Factsheet for PGSC0003DMT400063633

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400034315	Potato	cytosol	78.0	53.28
PGSC0003DMT400048871	Potato	extracellular	74.8	50.4
PGSC0003DMT400034313	Potato	cytosol	62.0	49.68
PGSC0003DMT400063639	Potato	cytosol	70.4	48.62
PGSC0003DMT400067663	Potato	extracellular	72.4	48.01
VIT_14s0060g02080.t01	Wine grape	endoplasmic reticulum, vacuole	56.4	37.7
PGSC0003DMT400034309	Potato	cytosol, nucleus, plasma membrane	70.0	36.76
GSMUA_Achr11P...	Banana	extracellular	47.6	31.82
TraesCS3D01G134200.1	Wheat	extracellular, plasma membrane	46.8	31.45
TraesCS3A01G308200.1	Wheat	extracellular, golgi	46.8	31.45
TraesCS3B01G151300.1	Wheat	extracellular, vacuole	46.8	31.37
Os11t0521000-01	Rice	plasma membrane	46.0	30.83
Bra009496.1-P	Field mustard	extracellular	45.2	30.79
HORVU3Hr1G024970.12	Barley	endoplasmic reticulum, vacuole	46.4	30.77
TraesCS7D01G421100.1	Wheat	endoplasmic reticulum, extracellular	43.2	29.67
TraesCS7D01G421200.1	Wheat	endoplasmic reticulum, extracellular	44.4	29.44
TraesCS7A01G430000.1	Wheat	extracellular	43.6	28.99
EES09797	Sorghum	plasma membrane	44.8	28.94
TraesCS7B01G329000.1	Wheat	extracellular	42.8	28.92
TraesCS7A01G429100.2	Wheat	extracellular	43.2	28.8
TraesCS7D01G421900.1	Wheat	endoplasmic reticulum, extracellular, vacuole	43.2	28.65
TraesCS7B01G329200.1	Wheat	extracellular	42.8	28.53
PGSC0003DMT400011187	Potato	plasma membrane	42.4	28.49
TraesCS7A01G428800.1	Wheat	extracellular	42.0	28.38
CDY41414	Canola	vacuole	37.2	28.35
CDX70269	Canola	extracellular	37.2	28.35
TraesCS6B01G240600.1	Wheat	vacuole	44.4	28.32
TraesCS1D01G250200.1	Wheat	extracellular, vacuole	46.0	28.19
HORVU6Hr1G053960.1	Barley	vacuole	44.4	28.17
Os06t0694200-01	Rice	extracellular	42.4	27.97
PGSC0003DMT400016545	Potato	plastid	36.0	27.86
TraesCS6A01G211100.1	Wheat	extracellular, plasma membrane, vacuole	44.0	27.57
AT5G03980.1	Thale cress	vacuole	35.6	27.55
HORVU1Hr1G061910.1	Barley	endoplasmic reticulum, golgi, mitochondrion	45.6	27.54
TraesCS1B01G261200.1	Wheat	endoplasmic reticulum, mitochondrion, vacuole	44.8	27.52
TraesCS6D01G194200.1	Wheat	vacuole	43.6	27.32
OQU85266	Sorghum	extracellular	43.2	27.07
TraesCS1A01G250600.1	Wheat	endoplasmic reticulum	43.6	26.85
PGSC0003DMT400016546	Potato	endoplasmic reticulum, vacuole	39.6	26.83
Os02t0608801-00	Rice	extracellular	43.2	26.8
Zm00001d017140_P001	Maize	endoplasmic reticulum, extracellular	43.6	26.78
PGSC0003DMT400075261	Potato	cytosol	37.6	26.78
HORVU7Hr1G098600.2	Barley	endoplasmic reticulum, extracellular, plasma membrane	44.0	26.57
PGSC0003DMT400011185	Potato	endoplasmic reticulum, extracellular, vacuole	40.4	26.37
Zm00001d014596_P001	Maize	endoplasmic reticulum, vacuole	42.4	26.3
PGSC0003DMT400016547	Potato	extracellular	36.0	26.24
Zm00001d007351_P001	Maize	plasma membrane	44.0	26.13
EES05386	Sorghum	extracellular, vacuole	43.6	25.89
Os02t0604000-00	Rice	extracellular	42.0	25.86
KXG30582	Sorghum	vacuole	40.0	25.51
TraesCS7B01G329900.1	Wheat	extracellular	44.4	25.34
KXG20727	Sorghum	endoplasmic reticulum, extracellular, vacuole	42.4	25.18
PGSC0003DMT400026549	Potato	extracellular, vacuole	40.0	25.0
HORVU7Hr1G098580.5	Barley	mitochondrion	32.0	19.66

Protein Annotations

EnsemblPlants:PGSC0003DMT400063633	EnsemblPlantsGene:PGSC0003DMG400024736	Gene3D:3.40.50.1110	InterPro:IPR036514	InterPro:SGNH_hydro_sf	PANTHER:PTHR22835
PANTHER:PTHR22835:SF289	PGSC:PGSC0003DMG400024736	UniParc:UPI000296BFF7	UniProt:M1CAY0	MapMan:35.1	:

Description

Alpha-L-fucosidase 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400024736]

Coordinates

chr1:-:76856604..76860711

Molecular Weight (calculated)

28345.4 Da

IEP (calculated)

8.810

GRAVY (calculated)

-0.163

Length

250 amino acids

Sequence
(BLAST)

001: MRESFCKAHS KCGKLPYGIN FYQNTTGRCS NGMLMIDYIA LESGLPLLNP FKDRSANFRH GVNFAVAGAT ALSNEIMADK KILNKVTNSS LSVQLDWLSS
101: HFETTCSTDC REKLKRSLFL VGEIGGNEFN FGLSQGKTIE EMRKIVPEVV QTIIHAVKRV IDFGATRIIV PGNFPIGCLS GMLTQFMTNK TTTYDEYHCL
201: KDLNNFAIFY NNHLRQAIDE LKKKYPNITL IYGDYYNAYM WLLQNAMRLA

Best Arabidopsis Sequence Match ( AT1G28570.1 )
(BLAST)

001: MATLFMKLVS FFLILSTFCL TTVNSEPQCH NFKSIISFGD SIADTGNLLA LSDPTNLPKV AFLPYGETFF HHPTGRFSNG RLIIDFIAEF LGFPLVPPFY
101: GSQNANFEKG VNFAVGGATA LERSFLEERG IHFPYTNVSL AVQLSSFKES LPNLCVSPSD CRDMIENSLI LMGEIGGNDY NYAFFVGKNI EEIKELVPLV
201: IETISSAITE LIGMGGKTFL VPGEFPLGCS VAYLSLYQTS NIEEYDPLTG CLKWLNKFSE YHDEQLQAEL NRLQKLYPHV NIIYADYYNT LLRLAQEPAK
301: FGFISRPLPA CCALGGPFNF TLGRKRGTQV PECCDDPSKY VSWDGVHMTE AAYRLMAEGI LKGPYAIPPF DWSCLSSEIK NTQNSLMNN

Arabidopsis Description

GDSL esterase/lipase At1g28570 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXJ1]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.