Factsheet for Solyc12g096620.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

nucleus: 25464976

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400075261	Potato	cytosol	77.63	84.05
Solyc12g017460.1.1	Tomato	extracellular	52.63	54.2
Solyc03g006250.2.1	Tomato	extracellular	39.74	39.74
Solyc01g099050.2.1	Tomato	extracellular, golgi, vacuole	37.63	37.93
Solyc01g099020.2.1	Tomato	nucleus	37.89	37.89
Solyc10g008710.2.1	Tomato	extracellular	37.63	37.83
Solyc01g099060.1.1	Tomato	extracellular	37.37	37.37
Solyc01g099030.2.1	Tomato	extracellular	36.84	37.33
Solyc01g099010.2.1	Tomato	extracellular	36.32	36.8
Solyc01g099040.2.1	Tomato	extracellular	35.79	35.79
Solyc03g006240.2.1	Tomato	nucleus	34.47	35.6
Solyc02g077120.2.1	Tomato	cytosol	19.74	35.21
Solyc10g008720.2.1	Tomato	extracellular	35.53	34.79

Protein Annotations

EnsemblPlants:Solyc12g096620.1.1	EnsemblPlantsGene:Solyc12g096620.1	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	PANTHER:PTHR22835
PANTHER:PTHR22835:SF298	PFAM:PF00657	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52266	TMHMM:TMhelix
UniParc:UPI0002769D4A	UniProt:K4DHD5	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr12:-:65455385..65456527

Molecular Weight (calculated)

41986.0 Da

IEP (calculated)

7.905

GRAVY (calculated)

0.090

Length

380 amino acids

Sequence
(BLAST)

001: MASLFLSKFS FFLLLIIITL FFHSSHCDVL TRCHITSLFQ FGDSIADAGN VIRIPGAVIS AQAWGLPYGE TFFHKPTGRF SDGRIIADYI ATALSLPFLN
101: PYMDKSGVSF SQGANFAVAG ATAMNNSFLE ERGIGHVPFN VPLPSQLEWF KSHLQSTYGS KYSTTLRNSL VVLGEFGGVD YWNALAGNKP EPEVRTYVPF
201: IIDGIISAIK EVIQLGSTRI LVPGVFPFGC LSSYLTRFAD TNPNAYDQYG CLKFYNDFAT YHNIELKKAL ENLRCEFPRV KIVYGDYYGG FRLVFRYASW
301: LGFNPSTLVS ACCGSGGRYN AGGCSSASTN VCPNPSQYVN WDGLHLTDEA YHRISNVVIN NMLPKFGCYG LRNSSALSSY

Best Arabidopsis Sequence Match ( AT1G28570.1 )
(BLAST)

001: MATLFMKLVS FFLILSTFCL TTVNSEPQCH NFKSIISFGD SIADTGNLLA LSDPTNLPKV AFLPYGETFF HHPTGRFSNG RLIIDFIAEF LGFPLVPPFY
101: GSQNANFEKG VNFAVGGATA LERSFLEERG IHFPYTNVSL AVQLSSFKES LPNLCVSPSD CRDMIENSLI LMGEIGGNDY NYAFFVGKNI EEIKELVPLV
201: IETISSAITE LIGMGGKTFL VPGEFPLGCS VAYLSLYQTS NIEEYDPLTG CLKWLNKFSE YHDEQLQAEL NRLQKLYPHV NIIYADYYNT LLRLAQEPAK
301: FGFISRPLPA CCALGGPFNF TLGRKRGTQV PECCDDPSKY VSWDGVHMTE AAYRLMAEGI LKGPYAIPPF DWSCLSSEIK NTQNSLMNN

Arabidopsis Description

GDSL esterase/lipase At1g28570 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXJ1]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.