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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, golgi, plastid

Predictor Summary:
  • plastid 4
  • nucleus 1
  • mitochondrion 3
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi, mitochondrion, plastid
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:plastid
ChloroP:plastid
EpiLoc:nucleus
iPSORT:plastid
MultiLoc:mitochondrion
Plant-mPloc:extracellular
Predotar:secretory
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d046136_P001 Maize extracellular, plasma membrane 93.98 89.07
TraesCS7D01G330100.1 Wheat extracellular, vacuole 80.95 87.53
TraesCS7B01G235100.1 Wheat extracellular, vacuole 80.45 86.99
Os06t0531900-01 Rice golgi 81.95 82.78
TraesCS7A01G348600.1 Wheat golgi, nucleus 81.95 72.83
HORVU7Hr1G079810.1 Barley plastid 81.7 70.56
GSMUA_Achr8P19960_001 Banana extracellular 50.63 57.06
GSMUA_Achr4P31080_001 Banana vacuole 50.38 56.15
KXG19336 Sorghum extracellular, plasma membrane 50.13 55.25
KXG21542 Sorghum extracellular 45.61 54.65
GSMUA_Achr8P19970_001 Banana extracellular, vacuole 49.37 54.42
KXG21541 Sorghum extracellular 49.87 54.37
EES17878 Sorghum extracellular 49.12 53.85
EER89867 Sorghum extracellular 50.13 53.48
EES02260 Sorghum golgi, vacuole 47.87 52.04
EES02259 Sorghum plasma membrane 49.12 51.72
GSMUA_Achr8P19980_001 Banana extracellular, plasma membrane 46.37 51.53
EES04851 Sorghum extracellular 48.87 51.18
EER89228 Sorghum extracellular, golgi 46.87 50.95
EES00052 Sorghum golgi 47.12 50.81
GSMUA_Achr10P... Banana plasma membrane 45.61 50.7
EES06644 Sorghum extracellular, plasma membrane, vacuole 45.61 49.86
GSMUA_Achr10P... Banana extracellular, golgi 43.86 48.61
EES02257 Sorghum endoplasmic reticulum 45.36 47.76
GSMUA_Achr7P14040_001 Banana cytosol 50.13 47.62
EES02254 Sorghum extracellular 44.86 47.48
GSMUA_Achr7P14030_001 Banana cytosol, plasma membrane 45.11 46.75
EES02253 Sorghum endoplasmic reticulum, extracellular 43.86 45.93
EES00053 Sorghum extracellular 43.11 45.5
EER87874 Sorghum extracellular, plasma membrane 43.61 44.85
Solyc03g006240.2.1 Tomato nucleus 40.6 44.02
KRH10999 Soybean extracellular 41.1 43.85
PGSC0003DMT400011187 Potato plasma membrane 40.85 43.82
AT5G45910.1 Thale cress extracellular 40.85 43.82
EES17880 Sorghum golgi 41.6 43.34
EES05213 Sorghum plasma membrane 42.11 43.19
EES02264 Sorghum extracellular 38.6 42.42
KRH21298 Soybean nucleus 41.6 42.35
KXG31572 Sorghum extracellular 41.1 42.16
GSMUA_Achr3P03520_001 Banana endoplasmic reticulum, plasma membrane 45.11 41.1
EES17881 Sorghum endoplasmic reticulum 40.6 41.01
KRG93967 Soybean vacuole 36.84 40.95
KRH63839 Soybean vacuole 37.84 40.59
Bra034320.1-P Field mustard extracellular 38.6 40.53
OQU78788 Sorghum cytosol 35.59 40.0
EES01179 Sorghum extracellular 39.1 39.9
EES01172 Sorghum endoplasmic reticulum, plasma membrane, vacuole 39.35 39.35
CDX77066 Canola extracellular 39.1 38.81
CDY48195 Canola vacuole 38.6 38.5
KRH54432 Soybean extracellular, plasma membrane, vacuole 28.32 38.31
EES01174 Sorghum vacuole 34.34 38.16
KRH32795 Soybean extracellular 34.34 38.06
OQU90350 Sorghum endoplasmic reticulum, mitochondrion 37.59 37.88
EES09797 Sorghum plasma membrane 36.59 37.73
KXG31571 Sorghum extracellular, plasma membrane, plastid 37.09 37.28
EES02226 Sorghum extracellular, vacuole 38.6 37.2
EER88699 Sorghum golgi, plasma membrane 36.84 37.03
EES01175 Sorghum endoplasmic reticulum, golgi, vacuole 33.58 36.71
EES16190 Sorghum extracellular 33.08 36.57
OQU87242 Sorghum plasma membrane 41.1 36.44
KXG20449 Sorghum mitochondrion 36.09 36.0
EES01067 Sorghum plastid 38.6 35.24
KXG36800 Sorghum plasma membrane 37.84 35.2
EES07937 Sorghum extracellular, golgi 30.83 33.42
EES09220 Sorghum extracellular, golgi 30.83 33.42
OQU85266 Sorghum extracellular 32.83 32.83
KXG30582 Sorghum vacuole 31.58 32.14
KXG20727 Sorghum endoplasmic reticulum, extracellular, vacuole 33.33 31.59
OQU90347 Sorghum mitochondrion 39.6 31.47
EES05386 Sorghum extracellular, vacuole 32.08 30.4
VIT_10s0003g01010.t01 Wine grape cytosol 41.6 22.16
Protein Annotations
Gene3D:3.40.50.1110MapMan:35.1EntrezGene:8058866UniProt:C5Z3Q1ncoils:CoilEnsemblPlants:EER89868
ProteinID:EER89868ProteinID:EER89868.1InterPro:GDSLGO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016788InterPro:IPR036514PFAM:PF00657
PANTHER:PTHR22835PANTHER:PTHR22835:SF285InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likeEnsemblPlantsGene:SORBI_3010G156100SUPFAM:SSF52266
unigene:Sbi.14171TMHMM:TMhelixUniParc:UPI0001A897AARefSeq:XP_002438501.1SEG:seg:
Description
hypothetical protein
Coordinates
chr10:-:45980507..45984309
Molecular Weight (calculated)
43442.4 Da
IEP (calculated)
9.778
GRAVY (calculated)
-0.147
Length
399 amino acids
Sequence
(BLAST)
001: MRVGPGSCLL LPTTATTMAV AHAPQRRRGV LLLVLVAALV AALPATCAAA RSKSKKSYTA IFSFGDSLSD AGNLIVNGTP KALTTARPPY GMTFFRKPTG
101: RCSNGRLVVD FLAEHFGLPL PQPSQAKGKD FKKGANFAIT GATALEYSFF KAHGIDQRIW NTGSINTQIG WLQDMKPSLC KSDQDCKDYF SKSLFVVGEF
201: GGNDYNAPLF SGVKFSEIKT YVPLVTKAIA NGVEKLIELG ATDLLVPGVL PIGCFPLYLT LYNTSSKSDY NARTGCLRRY NRLAFHHNRE LKQQLDELQK
301: KYPKTKIMYG DYFKAAMQFV VYPGKFGFST ALQACCGAGG QGNYNFNLKK KCGEQGASVC SNPSSYVSWD GIHMTEAAYK KVADGWLNGP YAEPPILKS
Best Arabidopsis Sequence Match ( AT5G45910.1 )
(BLAST)
001: MRINMLFIVA FSFLVSVRSL PMRPTLKYES IFNFGDSLSD TGNFLLSGDV DSPNIGRLPY GQTFFNRSTG RCSDGRLIID FIAEASGLPY IPPYLQSLRT
101: NDSVDFKRGA NFAVAGATAN EFSFFKNRGL SVTLLTNKTL DIQLDWFKKL KPSLCKTKPE CEQYFRKSLF LVGEIGGNDY NYPLLAFRSF KHAMDLVPFV
201: INKIMDVTSA LIEEGAMTLI VPGNLPIGCS AALLERFNDN SGWLYDSRNQ CYMPLNNLAK LHNDKLKKGL AALRKKYPYA KIIYADYYSS AMQFFNSPSK
301: YGFTGSVLKA CCGGGDGRYN VQPNVRCGEK GSTTCEDPST YANWDGIHLT EAAYRHIATG LISGRFTMPT YN
Arabidopsis Description
GDSL esterase/lipase At5g45910 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ45]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.