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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 1
  • extracellular 8
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400048871 Potato extracellular 90.4 91.37
Solyc01g099030.2.1 Tomato extracellular 78.4 78.4
Solyc01g099050.2.1 Tomato extracellular, golgi, vacuole 68.27 67.9
Solyc01g099060.1.1 Tomato extracellular 65.87 65.0
Solyc01g099040.2.1 Tomato extracellular 57.07 56.32
Solyc01g099020.2.1 Tomato nucleus 57.07 56.32
VIT_14s0060g02080.t01 Wine grape endoplasmic reticulum, vacuole 52.27 52.41
TraesCS3B01G151300.1 Wheat extracellular, vacuole 45.07 45.31
TraesCS3D01G134200.1 Wheat extracellular, plasma membrane 44.8 45.16
TraesCS3A01G308200.1 Wheat extracellular, golgi 44.8 45.16
HORVU3Hr1G024970.12 Barley endoplasmic reticulum, vacuole 44.53 44.3
Bra009496.1-P Field mustard extracellular 43.2 44.14
CDX70269 Canola extracellular 37.87 43.29
CDY41414 Canola vacuole 37.6 42.99
Os11t0521000-01 Rice plasma membrane 42.67 42.9
GSMUA_Achr11P... Banana extracellular 42.67 42.78
TraesCS7D01G421900.1 Wheat endoplasmic reticulum, extracellular, vacuole 41.87 41.64
TraesCS7A01G430000.1 Wheat extracellular 41.6 41.49
AT5G03980.1 Thale cress vacuole 35.73 41.49
TraesCS7A01G428800.1 Wheat extracellular 40.8 41.35
TraesCS7D01G421100.1 Wheat endoplasmic reticulum, extracellular 40.0 41.21
EES09797 Sorghum plasma membrane 42.4 41.09
Solyc12g017460.1.1 Tomato extracellular 40.27 40.92
TraesCS7B01G329000.1 Wheat extracellular 40.0 40.54
Solyc02g077120.2.1 Tomato cytosol 22.93 40.38
TraesCS7D01G421200.1 Wheat endoplasmic reticulum, extracellular 40.53 40.32
TraesCS7A01G429100.2 Wheat extracellular 40.27 40.27
TraesCS7B01G329200.1 Wheat extracellular 40.27 40.27
TraesCS6B01G240600.1 Wheat vacuole 40.53 38.78
HORVU6Hr1G053960.1 Barley vacuole 40.27 38.32
Solyc03g006240.2.1 Tomato nucleus 37.33 38.04
Os02t0608801-00 Rice extracellular 40.8 37.97
TraesCS6D01G194200.1 Wheat vacuole 40.27 37.84
TraesCS6A01G211100.1 Wheat extracellular, plasma membrane, vacuole 40.0 37.59
Zm00001d007351_P001 Maize plasma membrane 42.13 37.53
Os06t0694200-01 Rice extracellular 37.87 37.47
HORVU7Hr1G098600.2 Barley endoplasmic reticulum, extracellular, plasma membrane 41.33 37.44
Solyc10g008720.2.1 Tomato extracellular 38.67 37.37
Solyc03g006250.2.1 Tomato extracellular 37.87 37.37
Zm00001d014596_P001 Maize endoplasmic reticulum, vacuole 39.2 36.48
HORVU1Hr1G061910.1 Barley endoplasmic reticulum, golgi, mitochondrion 40.27 36.47
Zm00001d017140_P001 Maize endoplasmic reticulum, extracellular 39.47 36.36
OQU85266 Sorghum extracellular 38.67 36.34
Solyc12g096620.1.1 Tomato nucleus 36.8 36.32
TraesCS1D01G250200.1 Wheat extracellular, vacuole 39.47 36.27
TraesCS7B01G329900.1 Wheat extracellular 41.87 35.84
KXG20727 Sorghum endoplasmic reticulum, extracellular, vacuole 40.0 35.63
TraesCS1B01G261200.1 Wheat endoplasmic reticulum, mitochondrion, vacuole 38.67 35.63
TraesCS1A01G250600.1 Wheat endoplasmic reticulum 38.4 35.47
KXG30582 Sorghum vacuole 36.53 34.95
EES05386 Sorghum extracellular, vacuole 38.93 34.68
Solyc10g008710.2.1 Tomato extracellular 34.93 34.66
Os02t0604000-00 Rice extracellular 36.53 33.74
HORVU7Hr1G098580.5 Barley mitochondrion 30.93 28.5
Protein Annotations
EnsemblPlants:Solyc01g099010.2.1EnsemblPlantsGene:Solyc01g099010.2Gene3D:3.40.50.1110GO:GO:0003674GO:GO:0003824GO:GO:0016787
GO:GO:0016788InterPro:GDSLInterPro:IPR036514InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likePANTHER:PTHR22835
PANTHER:PTHR22835:SF289PFAM:PF00657SEG:segSignalP:SignalP-noTMSUPFAM:SSF52266UniParc:UPI0002768B64
UniProt:K4B0T8MapMan:35.1::::
Description
No Description!
Coordinates
chr1:-:89352460..89355419
Molecular Weight (calculated)
42335.8 Da
IEP (calculated)
5.778
GRAVY (calculated)
-0.052
Length
375 amino acids
Sequence
(BLAST)
001: MAATIILLLT LLTVKIGDAE QQVLLKLKNP RLMNCRFDKI YQFGDSISDT GNCIRESLCK AQFWCKRPPY GMDFYKHVTG RCSNGMLIID FIAMECDLPL
101: LNPYKDENAE FRHGVNFAVA GSTAISAEFL AENNIDNIGA TNSSLSVQLD WMSSHFHTTC SPNCPEKLNN SLFLVGEIGG NEFNFGFLQD KTIEESRKIV
201: PEVVQTIIHS VKRIIGFGAT RIIVPGNFPI GCIPFFLTKF MTNNSTAFDK HHCLKDLNNF VIFYNRYLQQ AIDELKNDYP NITLIYGDYY NAFMWLLENA
301: VSLGFDNNSL QKACCGIGGE YNYNGHISCG DPMVPACVDP NTHISWDGIH FTQNAYSWLA RWLIDDMLPK LNCQV
Best Arabidopsis Sequence Match ( AT5G03980.1 )
(BLAST)
001: MSTTKALSLL VFILFVSLVH SSDQCPINSI YQFGDSISDT GNLIRNGPAS SPTPKPLPQR EHNVFVNFGV SGSTALNSSF FSERNLHVPA TNTPLSMQLA
101: WFKGHLRSTC HGSSSDCLKH SLFMVGEIGG NDYNYGFFQG KPMEEIRSYI PHVVGAITAA AREVIRAGAV NVVVPGNFPV GCFPIYLTSF PVKDTKDYDD
201: NGCLTHLNEF AMDHNNQLQE AIASLRKEFP DVAIVYGDYY NAFQYVLRSE RFDKSVALKS CCGTGGAYNY DGKRPYGAVG VPVCQNPHKF ISWDGVHLTQ
301: KAYRFMSKFL NNQILSQIKC TRA
Arabidopsis Description
GDSL esterase/lipase At5g03980 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZB2]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.