
Os11t0521000-01	Rice	plasma membrane	46.26	46.38
PGSC0003DMT400034313	Potato	cytosol	38.24	45.83
TraesCS7A01G429100.2	Wheat	extracellular	44.92	44.8
TraesCS7D01G421200.1	Wheat	endoplasmic reticulum, extracellular	44.92	44.56
TraesCS7D01G421100.1	Wheat	endoplasmic reticulum, extracellular	43.32	44.51
TraesCS7A01G430000.1	Wheat	extracellular	44.65	44.41
TraesCS7B01G329000.1	Wheat	extracellular	43.85	44.32
TraesCS7A01G428800.1	Wheat	extracellular	43.85	44.32
TraesCS7B01G329200.1	Wheat	extracellular	44.12	44.0
TraesCS7D01G421900.1	Wheat	endoplasmic reticulum, extracellular, vacuole	44.12	43.77
EES09797	Sorghum	plasma membrane	45.19	43.67
PGSC0003DMT400034315	Potato	cytosol	42.51	43.44
TraesCS6B01G240600.1	Wheat	vacuole	44.65	42.6
Os06t0694200-01	Rice	extracellular	43.05	42.48
EES05386	Sorghum	extracellular, vacuole	45.99	40.86
TraesCS6D01G194200.1	Wheat	vacuole	43.58	40.85
OQU85266	Sorghum	extracellular	43.58	40.85
HORVU6Hr1G053960.1	Barley	vacuole	42.78	40.61
TraesCS6A01G211100.1	Wheat	extracellular, plasma membrane, vacuole	43.32	40.6
TraesCS1D01G250200.1	Wheat	extracellular, vacuole	44.12	40.44
TraesCS1B01G261200.1	Wheat	endoplasmic reticulum, mitochondrion, vacuole	43.85	40.29
Zm00001d014596_P001	Maize	endoplasmic reticulum, vacuole	43.32	40.2
TraesCS1A01G250600.1	Wheat	endoplasmic reticulum	43.58	40.15
HORVU1Hr1G061910.1	Barley	endoplasmic reticulum, golgi, mitochondrion	44.38	40.1
Zm00001d017140_P001	Maize	endoplasmic reticulum, extracellular	43.32	39.8
Os02t0608801-00	Rice	extracellular	42.78	39.7
HORVU7Hr1G098600.2	Barley	endoplasmic reticulum, extracellular, plasma membrane	43.85	39.61
Zm00001d007351_P001	Maize	plasma membrane	44.38	39.43
KXG20727	Sorghum	endoplasmic reticulum, extracellular, vacuole	44.12	39.19
KXG30582	Sorghum	vacuole	40.64	38.78
TraesCS7B01G329900.1	Wheat	extracellular	44.38	37.9
Os02t0604000-00	Rice	extracellular	39.3	36.21
HORVU7Hr1G098580.5	Barley	mitochondrion	32.35	29.73
PGSC0003DMT400034309	Potato	cytosol, nucleus, plasma membrane	37.17	29.2
VIT_10s0003g01010.t01	Wine grape	cytosol	40.11	20.03

Protein Annotations

EntrezGene:100252867	wikigene:100252867	Gene3D:3.40.50.1110	MapMan:35.1	ProteinID:CBI39527	ProteinID:CBI39527.3
ncoils:Coil	UniProt:D7U9W3	EMBL:FN596746	InterPro:GDSL	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0016788	InterPro:IPR036514	EntrezGene:LOC100252867	wikigene:LOC100252867	PFAM:PF00657
PANTHER:PTHR22835	PANTHER:PTHR22835:SF289	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	SUPFAM:SSF52266	SignalP:SignalP-noTM
UniParc:UPI00015C94D3	ArrayExpress:VIT_14s0060g02080	EnsemblPlantsGene:VIT_14s0060g02080	EnsemblPlants:VIT_14s0060g02080.t01	RefSeq:XP_002279349	RefSeq:XP_002279349.1

Description

No Description!

Coordinates

chr14:-:1664971..1666974

Molecular Weight (calculated)

41423.2 Da

IEP (calculated)

4.618

GRAVY (calculated)

-0.005

Length

374 amino acids

Sequence
(BLAST)

001: MSTIQEDFQL VLISTLLFLV FSSSCDAQPF RRCKFDSIYQ LGDSISDTGN LIIESSLGAA TPCSRLPYGE TFFNEPTGRC SNGLLMIDHV ALEAGLPFLN
101: PYLKKDSDFS HGVNFAVTGA TALSTSFLAA KGVISPVTNS SLNVQLDRMS SFFSSAFHND TDRAQELKDA LFLVGEIGGN DFNFAFFQGK TIEEEKSIVP
201: DVVQIISDAV RRVIQYGARR VVVPGNFPIG CLPIYLTVFK TNNTAAYDEF NCLKGFNDFA EYYNERLQQA IEELRNENPD TVIVYADYYN AFQWLFRNAL
301: FLGLDPASLL KACCGAGGEY NYDRARTCGA PGVQACPDPD RLVHWDGIHL TQKASMLIAK WLIQDILPKL QCNA

Best Arabidopsis Sequence Match ( AT1G28590.1 )
(BLAST)

001: MASLDSLPAM KLVRFILSTL LVTSVNSQTQ CRNFKSIISF GDSIADTGNL LGLSDPNDLP ASAFPPYGET FFHHPTGRYS DGRLIIDFIA EFLGFPLVPP
101: FYGCQNANFK KGVNFAVAGA TALEPSFLEE RGIHSTITNV SLSVQLRSFT ESLPNLCGSP SDCRDMIENA LILMGEIGGN DYNFALFQRK PVKEVEELVP
201: FVIATISSAI TELVCMGGRT FLVPGNFPIG YSASYLTLYK TSNKEEYDPL TGCLKWLNDF SEYYNKQLQE ELNGLRKLYP HVNIIYADYY NALLRLFQEP
301: AKFGFMNRPL PACCGVGGSY NFNFSRRCGS VGVEYCDDPS QYVNYDGIHM TEAAYRLISE GLLKGPYAIP PFKWSCLSSE IMNKMSLDTQ ILDEQLLQGC
401: LKV

Arabidopsis Description

GDSL esterase/lipase At1g28590 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXT9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.