Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G062600.1 | Wheat | extracellular, plasma membrane, vacuole | 95.28 | 95.28 |
| TraesCS4A01G426700.1 | Wheat | extracellular | 94.75 | 94.75 |
| HORVU7Hr1G011810.1 | Barley | extracellular, plasma membrane, vacuole | 92.91 | 92.91 |
| OQU78788 | Sorghum | cytosol | 72.44 | 77.75 |
| Os01t0223200-01 | Rice | endoplasmic reticulum, extracellular, vacuole | 64.83 | 65.17 |
| TraesCS2A01G024600.2 | Wheat | extracellular, vacuole | 57.74 | 55.42 |
| TraesCS3A01G148500.1 | Wheat | extracellular, golgi | 54.07 | 53.79 |
| TraesCS3A01G141200.1 | Wheat | extracellular | 48.56 | 50.82 |
| TraesCS5A01G287100.1 | Wheat | extracellular, golgi, vacuole | 46.72 | 50.14 |
| TraesCS7A01G348900.1 | Wheat | extracellular, golgi | 41.99 | 43.01 |
| GSMUA_Achr10P... | Banana | extracellular, vacuole | 41.73 | 42.97 |
| TraesCS3A01G141100.1 | Wheat | extracellular, golgi, plasma membrane | 40.68 | 41.22 |
| TraesCS3A01G141300.1 | Wheat | extracellular | 39.37 | 40.54 |
| AT5G45910.1 | Thale cress | extracellular | 39.11 | 40.05 |
| TraesCS2A01G135000.1 | Wheat | endoplasmic reticulum, vacuole | 39.37 | 40.0 |
| TraesCS1A01G126100.1 | Wheat | extracellular | 38.85 | 40.0 |
| TraesCS5A01G422800.1 | Wheat | extracellular | 39.9 | 39.79 |
| TraesCS3A01G141400.1 | Wheat | extracellular | 39.37 | 39.58 |
| TraesCS7A01G500400.1 | Wheat | cytosol | 18.11 | 39.43 |
| TraesCS7A01G113600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 37.27 | 39.34 |
| TraesCS2A01G135300.1 | Wheat | extracellular, vacuole | 38.58 | 39.3 |
| TraesCS1A01G321100.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 37.53 | 39.29 |
| TraesCS3A01G258100.2 | Wheat | extracellular, golgi | 39.11 | 39.21 |
| Bra034320.1-P | Field mustard | extracellular | 39.11 | 39.21 |
| TraesCS2A01G135200.1 | Wheat | vacuole | 38.06 | 38.98 |
| TraesCS3A01G535400.1 | Wheat | extracellular | 38.32 | 38.93 |
| TraesCS6A01G003000.1 | Wheat | extracellular, vacuole | 39.63 | 38.92 |
| TraesCS3A01G140800.1 | Wheat | plasma membrane | 37.01 | 38.52 |
| TraesCS7A01G500300.1 | Wheat | extracellular, golgi | 30.71 | 38.36 |
| Solyc03g006240.2.1 | Tomato | nucleus | 37.01 | 38.32 |
| TraesCS5A01G214900.1 | Wheat | extracellular | 37.53 | 38.24 |
| TraesCS3A01G140900.1 | Wheat | golgi | 37.27 | 38.17 |
| PGSC0003DMT400011187 | Potato | plasma membrane | 37.01 | 37.9 |
| TraesCS3A01G235000.1 | Wheat | extracellular, vacuole | 38.32 | 37.53 |
| TraesCS2A01G543700.1 | Wheat | vacuole | 39.37 | 37.5 |
| TraesCS7A01G500200.1 | Wheat | extracellular, plasma membrane | 35.17 | 37.33 |
| CDY48195 | Canola | vacuole | 39.11 | 37.25 |
| CDX77066 | Canola | extracellular | 39.11 | 37.06 |
| TraesCS3A01G235500.1 | Wheat | extracellular | 35.7 | 36.96 |
| TraesCS7A01G113800.1 | Wheat | extracellular, golgi, plasma membrane | 36.75 | 36.94 |
| TraesCS7A01G500000.1 | Wheat | extracellular, vacuole | 36.22 | 36.9 |
| TraesCS7A01G115300.1 | Wheat | plasma membrane | 35.7 | 36.76 |
| KRH10999 | Soybean | extracellular | 35.7 | 36.36 |
| TraesCS7A01G500600.1 | Wheat | endoplasmic reticulum, vacuole | 35.17 | 36.12 |
| TraesCS7A01G113900.1 | Wheat | golgi | 36.75 | 35.9 |
| TraesCS3A01G235100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 34.65 | 35.77 |
| KRH63839 | Soybean | vacuole | 34.65 | 35.48 |
| KRG93967 | Soybean | vacuole | 33.33 | 35.38 |
| TraesCS5A01G358900.1 | Wheat | plasma membrane | 36.48 | 35.28 |
| TraesCS3A01G057100.1 | Wheat | extracellular | 34.91 | 35.09 |
| KRH32795 | Soybean | extracellular | 33.07 | 35.0 |
| TraesCS7A01G428800.1 | Wheat | extracellular | 33.86 | 34.86 |
| TraesCS3A01G219800.2 | Wheat | plasma membrane, vacuole | 37.01 | 34.81 |
| KRH21298 | Soybean | nucleus | 35.7 | 34.69 |
| TraesCS7A01G429100.2 | Wheat | extracellular | 34.12 | 34.67 |
| KRH54432 | Soybean | extracellular, plasma membrane, vacuole | 26.77 | 34.58 |
| TraesCS7A01G430000.1 | Wheat | extracellular | 34.12 | 34.57 |
| TraesCS3A01G308200.1 | Wheat | extracellular, golgi | 33.6 | 34.41 |
| TraesCS3A01G234900.1 | Wheat | plastid | 38.06 | 34.36 |
| TraesCS7A01G500500.1 | Wheat | cytosol, mitochondrion | 21.52 | 33.33 |
| TraesCS3A01G253500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 33.33 | 33.16 |
| TraesCS6A01G211100.1 | Wheat | extracellular, plasma membrane, vacuole | 34.12 | 32.58 |
| TraesCS7A01G348600.1 | Wheat | golgi, nucleus | 38.06 | 32.29 |
| TraesCS6A01G137500.1 | Wheat | extracellular, plasma membrane, vacuole | 29.13 | 32.27 |
| TraesCS1A01G382200.1 | Wheat | plastid | 33.86 | 31.62 |
| TraesCS6A01G137600.1 | Wheat | cytosol | 17.59 | 30.59 |
| TraesCS1A01G250600.1 | Wheat | endoplasmic reticulum | 32.28 | 30.3 |
| VIT_10s0003g01010.t01 | Wine grape | cytosol | 39.63 | 20.16 |
| TraesCS3A01G235600.1 | Wheat | mitochondrion | 0.79 | 0.85 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G426300.1 | EnsemblPlantsGene:TraesCS4A01G426300 | Gene3D:3.40.50.1110 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| GO:GO:0016788 | InterPro:GDSL | InterPro:IPR036514 | InterPro:SGNH_hydro_sf | InterPro:SGNH_plant_lipase_like | PANTHER:PTHR22835 |
| PANTHER:PTHR22835:SF272 | PFAM:PF00657 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF52266 | TIGR:cd01837 |
| TMHMM:TMhelix | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr4A:+:697951818..697953734
Molecular Weight (calculated)
41298.1 Da
IEP (calculated)
5.182
GRAVY (calculated)
0.013
Length
381 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSGGRLVLA AFVAVALAIL HPSAEAASLR GGGPFDSIFA FGDSFTDTGN NPIVFGWYNV FDVVMRPPYG MTSFGGCPTG RNCNGRLIID FIAQGLGLPL
101: VPPYLSHKGS FRQGANFAVG GATALNSSFF HTGDPPGASP FPLNTSLEVQ LGWFEELKPS LCQTDQEFKD FFGRSLFFVG EFGINDYHYS YGKKSMQEIR
201: AFVPDLIQTI AMGAERVIEH GAKTLVVPGM IPSGCAPPIL VTFEDADASE YDATTGCLKE PNEIVKLHNS LLRDAVQKLR AEHPDVTIIH TDLFNHVMEM
301: VKSPEKFGIK KDDVLRVCCG GCGRYHYNLS VACGDEAAMT CEDPSTHLFW DGVHLTEAAY HHIAEDWLNT IVSSLPTTAS S
101: VPPYLSHKGS FRQGANFAVG GATALNSSFF HTGDPPGASP FPLNTSLEVQ LGWFEELKPS LCQTDQEFKD FFGRSLFFVG EFGINDYHYS YGKKSMQEIR
201: AFVPDLIQTI AMGAERVIEH GAKTLVVPGM IPSGCAPPIL VTFEDADASE YDATTGCLKE PNEIVKLHNS LLRDAVQKLR AEHPDVTIIH TDLFNHVMEM
301: VKSPEKFGIK KDDVLRVCCG GCGRYHYNLS VACGDEAAMT CEDPSTHLFW DGVHLTEAAY HHIAEDWLNT IVSSLPTTAS S
001: MAYPGSPILM KLLVFIFLST FVVTNVSSET KCREFKSIIS FGDSIADTGN LLGLSDPKDL PHMAFPPYGE NFFHHPTGRF SNGRLIIDFI AEFLGLPLVP
101: PFYGSHNANF EKGVNFAVGG ATALERSFLE DRGIHFPYTN VSLGVQLNSF KESLPSICGS PSDCRDMIEN ALILMGEIGG NDYNYAFFVD KGIEEIKELM
201: PLVITTISSA ITELIGMGGR TFLVPGEFPV GCSVLYLTSH QTSNMEEYDP LTGCLKWLNK FGENHGEQLR AELNRLQKLY PHVNIIYADY YNALFHLYQE
301: PAKFGFMNRP LSACCGAGGP YNYTVGRKCG TDIVESCDDP SKYVAWDGVH MTEAAYRLMA EGILNGPYAI PPFDWSCRSS GVKNSGSSDT
101: PFYGSHNANF EKGVNFAVGG ATALERSFLE DRGIHFPYTN VSLGVQLNSF KESLPSICGS PSDCRDMIEN ALILMGEIGG NDYNYAFFVD KGIEEIKELM
201: PLVITTISSA ITELIGMGGR TFLVPGEFPV GCSVLYLTSH QTSNMEEYDP LTGCLKWLNK FGENHGEQLR AELNRLQKLY PHVNIIYADY YNALFHLYQE
301: PAKFGFMNRP LSACCGAGGP YNYTVGRKCG TDIVESCDDP SKYVAWDGVH MTEAAYRLMA EGILNGPYAI PPFDWSCRSS GVKNSGSSDT
Arabidopsis Description
GDSL esterase/lipase At1g28580 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXJ2]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.