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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 5
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, vacuole
Any Predictor:nucleus, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d016031_P002 Maize endoplasmic reticulum, extracellular, vacuole 89.86 85.64
EER89228 Sorghum extracellular, golgi 78.36 77.93
TraesCS7B01G013200.1 Wheat cytosol, plastid 54.79 77.52
TraesCS7D01G111800.1 Wheat extracellular, golgi 75.89 75.27
TraesCS7A01G115300.1 Wheat plasma membrane 75.34 74.32
TraesCS1D01G390000.1 Wheat plastid 52.6 73.28
TraesCSU01G168000.1 Wheat extracellular, golgi, vacuole 72.88 71.89
TraesCSU01G158200.1 Wheat extracellular, golgi, vacuole 72.88 71.89
TraesCS1B01G407500.1 Wheat vacuole 73.42 71.66
TraesCS1D01G389900.1 Wheat endoplasmic reticulum, extracellular, golgi 73.7 71.54
TraesCS1B01G407300.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 73.15 71.39
TraesCS1A01G382200.1 Wheat plastid 73.15 65.44
KXG19336 Sorghum extracellular, plasma membrane 63.01 63.54
HORVU1Hr1G084390.7 Barley plastid 72.05 61.88
KXG21541 Sorghum extracellular 59.73 59.56
EES17878 Sorghum extracellular 58.08 58.24
EES02260 Sorghum golgi, vacuole 58.08 57.77
KXG21542 Sorghum extracellular 52.05 57.06
EER87874 Sorghum extracellular, plasma membrane 53.42 50.26
GSMUA_Achr4P31080_001 Banana vacuole 47.67 48.6
GSMUA_Achr8P19960_001 Banana extracellular 47.12 48.59
EES05213 Sorghum plasma membrane 50.68 47.56
GSMUA_Achr10P... Banana plasma membrane 46.03 46.8
EER89867 Sorghum extracellular 47.67 46.52
GSMUA_Achr8P19970_001 Banana extracellular, vacuole 45.48 45.86
EER89868 Sorghum golgi, mitochondrion, plastid 49.86 45.61
GSMUA_Achr10P... Banana extracellular, golgi 44.66 45.28
EES00052 Sorghum golgi 45.75 45.14
GSMUA_Achr8P19980_001 Banana extracellular, plasma membrane 44.38 45.13
EES02259 Sorghum plasma membrane 46.58 44.85
EES04851 Sorghum extracellular 46.3 44.36
EES02257 Sorghum endoplasmic reticulum 45.48 43.8
GSMUA_Achr7P14030_001 Banana cytosol, plasma membrane 45.75 43.38
EES02254 Sorghum extracellular 43.29 41.91
EES00053 Sorghum extracellular 43.01 41.53
EES02253 Sorghum endoplasmic reticulum, extracellular 43.29 41.47
KXG31572 Sorghum extracellular 43.84 41.13
KRH10999 Soybean extracellular 41.37 40.37
GSMUA_Achr7P14040_001 Banana cytosol 46.03 40.0
Solyc03g006240.2.1 Tomato nucleus 39.73 39.4
EES02264 Sorghum extracellular 39.18 39.39
PGSC0003DMT400011187 Potato plasma membrane 40.0 39.25
EES17881 Sorghum endoplasmic reticulum 41.92 38.73
EES17880 Sorghum golgi 40.55 38.64
KXG31571 Sorghum extracellular, plasma membrane, plastid 41.64 38.29
KRG93967 Soybean vacuole 37.53 38.16
EES01174 Sorghum vacuole 36.99 37.6
KRH21298 Soybean nucleus 40.27 37.5
EES01175 Sorghum endoplasmic reticulum, golgi, vacuole 37.26 37.26
KRH63839 Soybean vacuole 37.81 37.1
AT5G45910.1 Thale cress extracellular 37.26 36.56
Bra034320.1-P Field mustard extracellular 37.81 36.32
GSMUA_Achr3P03520_001 Banana endoplasmic reticulum, plasma membrane 43.29 36.07
KRH54432 Soybean extracellular, plasma membrane, vacuole 29.04 35.93
EES01172 Sorghum endoplasmic reticulum, plasma membrane, vacuole 38.63 35.34
KRH32795 Soybean extracellular 34.79 35.28
EER88699 Sorghum golgi, plasma membrane 38.36 35.26
OQU90350 Sorghum endoplasmic reticulum, mitochondrion 38.08 35.1
EES02226 Sorghum extracellular, vacuole 39.73 35.02
EES09797 Sorghum plasma membrane 36.99 34.88
EES01179 Sorghum extracellular 36.99 34.53
CDY48195 Canola vacuole 37.81 34.5
KXG20449 Sorghum mitochondrion 37.81 34.5
CDX77066 Canola extracellular 37.81 34.33
OQU78788 Sorghum cytosol 32.88 33.8
OQU87242 Sorghum plasma membrane 40.0 32.44
EES16190 Sorghum extracellular 32.05 32.41
EES01067 Sorghum plastid 38.36 32.04
OQU85266 Sorghum extracellular 33.7 30.83
KXG20727 Sorghum endoplasmic reticulum, extracellular, vacuole 35.34 30.64
EES09220 Sorghum extracellular, golgi 30.68 30.43
KXG30582 Sorghum vacuole 32.6 30.36
EES07937 Sorghum extracellular, golgi 30.41 30.16
EES05386 Sorghum extracellular, vacuole 34.25 29.69
KXG36800 Sorghum plasma membrane 33.97 28.9
OQU90347 Sorghum mitochondrion 35.62 25.9
VIT_10s0003g01010.t01 Wine grape cytosol 41.1 20.03
Protein Annotations
Gene3D:3.40.50.1110MapMan:35.1EntrezGene:8059085UniProt:C5XZN4EnsemblPlants:EES06644ProteinID:EES06644
ProteinID:EES06644.1InterPro:GDSLGO:GO:0003674GO:GO:0003824GO:GO:0016787GO:GO:0016788
InterPro:IPR036514PFAM:PF00657PANTHER:PTHR22835PANTHER:PTHR22835:SF237InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_like
EnsemblPlantsGene:SORBI_3004G121200SUPFAM:SSF52266unigene:Sbi.14605SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001A85F24
RefSeq:XP_002453668.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr4:-:13274663..13278061
Molecular Weight (calculated)
39703.1 Da
IEP (calculated)
7.768
GRAVY (calculated)
-0.041
Length
365 amino acids
Sequence
(BLAST)
001: MASAVILTLM LCAAASWVVA AAAAQNYSAI FNFGDSITDT GNLCTNGRPS QITFTQPPYG ETYFGTPTCR CSDGRVVVDF LSTQFGLPFL PPSKSSSADF
101: KQGANMAITG ATAMDAPFFR SLGLSDKIWN NGPISFQLQW FQQIATAVCG QSCKSYLANS LFVFGEFGGN DYNAMIFGGY TIEQARKYTP KIVNTISRGI
201: DKLIGLGATD IVVPGVLPIG CFPIYLTIYQ SSNSSDYDDL GCLKSFNDLS TYHNTLLQKR VDIIQSRHRK TARIMYADFY SAVYDMVRNP QTYGFSSVFE
301: TCCGSGGGKY NYQNSARCGM SGASACANPA THLSWDGIHL TEAAYKQITD GWLKGPYCRP PILHN
Best Arabidopsis Sequence Match ( AT1G28580.1 )
(BLAST)
001: MAYPGSPILM KLLVFIFLST FVVTNVSSET KCREFKSIIS FGDSIADTGN LLGLSDPKDL PHMAFPPYGE NFFHHPTGRF SNGRLIIDFI AEFLGLPLVP
101: PFYGSHNANF EKGVNFAVGG ATALERSFLE DRGIHFPYTN VSLGVQLNSF KESLPSICGS PSDCRDMIEN ALILMGEIGG NDYNYAFFVD KGIEEIKELM
201: PLVITTISSA ITELIGMGGR TFLVPGEFPV GCSVLYLTSH QTSNMEEYDP LTGCLKWLNK FGENHGEQLR AELNRLQKLY PHVNIIYADY YNALFHLYQE
301: PAKFGFMNRP LSACCGAGGP YNYTVGRKCG TDIVESCDDP SKYVAWDGVH MTEAAYRLMA EGILNGPYAI PPFDWSCRSS GVKNSGSSDT
Arabidopsis Description
GDSL esterase/lipase At1g28580 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXJ2]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.