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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:
  • nucleus 1
  • plastid 1
  • extracellular 5
  • endoplasmic reticulum 3
  • vacuole 4
  • plasma membrane 3
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi, vacuole
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400034315 Potato cytosol 72.68 74.86
Solyc01g099030.2.1 Tomato extracellular 68.97 69.33
Solyc01g099010.2.1 Tomato extracellular 67.9 68.27
Solyc01g099060.1.1 Tomato extracellular 67.37 66.84
Solyc01g099040.2.1 Tomato extracellular 58.89 58.42
Solyc01g099020.2.1 Tomato nucleus 55.7 55.26
VIT_14s0060g02080.t01 Wine grape endoplasmic reticulum, vacuole 49.34 49.73
Bra009496.1-P Field mustard extracellular 43.5 44.69
CDX70269 Canola extracellular 38.46 44.21
CDY41414 Canola vacuole 38.2 43.9
GSMUA_Achr11P... Banana extracellular 43.24 43.58
TraesCS7D01G421100.1 Wheat endoplasmic reticulum, extracellular 41.91 43.41
TraesCS3B01G151300.1 Wheat extracellular, vacuole 42.44 42.9
TraesCS7A01G430000.1 Wheat extracellular 42.71 42.82
TraesCS3D01G134200.1 Wheat extracellular, plasma membrane 42.18 42.74
TraesCS3A01G308200.1 Wheat extracellular, golgi 42.18 42.74
TraesCS7D01G421200.1 Wheat endoplasmic reticulum, extracellular 42.44 42.44
TraesCS7B01G329000.1 Wheat extracellular 41.64 42.43
TraesCS7A01G428800.1 Wheat extracellular 41.64 42.43
HORVU3Hr1G024970.12 Barley endoplasmic reticulum, vacuole 42.18 42.18
TraesCS7D01G421900.1 Wheat endoplasmic reticulum, extracellular, vacuole 42.18 42.18
TraesCS7A01G429100.2 Wheat extracellular 41.64 41.87
AT5G03980.1 Thale cress vacuole 35.81 41.8
TraesCS7B01G329200.1 Wheat extracellular 41.38 41.6
Os11t0521000-01 Rice plasma membrane 40.85 41.29
EES09797 Sorghum plasma membrane 42.18 41.09
HORVU6Hr1G053960.1 Barley vacuole 42.18 40.36
Os06t0694200-01 Rice extracellular 40.32 40.11
TraesCS6B01G240600.1 Wheat vacuole 41.64 40.05
TraesCS6A01G211100.1 Wheat extracellular, plasma membrane, vacuole 41.38 39.1
Solyc02g077120.2.1 Tomato cytosol 22.02 38.97
Solyc03g006240.2.1 Tomato nucleus 37.93 38.86
TraesCS6D01G194200.1 Wheat vacuole 41.11 38.85
Solyc12g017460.1.1 Tomato extracellular 37.93 38.75
Os02t0608801-00 Rice extracellular 41.11 38.46
Zm00001d014596_P001 Maize endoplasmic reticulum, vacuole 41.11 38.46
HORVU7Hr1G098600.2 Barley endoplasmic reticulum, extracellular, plasma membrane 42.18 38.41
Solyc03g006250.2.1 Tomato extracellular 38.46 38.16
TraesCS1D01G250200.1 Wheat extracellular, vacuole 40.85 37.75
HORVU1Hr1G061910.1 Barley endoplasmic reticulum, golgi, mitochondrion 41.38 37.68
Solyc12g096620.1.1 Tomato nucleus 37.93 37.63
TraesCS7B01G329900.1 Wheat extracellular 43.24 37.21
OQU85266 Sorghum extracellular 39.26 37.09
Zm00001d007351_P001 Maize plasma membrane 41.38 37.05
TraesCS1A01G250600.1 Wheat endoplasmic reticulum 39.79 36.95
TraesCS1B01G261200.1 Wheat endoplasmic reticulum, mitochondrion, vacuole 39.52 36.61
KXG20727 Sorghum endoplasmic reticulum, extracellular, vacuole 40.85 36.58
Solyc10g008720.2.1 Tomato extracellular 37.14 36.08
KXG30582 Sorghum vacuole 36.34 34.95
Zm00001d017140_P001 Maize endoplasmic reticulum, extracellular 37.67 34.89
EES05386 Sorghum extracellular, vacuole 38.46 34.44
Os02t0604000-00 Rice extracellular 36.34 33.74
Solyc10g008710.2.1 Tomato extracellular 33.69 33.6
HORVU7Hr1G098580.5 Barley mitochondrion 31.83 29.48
Protein Annotations
EnsemblPlants:Solyc01g099050.2.1EnsemblPlantsGene:Solyc01g099050.2Gene3D:3.40.50.1110GO:GO:0003674GO:GO:0003824GO:GO:0016787
GO:GO:0016788InterPro:GDSLInterPro:IPR036514InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likePANTHER:PTHR22835
PANTHER:PTHR22835:SF289PFAM:PF00657SEG:segSignalP:SignalP-noTMSUPFAM:SSF52266UniParc:UPI0002768B68
UniProt:K4B0U2MapMan:35.1::::
Description
No Description!
Coordinates
chr1:-:89388842..89390467
Molecular Weight (calculated)
42918.8 Da
IEP (calculated)
7.224
GRAVY (calculated)
-0.156
Length
377 amino acids
Sequence
(BLAST)
001: MAFAIRVILV ISLVIIQQNS DAQELIKLQK PRLRNCRFDK IYQFGDSISD TGNCIREPLC ESHSDCRKHP YGMNFYENAT GRCSDGMLMI DFIALESGLP
101: LLNPYKDRIA NFRHGVNFAV AGCTGISAEI MEENKIFNTA FTNSSLTVQL DWMSSHFENT WNTDCRKKLK KSLVLVGEIG GNEFNYGLLQ GKSIEELRKM
201: VPIVIQTIIH GVKRVIDFGA TRIIVPGNFP IGCVPIFLTR FMTDDSNAYD EHHCLKDLNN FSIFFNNHLQ QAIDEMKKKH PNITLIYGDY YNAFMWFLQN
301: AVGFGFDKNS LLKACCGSGG GDYNYNIRRR CGFPGVEVCA NPSTYINWDG IHMTQEAYKY LAKWLIDDML PQLNCHV
Best Arabidopsis Sequence Match ( AT5G45910.1 )
(BLAST)
001: MRINMLFIVA FSFLVSVRSL PMRPTLKYES IFNFGDSLSD TGNFLLSGDV DSPNIGRLPY GQTFFNRSTG RCSDGRLIID FIAEASGLPY IPPYLQSLRT
101: NDSVDFKRGA NFAVAGATAN EFSFFKNRGL SVTLLTNKTL DIQLDWFKKL KPSLCKTKPE CEQYFRKSLF LVGEIGGNDY NYPLLAFRSF KHAMDLVPFV
201: INKIMDVTSA LIEEGAMTLI VPGNLPIGCS AALLERFNDN SGWLYDSRNQ CYMPLNNLAK LHNDKLKKGL AALRKKYPYA KIIYADYYSS AMQFFNSPSK
301: YGFTGSVLKA CCGGGDGRYN VQPNVRCGEK GSTTCEDPST YANWDGIHLT EAAYRHIATG LISGRFTMPT YN
Arabidopsis Description
GDSL esterase/lipase At5g45910 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ45]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.