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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 4
  • golgi 3
  • plasma membrane 5
  • endoplasmic reticulum 3
  • vacuole 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d044048_P002 Maize endoplasmic reticulum, extracellular, plasma membrane 88.0 92.96
Os01t0649200-01 Rice cytosol 27.56 78.98
TraesCS3D01G236100.1 Wheat plastid 71.11 75.65
EES01172 Sorghum endoplasmic reticulum, plasma membrane, vacuole 66.89 75.44
TraesCS3B01G264900.1 Wheat plasma membrane, vacuole 70.89 74.88
TraesCS3A01G234900.1 Wheat plastid 69.78 74.41
HORVU3Hr1G058440.2 Barley plasma membrane 69.56 74.35
TraesCS3B01G060100.1 Wheat cytosol 37.56 73.16
Os01t0649900-01 Rice endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole 62.0 69.75
TraesCS3D01G050700.1 Wheat extracellular 59.11 68.38
TraesCS3A01G235000.1 Wheat extracellular, vacuole 58.67 67.87
TraesCS3B01G264800.1 Wheat extracellular 59.33 67.59
HORVU3Hr1G055350.1 Barley extracellular 58.67 67.01
Os01t0649400-00 Rice mitochondrion 56.67 66.41
KXG20449 Sorghum mitochondrion 58.0 65.25
EER88699 Sorghum golgi, plasma membrane 57.33 64.99
TraesCS3D01G236000.2 Wheat mitochondrion 60.22 62.01
HORVU3Hr1G008280.1 Barley golgi 57.78 61.76
Os01t0650200-01 Rice golgi, mitochondrion, peroxisome, plastid 40.44 61.69
Solyc02g077120.2.1 Tomato cytosol 23.33 49.3
GSMUA_Achr6P35710_001 Banana mitochondrion 43.11 48.74
GSMUA_Achr8P10340_001 Banana extracellular, vacuole 40.44 47.77
GSMUA_Achr8P30010_001 Banana extracellular, vacuole 37.78 47.75
GSMUA_Achr5P21270_001 Banana extracellular, plasma membrane, vacuole 40.0 47.75
GSMUA_Achr1P24780_001 Banana endoplasmic reticulum, vacuole 42.22 46.34
KRH21306 Soybean cytosol 21.78 45.79
Bra032915.1-P Field mustard mitochondrion, plasma membrane 40.22 45.59
CDY34093 Canola mitochondrion, plasma membrane 40.22 45.59
CDY30819 Canola mitochondrion, plasma membrane 39.78 45.09
Solyc03g006250.2.1 Tomato extracellular 38.0 45.0
PGSC0003DMT400011185 Potato endoplasmic reticulum, extracellular, vacuole 38.0 44.65
AT1G28600.1 Thale cress extracellular, plasma membrane 38.67 44.27
KRH21299 Soybean mitochondrion 39.33 44.25
OQU90350 Sorghum endoplasmic reticulum, mitochondrion 38.89 44.19
KRH21309 Soybean cytosol, extracellular, golgi, mitochondrion 37.11 43.49
GSMUA_Achr8P30020_001 Banana endoplasmic reticulum, extracellular, plasma membrane, plastid 39.78 43.34
Bra032917.1-P Field mustard extracellular 37.33 43.19
CDY34089 Canola extracellular 37.33 43.19
KRH21302 Soybean extracellular 36.22 43.12
EES01175 Sorghum endoplasmic reticulum, golgi, vacuole 34.89 43.01
PGSC0003DMT400026549 Potato extracellular, vacuole 38.22 43.0
CDX94632 Canola extracellular, plasma membrane, vacuole 36.44 42.93
Bra030108.1-P Field mustard extracellular, vacuole 37.56 42.78
CDY15655 Canola extracellular 37.33 42.75
EES01174 Sorghum vacuole 34.0 42.62
AT1G28610.2 Thale cress extracellular 36.22 42.56
GSMUA_Achr8P10360_001 Banana extracellular, vacuole 34.67 42.51
CDY15658 Canola extracellular, golgi 36.22 42.23
GSMUA_Achr11P... Banana endoplasmic reticulum, plasma membrane, vacuole 35.78 42.15
Bra030106.1-P Field mustard extracellular, plasma membrane, vacuole 31.56 42.14
EES01067 Sorghum plastid 40.89 42.11
EES16190 Sorghum extracellular 33.78 42.11
KRH10992 Soybean extracellular 37.56 42.04
AT1G28590.1 Thale cress extracellular 37.56 41.94
Solyc10g008710.2.1 Tomato extracellular 35.11 41.8
CDX94634 Canola plastid 36.89 41.71
AT1G28570.1 Thale cress extracellular, plasma membrane 36.0 41.65
AT1G31550.2 Thale cress extracellular, plasma membrane 36.44 41.62
AT2G27360.1 Thale cress extracellular, vacuole 36.44 41.62
CDY30822 Canola extracellular, plasma membrane 36.89 41.4
AT1G28580.1 Thale cress extracellular, vacuole 35.78 41.28
Bra010857.1-P Field mustard extracellular, plasma membrane, vacuole 35.78 41.28
CDX90163 Canola extracellular, plasma membrane, vacuole 35.78 41.28
Solyc10g008720.2.1 Tomato extracellular 35.56 41.24
KRH10995 Soybean mitochondrion 35.78 41.18
EES02254 Sorghum extracellular 34.44 41.11
EER89868 Sorghum golgi, mitochondrion, plastid 36.44 41.1
CDY15657 Canola extracellular, plasma membrane 36.22 41.06
EES01179 Sorghum extracellular 35.56 40.92
CDX94633 Canola extracellular 36.0 40.91
EER89867 Sorghum extracellular 34.0 40.91
EES02257 Sorghum endoplasmic reticulum 34.44 40.9
CDY43309 Canola extracellular, plasma membrane, vacuole 35.33 40.77
Bra030107.1-P Field mustard extracellular, plasma membrane 36.22 40.75
CDY63998 Canola extracellular, vacuole 34.89 40.36
AT1G28650.1 Thale cress extracellular, golgi, vacuole 34.44 40.26
Bra030111.1-P Field mustard vacuole 34.67 40.1
EES06644 Sorghum extracellular, plasma membrane, vacuole 32.44 40.0
EES07937 Sorghum extracellular, golgi 32.67 39.95
KXG21542 Sorghum extracellular 29.56 39.94
EES00052 Sorghum golgi 32.67 39.73
CDY64716 Canola extracellular, plasma membrane 34.22 39.59
AT1G28670.1 Thale cress extracellular, plasma membrane, vacuole 33.78 39.58
EES17878 Sorghum extracellular 32.0 39.56
Bra010858.1-P Field mustard extracellular 34.22 39.49
EES17881 Sorghum endoplasmic reticulum 34.44 39.24
KXG19336 Sorghum extracellular, plasma membrane 31.56 39.23
OQU78788 Sorghum cytosol 30.89 39.15
GSMUA_Achr8P10350_001 Banana endoplasmic reticulum, nucleus, peroxisome 34.44 39.14
AT1G28640.1 Thale cress plasma membrane 33.78 39.07
EES02259 Sorghum plasma membrane 32.89 39.05
EES02260 Sorghum golgi, vacuole 31.78 38.96
EES00053 Sorghum extracellular 32.67 38.89
EES02253 Sorghum endoplasmic reticulum, extracellular 32.89 38.85
KXG21541 Sorghum extracellular 31.56 38.8
CDX90162 Canola extracellular 33.56 38.72
GSMUA_Achr11P... Banana extracellular 36.0 38.57
AT1G28660.1 Thale cress extracellular, plasma membrane, vacuole 32.67 38.38
CDY43308 Canola extracellular 33.78 38.1
EES09220 Sorghum extracellular, golgi 31.11 38.04
EER89228 Sorghum extracellular, golgi 30.67 37.6
KXG31572 Sorghum extracellular 32.44 37.53
EES04851 Sorghum extracellular 31.11 36.75
EER87874 Sorghum extracellular, plasma membrane 31.33 36.34
CDY63997 Canola plastid 28.0 36.21
EES02264 Sorghum extracellular 28.67 35.54
EES09797 Sorghum plasma membrane 30.44 35.4
KXG31571 Sorghum extracellular, plasma membrane, plastid 31.11 35.26
KXG36800 Sorghum plasma membrane 33.56 35.2
EES02226 Sorghum extracellular, vacuole 32.0 34.78
EES05213 Sorghum plasma membrane 30.0 34.7
EES17880 Sorghum golgi 29.11 34.2
OQU85266 Sorghum extracellular 27.56 31.08
EES05386 Sorghum extracellular, vacuole 28.22 30.17
OQU90347 Sorghum mitochondrion 33.11 29.68
KXG30582 Sorghum vacuole 25.78 29.59
KXG20727 Sorghum endoplasmic reticulum, extracellular, vacuole 27.56 29.45
Protein Annotations
Gene3D:3.40.50.1110MapMan:35.1UniProt:A0A1W0VYQ5InterPro:GDSLGO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016788InterPro:IPR036514
EnsemblPlants:OQU87242ProteinID:OQU87242ProteinID:OQU87242.1PFAM:PF00657PANTHER:PTHR22835PANTHER:PTHR22835:SF209
InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likeEnsemblPlantsGene:SORBI_3003G238700SUPFAM:SSF52266unigene:Sbi.20204SignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0009DC8F85SEG:seg:::
Description
hypothetical protein
Coordinates
chr3:+:57810457..57817731
Molecular Weight (calculated)
49401.2 Da
IEP (calculated)
7.858
GRAVY (calculated)
-0.054
Length
450 amino acids
Sequence
(BLAST)
001: MASSAPGRGG RQLILPAAAV ALMVIVGAEP AAACYPRVFS FGDSLTDTGN FRFYYGNNSG EPALRPPYGE TFFRRATGRF SNGRLVLDFI ADTMGLPFVR
101: PYLSGRRAED FACGANFAVG GATALGPDFF RSRGFDIGDG RVHLGLQMKW FHDLLELLCR SGRSGCSDMI SQSLFIVGEI GGNDYNLPLL SRVPIEKIRS
201: FTPSVVAKIS STITELIGLG AKNLVVPGNL PIGCVPKYLL IFKSDDKEDY EPETGCLRWM NEFSEYHNKL LLEELEKLRK LNPGVTIIYA DYYGAAMEIF
301: HSPERFGIEE PLVACCGGEG PYGVSLSTAC GYGDYKVCDN PDKYGSWDGF HPSEAAYKGI AMGLLRGTYT QPSIASTTSS CPQLTELGSS VEYKSRGTVL
401: HFSAVAHVIG WVLFYLLFFS YRGAFTIHRR YTKRNYRIIL GGPQTLRTSQ
Best Arabidopsis Sequence Match ( AT1G28590.1 )
(BLAST)
001: MASLDSLPAM KLVRFILSTL LVTSVNSQTQ CRNFKSIISF GDSIADTGNL LGLSDPNDLP ASAFPPYGET FFHHPTGRYS DGRLIIDFIA EFLGFPLVPP
101: FYGCQNANFK KGVNFAVAGA TALEPSFLEE RGIHSTITNV SLSVQLRSFT ESLPNLCGSP SDCRDMIENA LILMGEIGGN DYNFALFQRK PVKEVEELVP
201: FVIATISSAI TELVCMGGRT FLVPGNFPIG YSASYLTLYK TSNKEEYDPL TGCLKWLNDF SEYYNKQLQE ELNGLRKLYP HVNIIYADYY NALLRLFQEP
301: AKFGFMNRPL PACCGVGGSY NFNFSRRCGS VGVEYCDDPS QYVNYDGIHM TEAAYRLISE GLLKGPYAIP PFKWSCLSSE IMNKMSLDTQ ILDEQLLQGC
401: LKV
Arabidopsis Description
GDSL esterase/lipase At1g28590 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXT9]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.