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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 2
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:cytosol
YLoc:plastid
mitochondrion: 26136264
msms PMID: 26136264 doi
S Wang, G Zhang, Y Zhang, Q Song, Z Chen, J Wang, J Guo, N Niu, J Wang, S Ma
College of Agronomy, Northwest A&F University, National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Yangling, Shaanxi 712100, P. R. China zhanggaisheng18@sohu.com., College of Agronomy, Northwest A&F University, National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Yangling, Shaanxi 712100, P. R. China., Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, P. R. China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G529300.1 Wheat cytosol, plastid 97.93 98.0
TraesCS7A01G543400.2 Wheat plastid 97.74 97.82
HORVU7Hr1G118750.2 Barley plastid 96.56 96.96
Os06t0724700-01 Rice mitochondrion 15.05 85.15
TraesCS1B01G298500.2 Wheat cytosol 15.83 80.6
OQU77126 Sorghum cytosol 75.33 75.5
Zm00001d014813_P006 Maize cytosol 75.55 75.17
GSMUA_Achr1P26290_001 Banana plastid 57.17 62.72
VIT_03s0038g02970.t01 Wine grape cytosol 59.54 58.74
KRH36116 Soybean cytosol 57.91 57.2
Solyc01g111870.1.1 Tomato cytosol 56.84 56.34
CDX99625 Canola cytosol 53.74 55.33
CDY15923 Canola cytosol 53.66 55.07
AT5G40820.2 Thale cress cytosol, nucleus, plasma membrane 54.55 54.57
Bra030327.1-P Field mustard cytosol, peroxisome, plasma membrane 54.73 41.24
TraesCS1B01G342800.2 Wheat cytosol 18.01 16.19
TraesCS1B01G241900.3 Wheat nucleus 14.46 15.8
TraesCS4B01G069200.1 Wheat cytosol, mitochondrion 11.46 8.39
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.1070.11
MapMan:14.1.2MapMan:18.4.7.1Gene3D:3.30.1010.10InterPro:ARM-type_foldInterPro:FATC_domGO:GO:0003674
GO:GO:0003824GO:GO:0004674GO:GO:0005488GO:GO:0005515GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016301GO:GO:0016740InterPro:IPR000403InterPro:IPR003152InterPro:IPR014009
InterPro:IPR036940InterPro:Kinase-like_dom_sfPFAM:PF00454PFAM:PF02259PFAM:PF02260PFAM:PF08064
InterPro:PI3/4_kinase_CSInterPro:PI3/4_kinase_cat_domInterPro:PI3/4_kinase_cat_sfInterPro:PIK-rel_kinase_FATInterPro:PIK_FATScanProsite:PS00916
PFscan:PS50290PFscan:PS51189PFscan:PS51190PANTHER:PTHR11139PANTHER:PTHR11139:SF69SMART:SM00146
SMART:SM00802SMART:SM01343SUPFAM:SSF48371SUPFAM:SSF56112EnsemblPlantsGene:TraesCS7B01G465500EnsemblPlants:TraesCS7B01G465500.1
InterPro:UMETIGR:cd00892SEG:seg:::
Description
No Description!
Coordinates
chr7B:-:721815994..721827253
Molecular Weight (calculated)
302315.0 Da
IEP (calculated)
6.924
GRAVY (calculated)
-0.005
Length
2704 amino acids
Sequence
(BLAST)
0001: MSNFAGHIKE LRALIAGSSS SSAAPASAHY EAKLREVLPS LLRDHVLPAP TATEMETSVV LRLLTYTAHR FPRVFSNGRP AEVIRVIGRI LPLFADPDYQ
0101: SIIFEPVWSL LSLLRTGDRE AYRQFFLDAM VAVEDLQYVA SKHTESGCLL KCFCGSFSDI LESPAIFSDL PESFQPKNGP GVLIDLSGDM RWCSFATSLI
0201: RLINKCLTDG TLHVEGVVTM PFVSAACSIL CYGDESLHKV CFDFARIVAT VMTVEILPTE TIIRSITSIL SQDVNELSSI RDPDYDLSVG ACLHALHSSC
0301: PGYIVESTAA DIVNVFTRAV QTSRSSELQA AMCNAYMRIV EVCSPQVWKP EILLKLLYLP KPYDKVTECI RLVVDKFGQS SVSVDASDDR GSFQEKSEVS
0401: DLPKVGQKRV AQNQENTLYK RQKMSESRST IGSFMTKLSP AGIGHELAKD YAYDLQLSLN SRIKFLSPDN HNAYPLEPDI AIQVLSLLSL SFCVNPKTSL
0501: FISISKQVLS WIPWICKQAT EKCFFSFDML LYFRALQTVM LLRSFHPGDS KLFGDEARLI GDRSEDLDYP LYVDLISLLK RVWSDGHVST QTSLDWNLKC
0601: LVVQVIAKIG SRLNIDCDLE LLELAIHSES VEVQNEALMS LPIIVLYSGP SMLGVMFKKL EFFGDLGSDD KVWKCVAFSL GFLSCLNGTT DVTDKAGNSC
0701: KLFMDKDSKQ PVSTLDLLLK GFWCPHCDNR TVNTKEQISV VDMAVLEAEN VALKHNIFKA HTLFFKFLYA QTSKECIISM VEVLPRVLRH SSKEVLLEMK
0801: IKWVKCIDFL LLNGMKDVRD AFSLVVCCFL ENRVMDILFS DELGMEGGTK ELKFMDKIKQ AFAEAEDSHV LLTLLESTAT IMQASDTQGE VFFCSFVLLI
0901: AQLDNHDPIV RKTASRLLHR CCTYSFKEGI ELFLSNNFHV RDDLYDYLSS RLLNHPVVIS EFAEAVLGIK TEELIRRMVP SVIPKLIVSH PDNDQAVITL
1001: HELANHLNTE LVPLIVNSLP KVLSFALFYE DGQHLPSVLQ FYHTETGSDS KEIFAAALPT LLDEIICFPG ESDHIATDRR TTRISPTIQN IARILTGNDT
1101: LPEFLKNDFV RLLNSIDKKM LHSDDLKLQK QSLQRIRKLV EMMGPYLSTH APKIMVLLIF ATDKEALQMD GLDVLHFFIK QLAEVSSTSI KYVMSQVVAA
1201: FIPSLEKCRE CPSVHLRKIV EILEELVVKN SKLLKQHIRE LPLLPNLPSL SEVNKVIQEA RGSMTLQDHL KDAVDGLNHE SLNVRYMVAC ELSKLFKAKR
1301: EDVTALIIGE DISDLDVISA LIMALLKGCA EESRTMVGQR LKLVCADCLG ALGAVDPAKF KVISCERFKI ECSDDDLIFE LIHKHLARAF RAASDTTVQD
1401: SAALAIQELL KLAGCQSLPK EDNGEDSSSC EMSRRGQKLW GRFSSYVKEI IAPCLTSRFH LPSVNDAALL GPIYRPTMSF RRWIYYWIRK LTSHATGSRY
1501: GIFSACRGIV RHDMPTALYL LPYLVLNAVC YGTPEARQSI TDEILSVLNA AASESSGAIV HGITGGQSEV CVQAIFTLLD NLGQWVDDLK QEIALSQSNN
1601: AMAGRQAGKL NDETCSNNGQ DQLLVQCSNV AELLAAIPKV TLAKTSFRCQ AHARALAYFE SHVREKSGSS NPAAECSGTF SDDDISFLME IYGGLDEPDG
1701: LLGLANLRNS SSLQDQLIIN EKAGNWAEVL TLCEHALQME PDSVHRHCDV LNCSLNMCHL QAMIAHVDGL VGRIPQYKKT WCMQGVQAAW RLGRWDLMDE
1801: YLPEADKGLV YSSTENSASF DIGLAKIFKA MTTKDQFMVA EKIAQSKQAL LVPLAAAGMD SYMRAYPYIV KLHMLCELED FNSLLGDESF LDKSFSADDP
1901: SFLKLTKDWD NRLKCTQSSL WAREPLLAFR RMVYNLSHMN SQVGNCWLQY AKLCRLAGHY ETAHRAILEA DASGAPNVHM EKAKHLWNIR KSDSAIAELQ
2001: QTLLNMPTEV LGNAVLSSLS SLSLALPNAP ISATQASKEN PDVSKTLLLY TRWIHNTGQK QSEEIKTLYS RVTELRPKWE KGFFCMAKFL DDLLVDARKR
2101: QEDKKFTGGV GSVTPGSAGS ASAPAKERPW WELVPTVLLC YAKGLHKGHK NLFQALPRLL TVWFEFGNIY IQEGPSAEMK VVHDRMLAVV RGCSKDLPTY
2201: QWLTVLSQLI SRICHQNAEL VRVVRYIIQV VLQAYPQQAL WMMAAVSKST VSARREAATQ ILKLAKKGVG KRSDYVALFN QFPSLIEHLI KLCFHPGQPK
2301: ARSINISTEF SSLKRMMPLG IILPIQQALT VTLPSYDSNM SGQSTFHPFS ISEHPTIAGI ADDAEILSSL QKPKKVVFLG SDGVARPFLC KPKDDLRKDA
2401: RMMEFNAVIN RLLSKVPESR RRKLYIRTFA VVPLTEDCGL VEWVPNTRGL RHILQDIYIT CGKYDRMKTN SQMKRIYDVC HASKIPEDEM MKTKILPLFP
2501: PVFHKWFLTT FSEPAAWFRA RVAYAHTAAV WSMVGHIVGL GDRHGENILI DATTGDCVHV DFSCLFDKGL QLEKPEVVPF RLTQNMIDGL GIAGYEGVFL
2601: KVCEITLSVL RGHKEALMTV LETFIHDPLV EWTKAHKSSG GEVRNPQAQR AIANITARLQ GVVVGVNAAP SLPLSVEGQA RRLIAEAVSH KNLGKMYIWW
2701: MPWF
Best Arabidopsis Sequence Match ( AT5G40820.2 )
(BLAST)
0001: MAKDDNNLSS LVHELRERVA ASASTPANNL RHSSGDEDAL EIRFRAVIPN LLNTYVVPSL GNGREVTAVL KLVGHTARNI PGVFYHGTPS AILPVIARII
0101: PFFAEPEFVP GHGVLLETVG SLLMLLRSNS RKAYRIFFHD ALQAIQDMQP IASLHSIEPE VCESHIPFRC FCMSFSGIGG DLPDANKPRD GDGLVLNLLG
0201: ANRWQPFATC ILKLICKCLT EGTLYVQGLI HTSFFKAACS LVCCGGADVQ MACFEFATLV GSILTFNILP HVALIQSIIL LLSADEGLPV YRNTIYDSTI
0301: GRFLTAVYSS CSDAAVKLTA ESLVLVLSHA LQRTKSEELK ASLCSAYVRI VKSCPPCIWK IHCLLELLHL PEPCFQLIEC FKAVLIVLGP GCVRVETTKC
0401: GSHTSATSDR PVQGINAGKK RHIEDESTYK RKRQKVGDDI RRGVYFAPEF ADETDGKDAA SLREMLISTV ESLKPPPAGP SLSQTESSIV ALSMLTNAFC
0501: FCPWTDMTHR LFNQMYAWIP WIAGQVEETN PIMFDISIYL EGIHNLLLVA GVDPQYEYTS KGNDLVAIQF LLKLPWTHYM LFKTPSSLVK SKCLSVGIWT
0601: KLGLQDGSDF DIFSWSLSDD FEQVQAVAAI SMPLKVLFSG LGALLHMFPK LEHLLEEKEL MIKKAIPQSL GFLSCLYGSS TTDSEKTACH LLLHEDLKKD
0701: ETLNSLLQGF RCSKCDKFIE REDEKHFRII ETPEMVKLKM DHHRDYFNLQ SLYFNLLYDE SSEETQLACV EVIRRILGHT SPDILVRTRS QWIRCLQYLL
0801: VHVNTDVREA FCAQIGIFVQ HPIVSCLFLS EDATEKSCER NFFNLIEHSL AAAKDLLVIQ TLLETTAEVM VAVDVTSELF LICLFLLIDQ LDHPNLIVRI
0901: NASKLINRSC YIHVKGGFAT LLSTASHIQN ELFDNLSVRL TSRPNVVREF AEAVLGVETE ELVRKMVPAV LPKLLVYWQE NAQAANTLNE LAKLIDTDVV
1001: PLIVNWLPRV LAFALNQEED KNLLSVLQLY HSQIGSDNQE IFAAALPALL DELVCFVDIA DTPETDRRLQ RLPDAIKKIS KVLTNAEDLP GFLQNHFVGL
1101: LNSIDRKMLH ADDIFLQKQA LKRIKLLIEM MGHYLSTYVP KLMVLLMHAI EKDALQSEGL LVLHFFTRKL ADVSPSSIKY VISQIFAALI PFLEKEKEGP
1201: HVYLDEVVKI LEELVLKNRD IVKEHICEFP LLPSIPSLGE LNNAIQEARG LMSLKDQLRD IVNGMKHENL NVRYMVACEL SKLLYNRNED VAALIAGELV
1301: SDMEILSSLI TYLLQGCAEE SRTTVGQRLK LVCADCLGAI GAIDPAKVRV ASCSRFKIQC SDDDLIFELI HKHLARAFRA AQDTIIQDSA ALAIQELLKI
1401: AGCEPSLAGN VVVLTPQEHV QVNVSGSRRC GGNNEVKDRG QKLWDRFSNY VKELIAPCLT SRFQLPNVSD PGSAGPIYRP SMSFRRWLSY WIRKLTAFAT
1501: GSRVSIFAAC RGIVRHDMQT ATYLLPYLVL DVVCHGTEAA RLSISEEILS VLDAAASENS GVTINSFGVG QSEVCVQAVF TLLDNLGQWV DDVKQGVALS
1601: SSLQSSGGRQ VAPKSKDQVS NSTTEQDHLL VQCKYVLELL LAIPKVTLAR ASFRCQAYAR SLMYLESHVR GKSGSLNPAA EKTGIFENAD VSSLMGIYSC
1701: LDEPDGLSGF ASLSKSLNLQ DQLLINKKSG NWADVFTACE QALQMEPTSV QRHSDVLNCL LNMCHHQTMV THVDGLISRV PEYKKTWCTQ GVQAAWRLGK
1801: WDLMDEYLDG ADAEGLLFSS SDSNASFDRD VAKILHAMMK KDQYSVAEGI AISKQALIAP LAAAGMDSYT RAYPFVVKLH LLRELEDFQA VLNGDSYLEK
1901: SFSTSDQVFS KAVDNWENRL RFTQSSLWTR EPLLAFRRLV FGASGLGAQV GNCWLQYAKL CRLAGHYETA HRAILEAQAS GAPNVHMEKA KLLWITKRSD
2001: SAIIELQQSL LNMPEGVVDS TVISSINSLL MAPPNPEPTV RNTQSFKEKK DVAKTLLLYS KWIHHSGQKQ KKDVLNLYTQ VKELLPWEKG YFHLAKYYDE
2101: LYVDARKCQQ ESSVFSSAGS KKGSVSSNLS TEKAGWDYLF KGMYFYAKAL HSGHKNLFQA LPRLLTLWFD FGTIYKTSGS AGNKELKSTH MKIMSLMRGC
2201: LKDLPTYQWL TVLPQLVSRI CHQNADTVLM VKNIITSVLH QFPQQGLWIM AAVSKSTVPA RREAAAEIIQ GARKGFNQSD RGHNLFIQFA SLTDHFIKLC
2301: FHGGQPRSKV INIATEFSAL KRMMPLDIIM PIQQSLTISL PAFHMNNNER HSASVFSGSD LPTISGIADE AEILSSLQRP KKIILLGNDG IEYPFLCKPK
2401: DDLRKDARMM EFTAMINRLL SKYPESRRRK LYIRTFAVAP LTEDCGLVEW VPHTRGLRHI LQDIYISCGK FDRQKTNPQI KRIYDQCAVK KEYEMLKTKI
2501: LPMFPPVFHK WFLTTFSEPA AWFRSRVAYA HTTAVWSMVG HIVGLGDRHG ENILFDSTSG DCVHVDFSCL FDKGLQLEKP ELVPFRLTQN MIDGLGITGY
2601: EGIFMRVCEI TLTVLRTHRE TLMSILETFI HDPLVEWTKS HKSSGVEVQN PHAQRAISSI EARLQGVVVG VPLPVEGQAR RLIADAVSLE NLGKMYIWWM
2701: PWF
Arabidopsis Description
ATRAD3Ataxia telangiectasia-mutated and RAD3-related [Source:TAIR;Acc:AT5G40820]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.