Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g099040.2.1 | Tomato | extracellular | 66.32 | 66.32 |
| Solyc01g099030.2.1 | Tomato | extracellular | 58.95 | 59.73 |
| Solyc01g099010.2.1 | Tomato | extracellular | 56.32 | 57.07 |
| Solyc01g099060.1.1 | Tomato | extracellular | 56.05 | 56.05 |
| Solyc01g099050.2.1 | Tomato | extracellular, golgi, vacuole | 55.26 | 55.7 |
| PGSC0003DMT400067663 | Potato | extracellular | 55.0 | 55.44 |
| VIT_14s0060g02080.t01 | Wine grape | endoplasmic reticulum, vacuole | 48.68 | 49.47 |
| TraesCS3B01G151300.1 | Wheat | extracellular, vacuole | 43.42 | 44.24 |
| TraesCS3A01G308200.1 | Wheat | extracellular, golgi | 43.16 | 44.09 |
| TraesCS3D01G134200.1 | Wheat | extracellular, plasma membrane | 43.16 | 44.09 |
| HORVU3Hr1G024970.12 | Barley | endoplasmic reticulum, vacuole | 43.42 | 43.77 |
| Bra009496.1-P | Field mustard | extracellular | 41.84 | 43.32 |
| CDX70269 | Canola | extracellular | 37.11 | 42.99 |
| CDY41414 | Canola | vacuole | 37.11 | 42.99 |
| AT5G03980.1 | Thale cress | vacuole | 35.0 | 41.18 |
| Os11t0521000-01 | Rice | plasma membrane | 40.0 | 40.75 |
| HORVU6Hr1G053960.1 | Barley | vacuole | 41.05 | 39.59 |
| TraesCS6B01G240600.1 | Wheat | vacuole | 40.53 | 39.29 |
| GSMUA_Achr11P... | Banana | extracellular | 38.42 | 39.04 |
| Solyc02g077120.2.1 | Tomato | cytosol | 21.84 | 38.97 |
| EES09797 | Sorghum | plasma membrane | 39.47 | 38.76 |
| TraesCS7A01G428800.1 | Wheat | extracellular | 37.37 | 38.38 |
| OQU85266 | Sorghum | extracellular | 40.26 | 38.35 |
| TraesCS6A01G211100.1 | Wheat | extracellular, plasma membrane, vacuole | 40.26 | 38.35 |
| TraesCS6D01G194200.1 | Wheat | vacuole | 40.26 | 38.35 |
| Solyc12g017460.1.1 | Tomato | extracellular | 37.11 | 38.21 |
| TraesCS7D01G421100.1 | Wheat | endoplasmic reticulum, extracellular | 36.58 | 38.19 |
| Solyc03g006250.2.1 | Tomato | extracellular | 38.16 | 38.16 |
| Solyc12g096620.1.1 | Tomato | nucleus | 37.89 | 37.89 |
| TraesCS7B01G329000.1 | Wheat | extracellular | 36.84 | 37.84 |
| TraesCS7B01G329200.1 | Wheat | extracellular | 37.11 | 37.6 |
| TraesCS7A01G430000.1 | Wheat | extracellular | 37.11 | 37.5 |
| KXG30582 | Sorghum | vacuole | 38.68 | 37.5 |
| Os02t0608801-00 | Rice | extracellular | 39.74 | 37.47 |
| TraesCS7A01G429100.2 | Wheat | extracellular | 36.84 | 37.33 |
| TraesCS1D01G250200.1 | Wheat | extracellular, vacuole | 40.0 | 37.25 |
| TraesCS7D01G421200.1 | Wheat | endoplasmic reticulum, extracellular | 36.84 | 37.14 |
| Solyc03g006240.2.1 | Tomato | nucleus | 35.79 | 36.96 |
| TraesCS7D01G421900.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 36.58 | 36.87 |
| Os06t0694200-01 | Rice | extracellular | 36.58 | 36.68 |
| TraesCS1A01G250600.1 | Wheat | endoplasmic reticulum | 38.95 | 36.45 |
| TraesCS1B01G261200.1 | Wheat | endoplasmic reticulum, mitochondrion, vacuole | 38.68 | 36.12 |
| HORVU1Hr1G061910.1 | Barley | endoplasmic reticulum, golgi, mitochondrion | 39.21 | 35.99 |
| Zm00001d007351_P001 | Maize | plasma membrane | 39.47 | 35.63 |
| Zm00001d014596_P001 | Maize | endoplasmic reticulum, vacuole | 37.63 | 35.48 |
| Solyc10g008720.2.1 | Tomato | extracellular | 35.79 | 35.05 |
| Solyc10g008710.2.1 | Tomato | extracellular | 34.47 | 34.66 |
| HORVU7Hr1G098600.2 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 36.58 | 33.57 |
| Os02t0604000-00 | Rice | extracellular | 35.79 | 33.5 |
| KXG20727 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 36.84 | 33.25 |
| Zm00001d017140_P001 | Maize | endoplasmic reticulum, extracellular | 35.53 | 33.17 |
| EES05386 | Sorghum | extracellular, vacuole | 36.58 | 33.02 |
| TraesCS7B01G329900.1 | Wheat | extracellular | 36.84 | 31.96 |
| HORVU7Hr1G098580.5 | Barley | mitochondrion | 27.11 | 25.31 |
Protein Annotations
| EnsemblPlants:Solyc01g099020.2.1 | EnsemblPlantsGene:Solyc01g099020.2 | Gene3D:3.40.50.1110 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016787 | GO:GO:0016788 | InterPro:GDSL | InterPro:IPR036514 | InterPro:SGNH_hydro_sf | InterPro:SGNH_plant_lipase_like |
| PANTHER:PTHR22835 | PANTHER:PTHR22835:SF289 | PFAM:PF00657 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF52266 |
| UniParc:UPI0002768B65 | UniProt:K4B0T9 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr1:-:89359591..89361309
Molecular Weight (calculated)
42632.1 Da
IEP (calculated)
5.426
GRAVY (calculated)
-0.060
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MALGMRVVVF HLLISLLLLQ LIKGDDDMII KLKEPKLKKC GIDRIFQFGD SLSDTGNCLR ESYCGAQTKT GKLPYGMNFY QNATGRCSDG FIILDYIAME
101: CGLPLLNPSL EENADFSHGV NFAVSGATAL SAEYLISRDI AMSFTNSSLS VQMRWMSSYF KSVCSNDCAK YLENSLFLIG EIGGDDVTYG FKQGKPIEEV
201: RRIVPDIVKN IIHSVRTVIG FGATRILVPG NFPSGCFPII LTLYMNDSST VYDEYHCAEE WNNFTISYNN LLQQSIHELN EEYPNISIIY GDYYNAYYWL
301: LRNAVALGFN KKTLQISCCG IGGEYNYTES RRCGKPGAEK ACADPSSYLS WDGSHLTQKA YGWITKWLID DILPQLNCRV
101: CGLPLLNPSL EENADFSHGV NFAVSGATAL SAEYLISRDI AMSFTNSSLS VQMRWMSSYF KSVCSNDCAK YLENSLFLIG EIGGDDVTYG FKQGKPIEEV
201: RRIVPDIVKN IIHSVRTVIG FGATRILVPG NFPSGCFPII LTLYMNDSST VYDEYHCAEE WNNFTISYNN LLQQSIHELN EEYPNISIIY GDYYNAYYWL
301: LRNAVALGFN KKTLQISCCG IGGEYNYTES RRCGKPGAEK ACADPSSYLS WDGSHLTQKA YGWITKWLID DILPQLNCRV
001: MATLFMKLVS FFLILSTFCL TTVNSEPQCH NFKSIISFGD SIADTGNLLA LSDPTNLPKV AFLPYGETFF HHPTGRFSNG RLIIDFIAEF LGFPLVPPFY
101: GSQNANFEKG VNFAVGGATA LERSFLEERG IHFPYTNVSL AVQLSSFKES LPNLCVSPSD CRDMIENSLI LMGEIGGNDY NYAFFVGKNI EEIKELVPLV
201: IETISSAITE LIGMGGKTFL VPGEFPLGCS VAYLSLYQTS NIEEYDPLTG CLKWLNKFSE YHDEQLQAEL NRLQKLYPHV NIIYADYYNT LLRLAQEPAK
301: FGFISRPLPA CCALGGPFNF TLGRKRGTQV PECCDDPSKY VSWDGVHMTE AAYRLMAEGI LKGPYAIPPF DWSCLSSEIK NTQNSLMNN
101: GSQNANFEKG VNFAVGGATA LERSFLEERG IHFPYTNVSL AVQLSSFKES LPNLCVSPSD CRDMIENSLI LMGEIGGNDY NYAFFVGKNI EEIKELVPLV
201: IETISSAITE LIGMGGKTFL VPGEFPLGCS VAYLSLYQTS NIEEYDPLTG CLKWLNKFSE YHDEQLQAEL NRLQKLYPHV NIIYADYYNT LLRLAQEPAK
301: FGFISRPLPA CCALGGPFNF TLGRKRGTQV PECCDDPSKY VSWDGVHMTE AAYRLMAEGI LKGPYAIPPF DWSCLSSEIK NTQNSLMNN
Arabidopsis Description
GDSL esterase/lipase At1g28570 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXJ1]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.