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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular, plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES02253 Sorghum endoplasmic reticulum, extracellular 83.55 82.68
KXG31572 Sorghum extracellular 68.44 66.32
KXG31571 Sorghum extracellular, plasma membrane, plastid 52.52 49.87
EES17881 Sorghum endoplasmic reticulum 51.19 48.86
GSMUA_Achr10P... Banana extracellular, vacuole 47.75 48.65
EES02257 Sorghum endoplasmic reticulum 46.95 46.7
KXG19336 Sorghum extracellular, plasma membrane 44.03 45.86
EES17880 Sorghum golgi 45.89 45.17
EER89868 Sorghum golgi, mitochondrion, plastid 47.48 44.86
EES02260 Sorghum golgi, vacuole 43.24 44.41
EES00053 Sorghum extracellular 44.3 44.18
KXG21542 Sorghum extracellular 38.99 44.14
KXG21541 Sorghum extracellular 42.44 43.72
EES02264 Sorghum extracellular 41.91 43.53
EES06644 Sorghum extracellular, plasma membrane, vacuole 41.91 43.29
EES17878 Sorghum extracellular 41.64 43.13
EER89228 Sorghum extracellular, golgi 41.64 42.78
Solyc03g006240.2.1 Tomato nucleus 41.64 42.66
KRH10999 Soybean extracellular 42.18 42.51
EER89867 Sorghum extracellular 42.18 42.51
EES00052 Sorghum golgi 41.64 42.43
EES05213 Sorghum plasma membrane 43.24 41.9
PGSC0003DMT400011187 Potato plasma membrane 41.11 41.67
KRH21298 Soybean nucleus 42.97 41.33
AT5G45910.1 Thale cress extracellular 40.58 41.13
OQU78788 Sorghum cytosol 38.73 41.13
EES02259 Sorghum plasma membrane 41.11 40.9
EES01174 Sorghum vacuole 38.2 40.11
KRH63839 Soybean vacuole 39.52 40.05
EES02226 Sorghum extracellular, vacuole 43.77 39.86
Bra034320.1-P Field mustard extracellular 40.05 39.74
EER87874 Sorghum extracellular, plasma membrane 40.85 39.69
KRG93967 Soybean vacuole 37.4 39.28
EES01175 Sorghum endoplasmic reticulum, golgi, vacuole 37.4 38.63
EES04851 Sorghum extracellular 38.46 38.06
KRH32795 Soybean extracellular 36.34 38.06
EES16190 Sorghum extracellular 36.34 37.95
OQU90350 Sorghum endoplasmic reticulum, mitochondrion 39.79 37.88
CDY48195 Canola vacuole 40.05 37.75
EES01172 Sorghum endoplasmic reticulum, plasma membrane, vacuole 39.79 37.59
CDX77066 Canola extracellular 40.05 37.56
EES07937 Sorghum extracellular, golgi 36.34 37.23
EES09797 Sorghum plasma membrane 37.93 36.95
EES01179 Sorghum extracellular 38.2 36.83
EER88699 Sorghum golgi, plasma membrane 38.46 36.52
KRH54432 Soybean extracellular, plasma membrane, vacuole 28.38 36.27
EES09220 Sorghum extracellular, golgi 35.28 36.14
KXG20449 Sorghum mitochondrion 38.2 36.0
KXG20727 Sorghum endoplasmic reticulum, extracellular, vacuole 38.99 34.92
OQU87242 Sorghum plasma membrane 41.11 34.44
KXG36800 Sorghum plasma membrane 38.2 33.57
EES01067 Sorghum plastid 38.46 33.18
OQU85266 Sorghum extracellular 35.01 33.08
EES05386 Sorghum extracellular, vacuole 36.34 32.54
KXG30582 Sorghum vacuole 32.63 31.38
OQU90347 Sorghum mitochondrion 37.93 28.49
VIT_10s0003g01010.t01 Wine grape cytosol 44.56 22.43
Protein Annotations
Gene3D:3.40.50.1110MapMan:35.1UniProt:C5XL12EnsemblPlants:EES02254ProteinID:EES02254ProteinID:EES02254.1
InterPro:GDSLGO:GO:0003674GO:GO:0003824GO:GO:0016787GO:GO:0016788InterPro:IPR036514
PFAM:PF00657PFscan:PS51257PANTHER:PTHR22835PANTHER:PTHR22835:SF280InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_like
EnsemblPlantsGene:SORBI_3003G020400SUPFAM:SSF52266SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001A84E86RefSeq:XP_002457134.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr3:+:1770366..1771806
Molecular Weight (calculated)
40694.8 Da
IEP (calculated)
8.301
GRAVY (calculated)
0.092
Length
377 amino acids
Sequence
(BLAST)
001: MRSSIAAVAA VLLLFISCLL HGADAGGYRP KPFFTSIFSF GNSYTDTGNF VRLAAPIIPV IPFNNLPYGE TFFRRPTGRA SNGRLVLDFI ADAFGLPFVP
101: PSLDKSQSFS KGANFAVVGA TALDLSYFQE HNITSVPPSL SVQIGWFQQL KPSLCSTPKQ CDGYLGKSLF VMGEIGGNDY IYLLAANKTV AQTKSHVPTV
201: VKAIAGGVER LINLGAKRIV VPGNLPMGCT PIILTLYASH SKSDYDEYGC LDRFNDLARY HNELLRREVQ ALQKKYKPTT KIAFADYFRP VVEFLQKPDE
301: FGFNGGTALV ACCGAGGRYN YNATAACGLA GATTCVDPSR ALNWDGVHLT EKAYGAIAAA WLHGPDAEPT IVLDLAH
Best Arabidopsis Sequence Match ( AT1G28660.1 )
(BLAST)
001: MASSLKKLIS SFLLVLYSTT IIVASSESRC RRFTSIISFG DSIADTGNIL HLSDVNHLPQ TAFFPYGESF FHPPSGRASD GRLIIDFIAE FLGLPYVPPY
101: FGSQNVSFEQ GINFAVYGAT ALDRAYFVAK GIESDFTNVS LGVQLDIFKQ ILPNLCASSS RDCREMLGDS LILMGEIGGN DFFYPSSEGK SINETKLQDL
201: IIKAISSAIV DLIALGGKTF LVPGGFPAGC SAACLTQYQN ATEEDYDPLT GCIPRLNELG EHDNEQLKTE LKRLQKLYPD VNIIYADYHN SLYRFYQEPA
301: KYGFKNKPLA ACCGVGGKYN FTIGKECGYE GVSYCQNPSE YVNWDGYHLT EAAYQKMAEG ILNGPYATPA FDWSCLGSGT VDT
Arabidopsis Description
GDSL esterase/lipase At1g28660 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPE4]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.