Factsheet for TraesCS7A01G348600.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, nucleus

Predictor Summary:

plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

golgi: 25769308
nucleus: 26228564

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

msms PMID: 26228564 doi

E Bancel, T Bonnot, M Davanture, G Branlard, M Zivy, P Martre

Blaise Pascal University, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Avenue des Landais, F-63 170 Aubière, France., CNRS, PAPPSO, UMR 0320/8120 Génétique Quantitative et Évolution - Le Moulon, F-91190 Gif-sur-Yvette, France., INRA, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, 5 chemin de Beaulieu, F-63 039 Clermont-Ferrand, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G235100.1	Wheat	extracellular, vacuole	80.18	97.56
TraesCS7D01G330100.1	Wheat	extracellular, vacuole	79.29	96.48
HORVU7Hr1G079810.1	Barley	plastid	91.09	88.53
EER89868	Sorghum	golgi, mitochondrion, plastid	72.83	81.95
Os06t0531900-01	Rice	golgi	71.05	80.76
Zm00001d046136_P001	Maize	extracellular, plasma membrane	73.72	78.62
GSMUA_Achr8P19960_001	Banana	extracellular	45.21	57.34
GSMUA_Achr4P31080_001	Banana	vacuole	44.99	56.42
TraesCS1A01G321100.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	45.21	55.77
GSMUA_Achr8P19970_001	Banana	extracellular, vacuole	43.65	54.14
TraesCS7A01G113600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	42.09	52.35
TraesCS7A01G348900.1	Wheat	extracellular, golgi	43.21	52.15
TraesCS3A01G140800.1	Wheat	plasma membrane	41.87	51.37
GSMUA_Achr8P19980_001	Banana	extracellular, plasma membrane	40.76	50.97
TraesCS3A01G141100.1	Wheat	extracellular, golgi, plasma membrane	42.54	50.8
TraesCS3A01G258100.2	Wheat	extracellular, golgi	42.98	50.79
TraesCS3A01G140900.1	Wheat	golgi	41.2	49.73
GSMUA_Achr10P...	Banana	plasma membrane	39.42	49.3
GSMUA_Achr7P14040_001	Banana	cytosol	45.43	48.57
TraesCS7A01G113800.1	Wheat	extracellular, golgi, plasma membrane	40.76	48.28
GSMUA_Achr10P...	Banana	extracellular, golgi	38.08	47.5
TraesCS7A01G115300.1	Wheat	plasma membrane	38.53	46.76
TraesCS3A01G141300.1	Wheat	extracellular	38.31	46.49
GSMUA_Achr7P14030_001	Banana	cytosol, plasma membrane	38.98	45.45
AT5G45910.1	Thale cress	extracellular	36.75	44.35
TraesCS1A01G126100.1	Wheat	extracellular	36.08	43.78
TraesCS5A01G358900.1	Wheat	plasma membrane	38.08	43.4
KRH10999	Soybean	extracellular	36.08	43.32
TraesCS1A01G382200.1	Wheat	plastid	39.2	43.14
TraesCS3A01G141400.1	Wheat	extracellular	36.3	43.01
TraesCS3A01G535400.1	Wheat	extracellular	35.86	42.93
TraesCS7A01G500400.1	Wheat	cytosol	16.7	42.86
Solyc03g006240.2.1	Tomato	nucleus	34.97	42.66
TraesCS5A01G287100.1	Wheat	extracellular, golgi, vacuole	33.63	42.54
PGSC0003DMT400011187	Potato	plasma membrane	35.19	42.47
TraesCS7A01G113900.1	Wheat	golgi	36.75	42.31
TraesCS6A01G003000.1	Wheat	extracellular, vacuole	36.53	42.27
TraesCS5A01G422800.1	Wheat	extracellular	35.41	41.62
KRH21298	Soybean	nucleus	36.3	41.58
TraesCS2A01G135300.1	Wheat	extracellular, vacuole	34.52	41.44
TraesCS3A01G235000.1	Wheat	extracellular, vacuole	35.86	41.39
KRG93967	Soybean	vacuole	32.96	41.23
TraesCS2A01G135200.1	Wheat	vacuole	34.08	41.13
TraesCS2A01G543700.1	Wheat	vacuole	36.53	41.0
TraesCS3A01G235500.1	Wheat	extracellular	33.41	40.76
KRH63839	Soybean	vacuole	33.63	40.59
Bra034320.1-P	Field mustard	extracellular	34.3	40.53
TraesCS5A01G214900.1	Wheat	extracellular	33.41	40.11
TraesCS3A01G141200.1	Wheat	extracellular	32.29	39.84
TraesCS2A01G135000.1	Wheat	endoplasmic reticulum, vacuole	33.18	39.73
GSMUA_Achr3P03520_001	Banana	endoplasmic reticulum, plasma membrane	38.31	39.27
TraesCS3A01G148500.1	Wheat	extracellular, golgi	33.18	38.9
TraesCS6A01G137600.1	Wheat	cytosol	18.93	38.81
KRH54432	Soybean	extracellular, plasma membrane, vacuole	25.39	38.64
CDX77066	Canola	extracellular	34.52	38.56
CDY48195	Canola	vacuole	34.3	38.5
KRH32795	Soybean	extracellular	30.73	38.33
TraesCS7A01G500500.1	Wheat	cytosol, mitochondrion	20.94	38.21
TraesCS4A01G426300.1	Wheat	extracellular	32.29	38.06
TraesCS7A01G062600.1	Wheat	extracellular, plasma membrane, vacuole	32.29	38.06
TraesCS4A01G426700.1	Wheat	extracellular	32.07	37.8
TraesCS2A01G024600.2	Wheat	extracellular, vacuole	33.41	37.78
TraesCS3A01G219800.2	Wheat	plasma membrane, vacuole	33.85	37.53
TraesCS3A01G057100.1	Wheat	extracellular	31.63	37.47
TraesCS7A01G500600.1	Wheat	endoplasmic reticulum, vacuole	30.73	37.2
TraesCS7A01G500200.1	Wheat	extracellular, plasma membrane	29.62	37.05
TraesCS7A01G500000.1	Wheat	extracellular, vacuole	30.73	36.9
TraesCS7A01G429100.2	Wheat	extracellular	30.51	36.53
TraesCS7A01G428800.1	Wheat	extracellular	29.84	36.22
TraesCS7A01G430000.1	Wheat	extracellular	30.29	36.17
TraesCS3A01G234900.1	Wheat	plastid	33.63	35.78
TraesCS3A01G308200.1	Wheat	extracellular, golgi	28.95	34.95
TraesCS6A01G137500.1	Wheat	extracellular, plasma membrane, vacuole	26.73	34.88
TraesCS3A01G253500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	29.4	34.46
TraesCS3A01G235100.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	28.29	34.42
TraesCS7A01G500300.1	Wheat	extracellular, golgi	23.16	34.1
TraesCS6A01G211100.1	Wheat	extracellular, plasma membrane, vacuole	29.84	33.58
TraesCS1A01G250600.1	Wheat	endoplasmic reticulum	28.06	31.03
VIT_10s0003g01010.t01	Wine grape	cytosol	36.08	21.63
TraesCS3A01G235600.1	Wheat	mitochondrion	1.11	1.42

Protein Annotations

EnsemblPlants:TraesCS7A01G348600.1	EnsemblPlantsGene:TraesCS7A01G348600	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	ncoils:Coil
PANTHER:PTHR22835	PANTHER:PTHR22835:SF285	PFAM:PF00657	SEG:seg	SUPFAM:SSF52266	TIGR:cd01837
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr7A:+:511495804..511499452

Molecular Weight (calculated)

48128.8 Da

IEP (calculated)

10.111

GRAVY (calculated)

-0.176

Length

449 amino acids

Sequence
(BLAST)

001: MPNSAARASR PPARHRPAPA AAAHTSLTSP HLTPPRSRCS ALSSYKAGAT QAKDPIFPSL SPAAHARRPP TPTPTAAAAA MEHRGLLLVL VAAACLSGGA
101: HARHAKKSYG AVFSFGDSLS DAGNLIVDGI PKSLTTARSP YGMTFFGRPT GRCSNGRVVV DFLAEHFGLP LPPASQAHGK DFKKGANFAI TGATALEYSF
201: FKAHGIDQRI WNTGSINTQI GWLQKMKPSL CKSEKECRDY FSKSLFVVGE FGGNDYNAPL FSGVAFSEVK TYVPLVAKAI ANGVEKLIEL GATDLLVPGI
301: LPIGCFPLYL TLYNSSKKSD YNARTGCLRR YNRLAFHHNR ELKQQLDALQ KKYPKTKIMY GDYFKAAMQF VVSPGKFGFS TALQACCGAG GTGAYNFNLK
401: KKCGEAGASV CSNPSAYVSW DGIHMTEAAY RMVANGWLNG PYASPPIMK

Best Arabidopsis Sequence Match ( AT5G45910.1 )
(BLAST)

001: MRINMLFIVA FSFLVSVRSL PMRPTLKYES IFNFGDSLSD TGNFLLSGDV DSPNIGRLPY GQTFFNRSTG RCSDGRLIID FIAEASGLPY IPPYLQSLRT
101: NDSVDFKRGA NFAVAGATAN EFSFFKNRGL SVTLLTNKTL DIQLDWFKKL KPSLCKTKPE CEQYFRKSLF LVGEIGGNDY NYPLLAFRSF KHAMDLVPFV
201: INKIMDVTSA LIEEGAMTLI VPGNLPIGCS AALLERFNDN SGWLYDSRNQ CYMPLNNLAK LHNDKLKKGL AALRKKYPYA KIIYADYYSS AMQFFNSPSK
301: YGFTGSVLKA CCGGGDGRYN VQPNVRCGEK GSTTCEDPST YANWDGIHLT EAAYRHIATG LISGRFTMPT YN

Arabidopsis Description

GDSL esterase/lipase At5g45910 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ45]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.