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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular, plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d039326_P001 Maize extracellular, plastid, vacuole 81.4 86.41
TraesCS3B01G174900.1 Wheat extracellular, golgi 53.14 58.2
TraesCS3B01G175000.1 Wheat extracellular, golgi 52.9 57.94
TraesCS3B01G175200.1 Wheat extracellular, golgi 51.93 56.43
TraesCS3B01G175100.1 Wheat extracellular, golgi 51.93 56.43
TraesCS3A01G148500.1 Wheat extracellular, golgi 51.69 55.87
TraesCS3D01G156000.1 Wheat extracellular, golgi, vacuole 51.69 55.73
OQU78788 Sorghum cytosol 46.14 53.8
HORVU3Hr1G030080.3 Barley golgi 50.97 52.62
GSMUA_Achr10P... Banana extracellular, vacuole 40.82 45.68
EES00053 Sorghum extracellular 40.58 44.44
KXG31572 Sorghum extracellular 41.3 43.96
EES02254 Sorghum extracellular 39.86 43.77
EES00052 Sorghum golgi 38.41 42.97
EES02253 Sorghum endoplasmic reticulum, extracellular 39.37 42.78
EES17880 Sorghum golgi 39.13 42.3
KXG19336 Sorghum extracellular, plasma membrane 36.72 41.99
EES02260 Sorghum golgi, vacuole 37.2 41.96
KXG21541 Sorghum extracellular 36.96 41.8
EES17878 Sorghum extracellular 36.47 41.48
EES02259 Sorghum plasma membrane 37.92 41.42
EES17881 Sorghum endoplasmic reticulum 39.37 41.27
EES02264 Sorghum extracellular 35.99 41.05
KXG21542 Sorghum extracellular 32.85 40.84
KXG31571 Sorghum extracellular, plasma membrane, plastid 39.13 40.81
EER89867 Sorghum extracellular 36.72 40.64
EES02257 Sorghum endoplasmic reticulum 37.2 40.63
AT5G45910.1 Thale cress extracellular 35.75 39.78
Bra034320.1-P Field mustard extracellular 36.47 39.74
EES06644 Sorghum extracellular, plasma membrane, vacuole 35.02 39.73
PGSC0003DMT400011187 Potato plasma membrane 35.51 39.52
Solyc03g006240.2.1 Tomato nucleus 34.78 39.13
EES04851 Sorghum extracellular 35.99 39.11
EER89228 Sorghum extracellular, golgi 34.54 38.96
EER87874 Sorghum extracellular, plasma membrane 36.47 38.92
KRH10999 Soybean extracellular 35.02 38.77
EER89868 Sorghum golgi, mitochondrion, plastid 37.2 38.6
CDX77066 Canola extracellular 36.96 38.06
CDY48195 Canola vacuole 36.47 37.75
KRH21298 Soybean nucleus 35.51 37.5
EES01179 Sorghum extracellular 34.78 36.83
EES05213 Sorghum plasma membrane 34.3 36.5
EES01174 Sorghum vacuole 31.16 35.93
EES01172 Sorghum endoplasmic reticulum, plasma membrane, vacuole 34.06 35.34
EER88699 Sorghum golgi, plasma membrane 33.82 35.26
KXG20449 Sorghum mitochondrion 34.06 35.25
KRH63839 Soybean vacuole 31.4 34.95
KRH32795 Soybean extracellular 30.19 34.72
OQU90350 Sorghum endoplasmic reticulum, mitochondrion 33.09 34.6
KXG36800 Sorghum plasma membrane 35.51 34.27
EES09797 Sorghum plasma membrane 31.64 33.85
OQU85266 Sorghum extracellular 32.61 33.83
KRG93967 Soybean vacuole 28.99 33.43
EES01175 Sorghum endoplasmic reticulum, golgi, vacuole 28.99 32.88
KXG30582 Sorghum vacuole 30.92 32.65
EES16190 Sorghum extracellular 28.02 32.13
OQU87242 Sorghum plasma membrane 34.78 32.0
KRH54432 Soybean extracellular, plasma membrane, vacuole 22.71 31.86
KXG20727 Sorghum endoplasmic reticulum, extracellular, vacuole 32.37 31.83
EES01067 Sorghum plastid 33.57 31.81
EES09220 Sorghum extracellular, golgi 28.26 31.79
EES07937 Sorghum extracellular, golgi 28.02 31.52
EES05386 Sorghum extracellular, vacuole 31.4 30.88
OQU90347 Sorghum mitochondrion 36.47 30.08
VIT_10s0003g01010.t01 Wine grape cytosol 36.72 20.29
Protein Annotations
Gene3D:3.40.50.1110MapMan:35.1EntrezGene:8079481UniProt:C5XKC3ncoils:CoilEnsemblPlants:EES02226
ProteinID:EES02226ProteinID:EES02226.1InterPro:GDSLGO:GO:0003674GO:GO:0003824GO:GO:0016787
GO:GO:0016788InterPro:IPR036514PFAM:PF00657PANTHER:PTHR22835PANTHER:PTHR22835:SF272InterPro:SGNH_hydro_sf
InterPro:SGNH_plant_lipase_likeEnsemblPlantsGene:SORBI_3003G013100SUPFAM:SSF52266unigene:Sbi.8931SignalP:SignalP-noTMUniParc:UPI0001A84E09
RefSeq:XP_002457106.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr3:-:1193987..1196243
Molecular Weight (calculated)
44093.0 Da
IEP (calculated)
8.356
GRAVY (calculated)
0.146
Length
414 amino acids
Sequence
(BLAST)
001: MRCKQLLPPC AVWQLLVVLV LSSSSAAAAA APVPASSTTL RVQQRYDSIF SLGDSYADTG NGPVVFGWHA IASPVMRPPY GSTFFGHPTG RNCDGRLVID
101: FLAESLGLPL VPPFLRHGAT SFRRGANFAV GGATALDASF FHRWDPPGGG SVFPLNVSLA VQLQWFQSLK PSLCATPKDC SQLLGRSLFF VGAFGANDYL
201: LAMAAMRLEQ VRSLVPAVVR TISMAVERLI VEHGATTVVV PGVIPVGCAP PVLATFGDPD DPASYDPRTG CLRAINEVAA HLNALLQDAL RELRSRHRHR
301: ISAVVYADFF GPVIDMVTSP AKFGFDEDVL TLCCGGPGRF NYNRHVFCGE PGANECKDPS ARLFWDGVHL TEAAYRYVAA GWLSAITSPP PGRSGGGGGG
401: ATLPTGTGRR RLQL
Best Arabidopsis Sequence Match ( AT1G28580.1 )
(BLAST)
001: MAYPGSPILM KLLVFIFLST FVVTNVSSET KCREFKSIIS FGDSIADTGN LLGLSDPKDL PHMAFPPYGE NFFHHPTGRF SNGRLIIDFI AEFLGLPLVP
101: PFYGSHNANF EKGVNFAVGG ATALERSFLE DRGIHFPYTN VSLGVQLNSF KESLPSICGS PSDCRDMIEN ALILMGEIGG NDYNYAFFVD KGIEEIKELM
201: PLVITTISSA ITELIGMGGR TFLVPGEFPV GCSVLYLTSH QTSNMEEYDP LTGCLKWLNK FGENHGEQLR AELNRLQKLY PHVNIIYADY YNALFHLYQE
301: PAKFGFMNRP LSACCGAGGP YNYTVGRKCG TDIVESCDDP SKYVAWDGVH MTEAAYRLMA EGILNGPYAI PPFDWSCRSS GVKNSGSSDT
Arabidopsis Description
GDSL esterase/lipase At1g28580 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXJ2]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.