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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 7
  • golgi 5
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:nucleus, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:extracellular, plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d044043_P001 Maize endoplasmic reticulum, plasma membrane 89.72 88.83
Zm00001d044045_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 86.97 86.97
Os01t0649200-01 Rice cytosol 30.58 77.71
TraesCS3B01G060100.1 Wheat cytosol 42.36 73.16
TraesCS3A01G235000.1 Wheat extracellular, vacuole 67.92 69.67
TraesCS3D01G050700.1 Wheat extracellular 67.67 69.41
TraesCS3B01G264800.1 Wheat extracellular 68.42 69.11
Os01t0649900-01 Rice endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole 68.92 68.75
TraesCS3D01G236100.1 Wheat plastid 72.68 68.56
HORVU3Hr1G055350.1 Barley extracellular 67.67 68.53
TraesCS3B01G264900.1 Wheat plasma membrane, vacuole 72.43 67.84
HORVU3Hr1G058440.2 Barley plasma membrane 71.43 67.7
TraesCS3A01G234900.1 Wheat plastid 71.43 67.54
OQU87242 Sorghum plasma membrane 75.44 66.89
EER88699 Sorghum golgi, plasma membrane 65.16 65.49
KXG20449 Sorghum mitochondrion 65.41 65.25
Os01t0649400-00 Rice mitochondrion 62.66 65.1
Os01t0650200-01 Rice golgi, mitochondrion, peroxisome, plastid 47.62 64.41
HORVU3Hr1G008280.1 Barley golgi 66.92 63.42
TraesCS3D01G236000.2 Wheat mitochondrion 69.42 63.39
GSMUA_Achr6P35710_001 Banana mitochondrion 48.12 48.24
GSMUA_Achr5P21270_001 Banana extracellular, plasma membrane, vacuole 45.11 47.75
GSMUA_Achr8P10340_001 Banana extracellular, vacuole 44.86 46.98
Solyc02g077120.2.1 Tomato cytosol 25.06 46.95
GSMUA_Achr1P24780_001 Banana endoplasmic reticulum, vacuole 47.62 46.34
GSMUA_Achr8P30010_001 Banana extracellular, vacuole 41.1 46.07
Solyc03g006250.2.1 Tomato extracellular 42.36 44.47
KRH21306 Soybean cytosol 23.81 44.39
PGSC0003DMT400011185 Potato endoplasmic reticulum, extracellular, vacuole 42.61 44.39
OQU90350 Sorghum endoplasmic reticulum, mitochondrion 43.61 43.94
EES01175 Sorghum endoplasmic reticulum, golgi, vacuole 39.85 43.56
EES01174 Sorghum vacuole 38.6 42.9
Bra032915.1-P Field mustard mitochondrion, plasma membrane 42.61 42.82
CDY34093 Canola mitochondrion, plasma membrane 42.61 42.82
CDY30819 Canola mitochondrion, plasma membrane 42.36 42.57
KRH21299 Soybean mitochondrion 42.61 42.5
KRH21309 Soybean cytosol, extracellular, golgi, mitochondrion 40.85 42.45
GSMUA_Achr11P... Banana endoplasmic reticulum, plasma membrane, vacuole 40.6 42.41
GSMUA_Achr8P30020_001 Banana endoplasmic reticulum, extracellular, plasma membrane, plastid 43.86 42.37
Bra010857.1-P Field mustard extracellular, plasma membrane, vacuole 41.1 42.05
CDX90163 Canola extracellular, plasma membrane, vacuole 41.1 42.05
CDY43309 Canola extracellular, plasma membrane, vacuole 41.1 42.05
Bra030108.1-P Field mustard extracellular, vacuole 41.6 42.03
CDY15655 Canola extracellular 41.35 41.98
CDX94632 Canola extracellular, plasma membrane, vacuole 40.1 41.88
KRH21302 Soybean extracellular 39.6 41.8
Solyc10g008710.2.1 Tomato extracellular 39.6 41.8
AT1G28600.1 Thale cress extracellular, plasma membrane 41.1 41.73
EES01067 Sorghum plastid 45.61 41.65
Bra030106.1-P Field mustard extracellular, plasma membrane, vacuole 35.09 41.54
PGSC0003DMT400026549 Potato extracellular, vacuole 41.6 41.5
CDX94634 Canola plastid 41.35 41.46
CDY15658 Canola extracellular, golgi 40.1 41.45
GSMUA_Achr8P10360_001 Banana extracellular, vacuole 38.1 41.42
EES16190 Sorghum extracellular 37.34 41.27
AT1G28590.1 Thale cress extracellular 41.6 41.19
EES02257 Sorghum endoplasmic reticulum 39.1 41.16
Bra032917.1-P Field mustard extracellular 40.1 41.13
CDY34089 Canola extracellular 40.1 41.13
AT1G28650.1 Thale cress extracellular, golgi, vacuole 39.6 41.04
EES01179 Sorghum extracellular 40.1 40.92
CDX94633 Canola extracellular 40.6 40.91
CDY15657 Canola extracellular, plasma membrane 40.6 40.81
KRH10995 Soybean mitochondrion 39.85 40.66
EER89867 Sorghum extracellular 38.1 40.64
KRH10992 Soybean extracellular 40.85 40.55
Bra010858.1-P Field mustard extracellular 39.6 40.51
Bra030107.1-P Field mustard extracellular, plasma membrane 40.6 40.5
AT1G28670.1 Thale cress extracellular, plasma membrane, vacuole 38.85 40.36
AT1G28570.1 Thale cress extracellular, plasma membrane 39.35 40.36
CDY63998 Canola extracellular, vacuole 39.35 40.36
Solyc10g008720.2.1 Tomato extracellular 39.1 40.21
Bra030111.1-P Field mustard vacuole 39.1 40.1
CDX90162 Canola extracellular 39.1 40.0
KXG21542 Sorghum extracellular 33.33 39.94
AT2G27360.1 Thale cress extracellular, vacuole 39.35 39.85
EES02254 Sorghum extracellular 37.59 39.79
AT1G28610.2 Thale cress extracellular 38.1 39.69
CDY30822 Canola extracellular, plasma membrane 39.85 39.65
CDY64716 Canola extracellular, plasma membrane 38.6 39.59
EES07937 Sorghum extracellular, golgi 36.34 39.4
EER89868 Sorghum golgi, mitochondrion, plastid 39.35 39.35
AT1G31550.2 Thale cress extracellular, plasma membrane 38.85 39.34
AT1G28640.1 Thale cress plasma membrane 38.35 39.33
EES00052 Sorghum golgi 36.34 39.19
AT1G28660.1 Thale cress extracellular, plasma membrane, vacuole 37.59 39.16
AT1G28580.1 Thale cress extracellular, vacuole 38.1 38.97
EES02260 Sorghum golgi, vacuole 35.84 38.96
KXG31572 Sorghum extracellular 37.84 38.82
EES06644 Sorghum extracellular, plasma membrane, vacuole 35.34 38.63
CDY43308 Canola extracellular 38.6 38.6
EES17878 Sorghum extracellular 35.09 38.46
EES04851 Sorghum extracellular 36.59 38.32
GSMUA_Achr8P10350_001 Banana endoplasmic reticulum, nucleus, peroxisome 37.84 38.13
EES02253 Sorghum endoplasmic reticulum, extracellular 36.34 38.06
EES09220 Sorghum extracellular, golgi 35.09 38.04
KXG21541 Sorghum extracellular 34.84 37.98
GSMUA_Achr11P... Banana extracellular 39.85 37.86
EES00053 Sorghum extracellular 35.84 37.83
EES02259 Sorghum plasma membrane 35.84 37.73
CDY63997 Canola plastid 32.83 37.64
KXG19336 Sorghum extracellular, plasma membrane 33.83 37.29
OQU78788 Sorghum cytosol 32.83 36.9
EER87874 Sorghum extracellular, plasma membrane 35.84 36.86
EES09797 Sorghum plasma membrane 35.59 36.69
EER89228 Sorghum extracellular, golgi 33.58 36.51
KXG36800 Sorghum plasma membrane 38.85 36.13
KXG31571 Sorghum extracellular, plasma membrane, plastid 35.09 35.26
EES17881 Sorghum endoplasmic reticulum 34.84 35.19
EES05213 Sorghum plasma membrane 34.09 34.96
EES17880 Sorghum golgi 33.33 34.73
EES02226 Sorghum extracellular, vacuole 35.34 34.06
EES02264 Sorghum extracellular 30.83 33.88
OQU85266 Sorghum extracellular 30.58 30.58
KXG20727 Sorghum endoplasmic reticulum, extracellular, vacuole 31.58 29.93
OQU90347 Sorghum mitochondrion 37.59 29.88
EES05386 Sorghum extracellular, vacuole 31.33 29.69
KXG30582 Sorghum vacuole 28.82 29.34
Protein Annotations
Gene3D:3.40.50.1110MapMan:35.1UniProt:C5XF71EnsemblPlants:EES01172ProteinID:EES01172ProteinID:EES01172.1
InterPro:GDSLGO:GO:0003674GO:GO:0003824GO:GO:0016787GO:GO:0016788InterPro:IPR036514
PFAM:PF00657PANTHER:PTHR22835PANTHER:PTHR22835:SF482InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likeEnsemblPlantsGene:SORBI_3003G238600
SUPFAM:SSF52266unigene:Sbi.8142SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001A844E0RefSeq:XP_002456052.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr3:+:57805136..57810137
Molecular Weight (calculated)
43056.6 Da
IEP (calculated)
4.649
GRAVY (calculated)
0.030
Length
399 amino acids
Sequence
(BLAST)
001: MPSSFPARGG RGLLLPAAVV VLVLLDAVAP AAGCYPRVFS FGDSLADTGN CLFVYGNNSG QAGLRPPYGE TFFHRATGRA SNGRLVVDFI ADALGLPFVR
101: PYLSGGSAED FACGANFAVG GATALSPEEI RARGFDNMGN QVGLDMEMEW FRDLLHLLCP GNLAGCSDMM NQSLFLVGEI GGNDYNFPLL SGVPLEKIRT
201: MTPSVVAKIS STISELIQLG AKTLMVPGNL PIGCVPDYLM IFKSDKEEDY EPQTGCLRWM NEFSQYHNKL LVEELKKLRK LHPGVTIIYA DYYGAAMEIF
301: LSPEQYGIEH PLVACCGGEG PYGVSPTITC GFGEYKLCDN PEKYGSWDGF HPSESAYRAI ATGLLLGSYT RPSIASTTTS CPQLMELGSS AEYKPLYDL
Best Arabidopsis Sequence Match ( AT1G28600.1 )
(BLAST)
001: MASLDSLVIF LFSTLFVTIV SSETPCPNFK SIISFGDSIA DTGNLVGLSD RNQLPVTAFP PYGETFFHHP TGRSCDGRII MDFIAEFVGL PYVPPYFGSK
101: NRNFDKGVNF AVAGATALKS SFLKKRGIQP HTNVSLGVQL KSFKKSLPNL CGSPSDCRDM IGNALILMGE IGGNDYNFPF FNRKPVKEVE ELVPFVIASI
201: SSTITELIGM GGKTFLVPGE FPIGCSVVYL TLYKTSNKDE YDPSTGCLKW LNKFGEYHSE KLKVELNRLR KLYPHVNIIY ADYYNSLLRI FKEPAKFGFM
301: ERPFPACCGI GGPYNFNFTR KCGSVGVKSC KDPSKYVGWD GVHMTEAAYK WIADGILNGP YANPPFDRSC LRSEIKKESL YNQSTLTQAC VKL
Arabidopsis Description
GDSL esterase/lipase At1g28600 [Source:UniProtKB/Swiss-Prot;Acc:Q94F40]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.