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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 2
  • extracellular 7
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, peroxisome, secretory
BaCelLo:nucleus
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d037025_P001 Maize mitochondrion 90.91 87.18
Os06t0531600-01 Rice mitochondrion 85.56 85.33
TraesCS7A01G348900.1 Wheat extracellular, golgi 83.16 83.6
TraesCS7D01G329700.1 Wheat extracellular, golgi, mitochondrion 83.16 83.38
TraesCS7B01G233800.1 Wheat extracellular, golgi 82.89 83.11
EES04851 Sorghum extracellular 71.93 70.6
EES02259 Sorghum plasma membrane 65.78 64.91
HORVU7Hr1G079720.2 Barley plastid 84.76 62.65
EES00052 Sorghum golgi 61.23 61.89
GSMUA_Achr8P19960_001 Banana extracellular 49.73 52.54
GSMUA_Achr10P... Banana plasma membrane 50.27 52.37
GSMUA_Achr8P19980_001 Banana extracellular, plasma membrane 49.73 51.81
GSMUA_Achr4P31080_001 Banana vacuole 49.2 51.4
GSMUA_Achr8P19970_001 Banana extracellular, vacuole 49.73 51.38
EER89868 Sorghum golgi, mitochondrion, plastid 53.48 50.13
EES17878 Sorghum extracellular 47.86 49.18
KXG21541 Sorghum extracellular 47.86 48.91
EES02260 Sorghum golgi, vacuole 47.59 48.5
GSMUA_Achr10P... Banana extracellular, golgi 46.52 48.33
KXG19336 Sorghum extracellular, plasma membrane 46.26 47.79
EES06644 Sorghum extracellular, plasma membrane, vacuole 46.52 47.67
KXG21542 Sorghum extracellular 41.98 47.15
GSMUA_Achr7P14030_001 Banana cytosol, plasma membrane 48.4 47.01
EER89228 Sorghum extracellular, golgi 45.19 46.05
EER87874 Sorghum extracellular, plasma membrane 47.59 45.88
EES00053 Sorghum extracellular 44.92 44.44
KRH10999 Soybean extracellular 43.32 43.32
EES02257 Sorghum endoplasmic reticulum 43.58 43.01
EES02254 Sorghum extracellular 42.51 42.18
EES17880 Sorghum golgi 43.05 42.04
AT5G45910.1 Thale cress extracellular 41.44 41.67
PGSC0003DMT400011187 Potato plasma membrane 41.44 41.67
Solyc03g006240.2.1 Tomato nucleus 40.91 41.58
KRH21298 Soybean nucleus 43.32 41.33
EES02253 Sorghum endoplasmic reticulum, extracellular 41.98 41.21
GSMUA_Achr7P14040_001 Banana cytosol 46.26 41.19
KXG31572 Sorghum extracellular 41.98 40.36
EES05213 Sorghum plasma membrane 41.71 40.1
EES02264 Sorghum extracellular 38.77 39.94
Bra034320.1-P Field mustard extracellular 40.37 39.74
GSMUA_Achr3P03520_001 Banana endoplasmic reticulum, plasma membrane 46.26 39.5
OQU78788 Sorghum cytosol 37.17 39.15
EES17881 Sorghum endoplasmic reticulum 40.91 38.73
KRG93967 Soybean vacuole 37.17 38.72
KRH63839 Soybean vacuole 38.24 38.44
EES01172 Sorghum endoplasmic reticulum, plasma membrane, vacuole 40.64 38.1
CDX77066 Canola extracellular 40.91 38.06
CDY48195 Canola vacuole 40.37 37.75
EER88699 Sorghum golgi, plasma membrane 39.84 37.53
KRH32795 Soybean extracellular 36.1 37.5
EES02226 Sorghum extracellular, vacuole 40.64 36.72
KXG20449 Sorghum mitochondrion 38.77 36.25
KRH54432 Soybean extracellular, plasma membrane, vacuole 28.34 35.93
EES01067 Sorghum plastid 41.71 35.7
EES01179 Sorghum extracellular 37.17 35.55
KXG31571 Sorghum extracellular, plasma membrane, plastid 37.7 35.52
EES01174 Sorghum vacuole 33.69 35.1
EES01175 Sorghum endoplasmic reticulum, golgi, vacuole 34.22 35.07
EES16190 Sorghum extracellular 33.42 34.63
EES09797 Sorghum plasma membrane 35.83 34.63
OQU90350 Sorghum endoplasmic reticulum, mitochondrion 36.1 34.09
OQU87242 Sorghum plasma membrane 40.91 34.0
EES07937 Sorghum extracellular, golgi 31.82 32.34
OQU85266 Sorghum extracellular 34.49 32.33
KXG20727 Sorghum endoplasmic reticulum, extracellular, vacuole 36.36 32.3
KXG30582 Sorghum vacuole 33.42 31.89
EES09220 Sorghum extracellular, golgi 31.28 31.79
KXG36800 Sorghum plasma membrane 36.36 31.7
EES05386 Sorghum extracellular, vacuole 34.22 30.4
OQU90347 Sorghum mitochondrion 38.77 28.88
VIT_10s0003g01010.t01 Wine grape cytosol 42.78 21.36
Protein Annotations
Gene3D:3.40.50.1110MapMan:35.1EntrezGene:8072645UniProt:C5Z3Q0EnsemblPlants:EER89867ProteinID:EER89867
ProteinID:EER89867.1InterPro:GDSLGO:GO:0003674GO:GO:0003824GO:GO:0016787GO:GO:0016788
InterPro:IPR036514PFAM:PF00657PANTHER:PTHR22835PANTHER:PTHR22835:SF233InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_like
EnsemblPlantsGene:SORBI_3010G156000SUPFAM:SSF52266unigene:Sbi.20940SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001A897A9
RefSeq:XP_002438500.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr10:-:45969444..45974039
Molecular Weight (calculated)
40695.7 Da
IEP (calculated)
8.334
GRAVY (calculated)
-0.124
Length
374 amino acids
Sequence
(BLAST)
001: MPGDGGATGR ATWVCAVLAA FPFLAAAAAG RYHAVFNFGD SLVDAGNLVT EGIPDYLATA RPPYGQTYFG YPTGRCSDGR LVVDFIAQEF GLPLLPPSKA
101: KNASFAQGAN FAITGATALD TDFFQKRGLG KTVWNSGSLF TQIQWLRDLK PSLCSSAQEC KEFFAKCLFI VGEFGGNDYN APLFAGKDLK EAYKLMPHVI
201: QGISDGVEQL VTEGAKDLIV PGVMPSGCFP VYLTMYTDPK EGHGSRTGCL KRFNTFSWVH NAMLKRALEK LREKHPGVRI IYGDYFTPII QFILQPKKFG
301: FYKQPPRACC GAPGRGPYNF NLTAKCGEPG ASACADPTTH WSWDGIHLTE AAYRQIARGW LHGPFGDQPI VQSS
Best Arabidopsis Sequence Match ( AT5G45910.1 )
(BLAST)
001: MRINMLFIVA FSFLVSVRSL PMRPTLKYES IFNFGDSLSD TGNFLLSGDV DSPNIGRLPY GQTFFNRSTG RCSDGRLIID FIAEASGLPY IPPYLQSLRT
101: NDSVDFKRGA NFAVAGATAN EFSFFKNRGL SVTLLTNKTL DIQLDWFKKL KPSLCKTKPE CEQYFRKSLF LVGEIGGNDY NYPLLAFRSF KHAMDLVPFV
201: INKIMDVTSA LIEEGAMTLI VPGNLPIGCS AALLERFNDN SGWLYDSRNQ CYMPLNNLAK LHNDKLKKGL AALRKKYPYA KIIYADYYSS AMQFFNSPSK
301: YGFTGSVLKA CCGGGDGRYN VQPNVRCGEK GSTTCEDPST YANWDGIHLT EAAYRHIATG LISGRFTMPT YN
Arabidopsis Description
GDSL esterase/lipase At5g45910 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ45]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.