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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU7Hr1G011810.1 Barley extracellular, plasma membrane, vacuole 78.31 72.97
TraesCS4A01G426700.1 Wheat extracellular 78.03 72.7
TraesCS7A01G062600.1 Wheat extracellular, plasma membrane, vacuole 77.75 72.44
TraesCS4A01G426300.1 Wheat extracellular 77.75 72.44
Os01t0223200-01 Rice endoplasmic reticulum, extracellular, vacuole 65.07 60.95
EES02226 Sorghum extracellular, vacuole 53.8 46.14
EES02254 Sorghum extracellular 41.13 38.73
EES00053 Sorghum extracellular 41.13 38.62
KXG31572 Sorghum extracellular 41.97 38.3
EES00052 Sorghum golgi 39.44 37.84
GSMUA_Achr10P... Banana extracellular, vacuole 39.44 37.84
EES02253 Sorghum endoplasmic reticulum, extracellular 40.0 37.27
EER89867 Sorghum extracellular 39.15 37.17
EES02260 Sorghum golgi, vacuole 38.31 37.06
EES02259 Sorghum plasma membrane 39.15 36.68
AT5G45910.1 Thale cress extracellular 38.31 36.56
EES02257 Sorghum endoplasmic reticulum 38.87 36.41
EES17881 Sorghum endoplasmic reticulum 40.28 36.2
KXG19336 Sorghum extracellular, plasma membrane 36.9 36.19
KXG21542 Sorghum extracellular 33.8 36.04
EER89868 Sorghum golgi, mitochondrion, plastid 40.0 35.59
KXG21541 Sorghum extracellular 36.62 35.52
EES17878 Sorghum extracellular 36.34 35.44
Bra034320.1-P Field mustard extracellular 37.75 35.26
KXG31571 Sorghum extracellular, plasma membrane, plastid 39.15 35.01
EES17880 Sorghum golgi 37.46 34.73
EES02264 Sorghum extracellular 35.49 34.71
EES04851 Sorghum extracellular 36.9 34.38
EER87874 Sorghum extracellular, plasma membrane 36.9 33.76
Solyc03g006240.2.1 Tomato nucleus 34.93 33.7
CDY48195 Canola vacuole 37.75 33.5
KRG93967 Soybean vacuole 33.8 33.43
EES01174 Sorghum vacuole 33.8 33.43
PGSC0003DMT400011187 Potato plasma membrane 34.93 33.33
CDX77066 Canola extracellular 37.75 33.33
KRH10999 Soybean extracellular 34.93 33.16
KXG20449 Sorghum mitochondrion 37.18 33.0
EER89228 Sorghum extracellular, golgi 34.08 32.97
EES06644 Sorghum extracellular, plasma membrane, vacuole 33.8 32.88
EES01172 Sorghum endoplasmic reticulum, plasma membrane, vacuole 36.9 32.83
KRH32795 Soybean extracellular 32.68 32.22
EES05213 Sorghum plasma membrane 35.21 32.13
KRH63839 Soybean vacuole 33.52 31.99
KRH21298 Soybean nucleus 35.21 31.89
EER88699 Sorghum golgi, plasma membrane 35.49 31.74
KRH54432 Soybean extracellular, plasma membrane, vacuole 26.2 31.53
EES01179 Sorghum extracellular 34.37 31.2
OQU90350 Sorghum endoplasmic reticulum, mitochondrion 34.65 31.06
EES09797 Sorghum plasma membrane 33.8 31.01
OQU87242 Sorghum plasma membrane 39.15 30.89
EES16190 Sorghum extracellular 31.27 30.75
EES01067 Sorghum plastid 37.75 30.66
EES01175 Sorghum endoplasmic reticulum, golgi, vacuole 30.7 29.86
EES07937 Sorghum extracellular, golgi 30.42 29.35
KXG36800 Sorghum plasma membrane 35.21 29.14
EES09220 Sorghum extracellular, golgi 29.86 28.8
OQU85266 Sorghum extracellular 31.83 28.32
KXG20727 Sorghum endoplasmic reticulum, extracellular, vacuole 32.68 27.55
EES05386 Sorghum extracellular, vacuole 32.39 27.32
KXG30582 Sorghum vacuole 30.14 27.3
OQU90347 Sorghum mitochondrion 35.49 25.1
VIT_10s0003g01010.t01 Wine grape cytosol 37.46 17.76
Protein Annotations
EnsemblPlants:OQU78788EnsemblPlantsGene:SORBI_3008G048501Gene3D:3.40.50.1110GO:GO:0003674GO:GO:0003824GO:GO:0016787
GO:GO:0016788InterPro:GDSLInterPro:IPR036514InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likePANTHER:PTHR22835
PANTHER:PTHR22835:SF272PFAM:PF00657ProteinID:OQU78788ProteinID:OQU78788.1SEG:segSUPFAM:SSF52266
UniParc:UPI000B8BB20FUniProt:A0A1Z5R4T1MapMan:35.1:::
Description
hypothetical protein
Coordinates
chr8:-:4747719..4750876
Molecular Weight (calculated)
38468.3 Da
IEP (calculated)
4.545
GRAVY (calculated)
-0.008
Length
355 amino acids
Sequence
(BLAST)
001: CCLGGDDGGA PRGRRHLGAP PSFDSIFAFG DSFTDTGNNP VVFGWYDVFD VVMRPPYGMT FFGGHPTGRN SNGRLIIDFI AQGLGLPLVP PYLSHNGSFR
101: QGANFAVGGA TGLNSSFFHI GDGSGASLFP LNTSLEVQLE WFEDLKPSLC KTDQECKDFF GRSLFFVGEF GINDYQYSFG KKSMQEIRDF VPDLIQIISM
201: GAERVIEHGA KTVVIPGMIP SGCAPPVLVT FADADASEYD AVTGELRAEH PDVAVVHTDL FNHVTEMVMS PEQFGLERDV LTACCGGSGR YHYNLSVACG
301: DDAATVCEYP SKSLFWDGVH LTEAPYHYIA KDWLNTILSS VSADARATIM AYASI
Best Arabidopsis Sequence Match ( AT1G28580.1 )
(BLAST)
001: MAYPGSPILM KLLVFIFLST FVVTNVSSET KCREFKSIIS FGDSIADTGN LLGLSDPKDL PHMAFPPYGE NFFHHPTGRF SNGRLIIDFI AEFLGLPLVP
101: PFYGSHNANF EKGVNFAVGG ATALERSFLE DRGIHFPYTN VSLGVQLNSF KESLPSICGS PSDCRDMIEN ALILMGEIGG NDYNYAFFVD KGIEEIKELM
201: PLVITTISSA ITELIGMGGR TFLVPGEFPV GCSVLYLTSH QTSNMEEYDP LTGCLKWLNK FGENHGEQLR AELNRLQKLY PHVNIIYADY YNALFHLYQE
301: PAKFGFMNRP LSACCGAGGP YNYTVGRKCG TDIVESCDDP SKYVAWDGVH MTEAAYRLMA EGILNGPYAI PPFDWSCRSS GVKNSGSSDT
Arabidopsis Description
GDSL esterase/lipase At1g28580 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXJ2]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.