Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- extracellular 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400016546 | Potato | endoplasmic reticulum, vacuole | 88.85 | 77.78 |
| Solyc12g017460.1.1 | Tomato | extracellular | 86.38 | 75.61 |
| PGSC0003DMT400016547 | Potato | extracellular | 78.95 | 74.34 |
| PGSC0003DMT400075261 | Potato | cytosol | 50.77 | 46.72 |
| PGSC0003DMT400063633 | Potato | cytosol | 27.86 | 36.0 |
| PGSC0003DMT400063639 | Potato | cytosol | 39.32 | 35.08 |
| PGSC0003DMT400048871 | Potato | extracellular | 38.7 | 33.69 |
| PGSC0003DMT400067663 | Potato | extracellular | 37.77 | 32.36 |
| PGSC0003DMT400011187 | Potato | plasma membrane | 36.22 | 31.45 |
| PGSC0003DMT400011185 | Potato | endoplasmic reticulum, extracellular, vacuole | 35.91 | 30.29 |
| PGSC0003DMT400034313 | Potato | cytosol | 29.1 | 30.13 |
| PGSC0003DMT400026549 | Potato | extracellular, vacuole | 35.29 | 28.5 |
| PGSC0003DMT400034315 | Potato | cytosol | 29.41 | 25.96 |
| PGSC0003DMT400034309 | Potato | cytosol, nucleus, plasma membrane | 33.44 | 22.69 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400016545 | EnsemblPlantsGene:PGSC0003DMG400006461 | Gene3D:3.40.50.1110 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| GO:GO:0016788 | InterPro:GDSL | InterPro:IPR036514 | InterPro:SGNH_hydro_sf | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF298 |
| PFAM:PF00657 | PGSC:PGSC0003DMG400006461 | SEG:seg | SUPFAM:SSF52266 | UniParc:UPI000296405B | UniProt:M1A7U3 |
| MapMan:35.1 | : | : | : | : | : |
Description
GDSL-like Lipase/Acylhydrolase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400006461]
Coordinates
chr12:-:11121480..11122861
Molecular Weight (calculated)
35617.5 Da
IEP (calculated)
8.539
GRAVY (calculated)
0.024
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSVLPALPS SSAPTVPLTV KLSSEDPPAA SPTAAVITDF ISQSFKLSFL NAYLDRGASF SQGVNFAVAG ATALDTSFWT ARNIRLPTWN TPLSNQLNWF
101: KTHLQSTCGS RCAENLKKSI VIMGEWGGND YYNCFFQRKQ ITEVRTYVPF VVAGIMRGIK EVIQLGATRV LVPSIYPLGC LPLYLTSFPD NNTSGYDQLG
201: CLRNFNDFAS YHNRYMVRAI ANLQREFPNV SIVYGDFYGA ILSLIRNPSS FGFNQNTLLS ACCGTGGRHN FNFRTVCGAA GINACANPAQ YVHWDGIHLT
301: DEAHRRITEV LVRDMLAKFN CVV
101: KTHLQSTCGS RCAENLKKSI VIMGEWGGND YYNCFFQRKQ ITEVRTYVPF VVAGIMRGIK EVIQLGATRV LVPSIYPLGC LPLYLTSFPD NNTSGYDQLG
201: CLRNFNDFAS YHNRYMVRAI ANLQREFPNV SIVYGDFYGA ILSLIRNPSS FGFNQNTLLS ACCGTGGRHN FNFRTVCGAA GINACANPAQ YVHWDGIHLT
301: DEAHRRITEV LVRDMLAKFN CVV
001: MSTTKALSLL VFILFVSLVH SSDQCPINSI YQFGDSISDT GNLIRNGPAS SPTPKPLPQR EHNVFVNFGV SGSTALNSSF FSERNLHVPA TNTPLSMQLA
101: WFKGHLRSTC HGSSSDCLKH SLFMVGEIGG NDYNYGFFQG KPMEEIRSYI PHVVGAITAA AREVIRAGAV NVVVPGNFPV GCFPIYLTSF PVKDTKDYDD
201: NGCLTHLNEF AMDHNNQLQE AIASLRKEFP DVAIVYGDYY NAFQYVLRSE RFDKSVALKS CCGTGGAYNY DGKRPYGAVG VPVCQNPHKF ISWDGVHLTQ
301: KAYRFMSKFL NNQILSQIKC TRA
101: WFKGHLRSTC HGSSSDCLKH SLFMVGEIGG NDYNYGFFQG KPMEEIRSYI PHVVGAITAA AREVIRAGAV NVVVPGNFPV GCFPIYLTSF PVKDTKDYDD
201: NGCLTHLNEF AMDHNNQLQE AIASLRKEFP DVAIVYGDYY NAFQYVLRSE RFDKSVALKS CCGTGGAYNY DGKRPYGAVG VPVCQNPHKF ISWDGVHLTQ
301: KAYRFMSKFL NNQILSQIKC TRA
Arabidopsis Description
GDSL esterase/lipase At5g03980 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZB2]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.