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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 7
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU85266 Sorghum extracellular 92.09 90.48
Os02t0608801-00 Rice extracellular 71.94 69.98
TraesCS6B01G240600.1 Wheat vacuole 68.37 68.37
HORVU6Hr1G053960.1 Barley vacuole 68.11 67.77
TraesCS6D01G194200.1 Wheat vacuole 68.62 67.42
TraesCS6A01G211100.1 Wheat extracellular, plasma membrane, vacuole 68.37 67.17
EES05386 Sorghum extracellular, vacuole 54.59 50.83
Bra009496.1-P Field mustard extracellular 39.54 42.23
EES09797 Sorghum plasma membrane 41.58 42.12
KXG20727 Sorghum endoplasmic reticulum, extracellular, vacuole 45.15 42.04
CDX70269 Canola extracellular 34.18 40.85
CDY41414 Canola vacuole 34.18 40.85
VIT_14s0060g02080.t01 Wine grape endoplasmic reticulum, vacuole 38.78 40.64
PGSC0003DMT400063633 Potato cytosol 25.51 40.0
Solyc01g099030.2.1 Tomato extracellular 38.01 39.73
PGSC0003DMT400063639 Potato cytosol 36.48 39.5
AT5G03980.1 Thale cress vacuole 32.14 39.01
Solyc01g099020.2.1 Tomato nucleus 37.5 38.68
PGSC0003DMT400048871 Potato extracellular 35.71 37.74
EES02257 Sorghum endoplasmic reticulum 36.48 37.73
Solyc01g099040.2.1 Tomato extracellular 36.22 37.37
Solyc01g099060.1.1 Tomato extracellular 35.71 36.84
Solyc01g099010.2.1 Tomato extracellular 34.95 36.53
PGSC0003DMT400067663 Potato extracellular 34.95 36.34
Solyc01g099050.2.1 Tomato extracellular, golgi, vacuole 34.95 36.34
PGSC0003DMT400034313 Potato cytosol 28.57 35.9
EES00052 Sorghum golgi 32.91 34.86
EES02259 Sorghum plasma membrane 33.67 34.83
EES00053 Sorghum extracellular 33.42 34.66
KXG21541 Sorghum extracellular 31.38 33.61
EER87874 Sorghum extracellular, plasma membrane 33.16 33.51
EER89867 Sorghum extracellular 31.89 33.42
KXG21542 Sorghum extracellular 28.32 33.33
EES01179 Sorghum extracellular 32.91 32.99
EES17880 Sorghum golgi 32.14 32.9
EES02254 Sorghum extracellular 31.38 32.63
EES01175 Sorghum endoplasmic reticulum, golgi, vacuole 30.36 32.6
EES06644 Sorghum extracellular, plasma membrane, vacuole 30.36 32.6
EES02253 Sorghum endoplasmic reticulum, extracellular 31.63 32.55
EES01174 Sorghum vacuole 29.59 32.31
EES17878 Sorghum extracellular 29.85 32.14
OQU90350 Sorghum endoplasmic reticulum, mitochondrion 32.4 32.07
KXG19336 Sorghum extracellular, plasma membrane 29.59 32.04
KXG31572 Sorghum extracellular 31.63 31.88
EES17881 Sorghum endoplasmic reticulum 31.89 31.65
EER89868 Sorghum golgi, mitochondrion, plastid 32.14 31.58
EES04851 Sorghum extracellular 30.36 31.23
EES07937 Sorghum extracellular, golgi 29.08 30.98
EES02226 Sorghum extracellular, vacuole 32.65 30.92
EER89228 Sorghum extracellular, golgi 28.83 30.79
PGSC0003DMT400034315 Potato cytosol 28.57 30.6
EES02264 Sorghum extracellular 28.06 30.3
EES02260 Sorghum golgi, vacuole 28.32 30.25
EES16190 Sorghum extracellular 27.81 30.19
EES09220 Sorghum extracellular, golgi 28.32 30.16
OQU78788 Sorghum cytosol 27.3 30.14
KXG31571 Sorghum extracellular, plasma membrane, plastid 29.85 29.47
EES01067 Sorghum plastid 32.65 29.29
EES01172 Sorghum endoplasmic reticulum, plasma membrane, vacuole 29.34 28.82
KXG20449 Sorghum mitochondrion 29.34 28.75
EER88699 Sorghum golgi, plasma membrane 29.08 28.72
EES05213 Sorghum plasma membrane 28.32 28.53
KXG36800 Sorghum plasma membrane 29.08 26.57
OQU87242 Sorghum plasma membrane 29.59 25.78
OQU90347 Sorghum mitochondrion 31.89 24.9
PGSC0003DMT400034309 Potato cytosol, nucleus, plasma membrane 27.04 22.27
Protein Annotations
EnsemblPlants:KXG30582EnsemblPlantsGene:SORBI_3004G207600Gene3D:3.40.50.1110GO:GO:0003674GO:GO:0003824GO:GO:0016787
GO:GO:0016788InterPro:GDSLInterPro:IPR036514InterPro:SGNH_hydro_sfPANTHER:PTHR22835PANTHER:PTHR22835:SF289
PFAM:PF00657ProteinID:KXG30582ProteinID:KXG30582.1SEG:segSignalP:SignalP-noTMSUPFAM:SSF52266
UniParc:UPI0007F25421UniProt:A0A194YQW2MapMan:35.1:::
Description
hypothetical protein
Coordinates
chr4:-:55790927..55792147
Molecular Weight (calculated)
41675.8 Da
IEP (calculated)
6.702
GRAVY (calculated)
-0.023
Length
392 amino acids
Sequence
(BLAST)
001: MARILLAALV AMLLVVCPCH AARPAPEQTA KSPTVKEKAV VDGITAIYNF GDSLSDTGNL LREGATGMLQ HTMGLPYGSA IGGATGRCSD GYLMIDYLAK
101: DLGLPLLNPY LDEGADFSHG VNFAVAGATA LDAAALARRG VAVPHTNSSL GVQLQRFKDF MSANTQSPEE IREKLAHSLI MVGEIGGNDY NYAFSANKPA
201: AGGARNLYNL GRMATGVAEA MALVPDVVRS VTSAARELPS TWARRGCYMA AVNETELAAY DANGCLAALN LFAQMHNVLL QQGIRELRRS YPSATISYAD
301: YFYAYVRMLR DAGKTGFDEG ARTTACCGGG GGAYNFDMDR MCGAPGASVC ARPDERISWD GVHLTQRANS VMSDLLYHKG FASPAPVEFP RT
Best Arabidopsis Sequence Match ( AT1G28570.1 )
(BLAST)
001: MATLFMKLVS FFLILSTFCL TTVNSEPQCH NFKSIISFGD SIADTGNLLA LSDPTNLPKV AFLPYGETFF HHPTGRFSNG RLIIDFIAEF LGFPLVPPFY
101: GSQNANFEKG VNFAVGGATA LERSFLEERG IHFPYTNVSL AVQLSSFKES LPNLCVSPSD CRDMIENSLI LMGEIGGNDY NYAFFVGKNI EEIKELVPLV
201: IETISSAITE LIGMGGKTFL VPGEFPLGCS VAYLSLYQTS NIEEYDPLTG CLKWLNKFSE YHDEQLQAEL NRLQKLYPHV NIIYADYYNT LLRLAQEPAK
301: FGFISRPLPA CCALGGPFNF TLGRKRGTQV PECCDDPSKY VSWDGVHMTE AAYRLMAEGI LKGPYAIPPF DWSCLSSEIK NTQNSLMNN
Arabidopsis Description
GDSL esterase/lipase At1g28570 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXJ1]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.