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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 1
  • extracellular 7
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, secretory
BaCelLo:nucleus
EpiLoc:extracellular
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400034313 Potato cytosol 62.89 76.6
Solyc01g099020.2.1 Tomato nucleus 66.32 66.32
Solyc01g099050.2.1 Tomato extracellular, golgi, vacuole 58.42 58.89
Solyc01g099060.1.1 Tomato extracellular 58.68 58.68
Solyc01g099030.2.1 Tomato extracellular 57.37 58.13
Solyc01g099010.2.1 Tomato extracellular 56.32 57.07
VIT_14s0060g02080.t01 Wine grape endoplasmic reticulum, vacuole 48.95 49.73
Bra009496.1-P Field mustard extracellular 42.37 43.87
TraesCS3B01G151300.1 Wheat extracellular, vacuole 42.37 43.16
TraesCS3A01G308200.1 Wheat extracellular, golgi 42.11 43.01
TraesCS3D01G134200.1 Wheat extracellular, plasma membrane 42.11 43.01
CDY41414 Canola vacuole 37.11 42.99
HORVU3Hr1G024970.12 Barley endoplasmic reticulum, vacuole 42.11 42.44
CDX70269 Canola extracellular 36.58 42.38
GSMUA_Achr11P... Banana extracellular 40.79 41.44
Solyc12g017460.1.1 Tomato extracellular 40.0 41.19
AT5G03980.1 Thale cress vacuole 35.0 41.18
Os11t0521000-01 Rice plasma membrane 40.26 41.02
Solyc03g006240.2.1 Tomato nucleus 37.89 39.13
EES09797 Sorghum plasma membrane 39.47 38.76
TraesCS7D01G421100.1 Wheat endoplasmic reticulum, extracellular 36.84 38.46
TraesCS7A01G428800.1 Wheat extracellular 37.37 38.38
TraesCS7B01G329000.1 Wheat extracellular 37.37 38.38
TraesCS7A01G430000.1 Wheat extracellular 37.63 38.03
TraesCS7D01G421200.1 Wheat endoplasmic reticulum, extracellular 37.37 37.67
TraesCS7B01G329200.1 Wheat extracellular 37.11 37.6
TraesCS6B01G240600.1 Wheat vacuole 38.42 37.24
TraesCS7D01G421900.1 Wheat endoplasmic reticulum, extracellular, vacuole 36.84 37.14
TraesCS7A01G429100.2 Wheat extracellular 36.58 37.07
OQU85266 Sorghum extracellular 38.68 36.84
HORVU6Hr1G053960.1 Barley vacuole 38.16 36.8
TraesCS6A01G211100.1 Wheat extracellular, plasma membrane, vacuole 38.16 36.34
KXG30582 Sorghum vacuole 37.37 36.22
TraesCS6D01G194200.1 Wheat vacuole 37.89 36.09
TraesCS1D01G250200.1 Wheat extracellular, vacuole 38.68 36.03
Os06t0694200-01 Rice extracellular 35.79 35.88
Solyc03g006250.2.1 Tomato extracellular 35.79 35.79
Solyc12g096620.1.1 Tomato nucleus 35.79 35.79
Os02t0608801-00 Rice extracellular 37.89 35.73
TraesCS1A01G250600.1 Wheat endoplasmic reticulum 38.16 35.71
HORVU1Hr1G061910.1 Barley endoplasmic reticulum, golgi, mitochondrion 38.68 35.51
Zm00001d014596_P001 Maize endoplasmic reticulum, vacuole 37.63 35.48
TraesCS1B01G261200.1 Wheat endoplasmic reticulum, mitochondrion, vacuole 37.37 34.89
Zm00001d017140_P001 Maize endoplasmic reticulum, extracellular 37.11 34.64
Zm00001d007351_P001 Maize plasma membrane 38.16 34.44
Solyc10g008720.2.1 Tomato extracellular 35.0 34.28
Os02t0604000-00 Rice extracellular 36.58 34.24
KXG20727 Sorghum endoplasmic reticulum, extracellular, vacuole 37.63 33.97
HORVU7Hr1G098600.2 Barley endoplasmic reticulum, extracellular, plasma membrane 36.84 33.82
Solyc02g077120.2.1 Tomato cytosol 18.95 33.8
EES05386 Sorghum extracellular, vacuole 37.37 33.73
TraesCS7B01G329900.1 Wheat extracellular 37.11 32.19
Solyc10g008710.2.1 Tomato extracellular 31.58 31.75
HORVU7Hr1G098580.5 Barley mitochondrion 27.63 25.8
Protein Annotations
EnsemblPlants:Solyc01g099040.2.1EnsemblPlantsGene:Solyc01g099040.2Gene3D:3.40.50.1110GO:GO:0003674GO:GO:0003824GO:GO:0016787
GO:GO:0016788InterPro:GDSLInterPro:IPR036514InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likePANTHER:PTHR22835
PANTHER:PTHR22835:SF289PFAM:PF00657SEG:segSignalP:SignalP-noTMSUPFAM:SSF52266TMHMM:TMhelix
UniParc:UPI0002768B67UniProt:K4B0U1MapMan:35.1:::
Description
No Description!
Coordinates
chr1:-:89380659..89382721
Molecular Weight (calculated)
42576.5 Da
IEP (calculated)
6.816
GRAVY (calculated)
0.039
Length
380 amino acids
Sequence
(BLAST)
001: MAFTIRVAVL HLLILEITII SSLFLQANAQ ELLIKLEEPK LKKCGINRIY QFGDSLSDTG NCLRESYCGA HTGCRFPPYG MNFYQKEITG RCSNGLLMVD
101: FMALECGLPL LNPSLEENAN FSQGSNFAVA GATALSVEQL AERNISMSYT NSTLTVQLHW MSSHFNSICS TDCPKYLEKS LFLVGEIGGD ELAYGFIQGK
201: TIQELRTMVP DIVHAIIRGV TRVISFGATR IVVPGNIPAG CNPVILTIFG TTYDEYGCVK EWNNFMMYYN NHLKRGVYML KREYPNISIS YGDYYNAYLW
301: LRQNVVALGF DKNSVLKACC GIGGEYNYRA DMRCGNPGVK ACADPNSYIS WDGIHLTQRA YSWLTKWLID DIIPQLNCLV
Best Arabidopsis Sequence Match ( AT1G28580.1 )
(BLAST)
001: MAYPGSPILM KLLVFIFLST FVVTNVSSET KCREFKSIIS FGDSIADTGN LLGLSDPKDL PHMAFPPYGE NFFHHPTGRF SNGRLIIDFI AEFLGLPLVP
101: PFYGSHNANF EKGVNFAVGG ATALERSFLE DRGIHFPYTN VSLGVQLNSF KESLPSICGS PSDCRDMIEN ALILMGEIGG NDYNYAFFVD KGIEEIKELM
201: PLVITTISSA ITELIGMGGR TFLVPGEFPV GCSVLYLTSH QTSNMEEYDP LTGCLKWLNK FGENHGEQLR AELNRLQKLY PHVNIIYADY YNALFHLYQE
301: PAKFGFMNRP LSACCGAGGP YNYTVGRKCG TDIVESCDDP SKYVAWDGVH MTEAAYRLMA EGILNGPYAI PPFDWSCRSS GVKNSGSSDT
Arabidopsis Description
GDSL esterase/lipase At1g28580 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXJ2]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.