Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX99625 | Canola | cytosol | 86.46 | 88.99 |
| CDY15923 | Canola | cytosol | 86.16 | 88.39 |
| Os06t0724700-01 | Rice | mitochondrion | 13.39 | 75.73 |
| Bra030327.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 88.83 | 66.9 |
| VIT_03s0038g02970.t01 | Wine grape | cytosol | 65.7 | 64.79 |
| KRH36116 | Soybean | cytosol | 65.11 | 64.28 |
| Solyc01g111870.1.1 | Tomato | cytosol | 62.23 | 61.66 |
| TraesCS1B01G298500.2 | Wheat | cytosol | 11.91 | 60.64 |
| GSMUA_Achr1P26290_001 | Banana | plastid | 53.09 | 58.22 |
| OQU77126 | Sorghum | cytosol | 55.05 | 55.15 |
| Zm00001d014813_P006 | Maize | cytosol | 55.23 | 54.93 |
| HORVU7Hr1G118750.2 | Barley | plastid | 54.72 | 54.92 |
| TraesCS7A01G543400.2 | Wheat | plastid | 54.79 | 54.81 |
| TraesCS7D01G529300.1 | Wheat | cytosol, plastid | 54.72 | 54.74 |
| TraesCS7B01G465500.1 | Wheat | mitochondrion | 54.57 | 54.55 |
| AT3G48190.2 | Thale cress | cytosol, nucleus, plastid | 17.68 | 15.86 |
| AT1G50030.1 | Thale cress | plastid | 14.17 | 15.44 |
Protein Annotations
| KEGG:04150+2.7.11.1 | KEGG:04151+2.7.11.1 | KEGG:04714+2.7.11.1 | KEGG:04926+2.7.11.1 | KEGG:05165+2.7.11.1 | Gene3D:1.10.1070.11 |
| MapMan:14.1.2 | MapMan:18.4.7.1 | Gene3D:3.30.1010.10 | EntrezGene:834082 | UniProt:A0A1R7T394 | ProteinID:ANM71088.1 |
| InterPro:ARM-type_fold | ArrayExpress:AT5G40820 | EnsemblPlantsGene:AT5G40820 | RefSeq:AT5G40820 | TAIR:AT5G40820 | RefSeq:AT5G40820-TAIR-G |
| EnsemblPlants:AT5G40820.2 | Symbol:ATRAD3 | Unigene:At.475 | InterPro:FATC_dom | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 |
| GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000403 | InterPro:IPR003152 | InterPro:IPR014009 | InterPro:IPR036940 |
| InterPro:Kinase-like_dom_sf | RefSeq:NP_001332644.1 | PFAM:PF00454 | PFAM:PF02259 | PFAM:PF02260 | PFAM:PF08064 |
| InterPro:PI3/4_kinase_CS | InterPro:PI3/4_kinase_cat_dom | InterPro:PI3/4_kinase_cat_sf | InterPro:PIK-rel_kinase_FAT | InterPro:PIK_FAT | ScanProsite:PS00916 |
| PFscan:PS50290 | PFscan:PS51189 | PFscan:PS51190 | PANTHER:PTHR11139 | PANTHER:PTHR11139:SF69 | SMART:SM00146 |
| SMART:SM00802 | SMART:SM01343 | SUPFAM:SSF48371 | SUPFAM:SSF56112 | InterPro:UME | UniParc:UPI0008488F42 |
| SEG:seg | : | : | : | : | : |
Description
ATRAD3Ataxia telangiectasia-mutated and RAD3-related [Source:TAIR;Acc:AT5G40820]
Coordinates
chr5:-:16342728..16353898
Molecular Weight (calculated)
302454.0 Da
IEP (calculated)
7.041
GRAVY (calculated)
0.002
Length
2703 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAKDDNNLSS LVHELRERVA ASASTPANNL RHSSGDEDAL EIRFRAVIPN LLNTYVVPSL GNGREVTAVL KLVGHTARNI PGVFYHGTPS AILPVIARII
0101: PFFAEPEFVP GHGVLLETVG SLLMLLRSNS RKAYRIFFHD ALQAIQDMQP IASLHSIEPE VCESHIPFRC FCMSFSGIGG DLPDANKPRD GDGLVLNLLG
0201: ANRWQPFATC ILKLICKCLT EGTLYVQGLI HTSFFKAACS LVCCGGADVQ MACFEFATLV GSILTFNILP HVALIQSIIL LLSADEGLPV YRNTIYDSTI
0301: GRFLTAVYSS CSDAAVKLTA ESLVLVLSHA LQRTKSEELK ASLCSAYVRI VKSCPPCIWK IHCLLELLHL PEPCFQLIEC FKAVLIVLGP GCVRVETTKC
0401: GSHTSATSDR PVQGINAGKK RHIEDESTYK RKRQKVGDDI RRGVYFAPEF ADETDGKDAA SLREMLISTV ESLKPPPAGP SLSQTESSIV ALSMLTNAFC
0501: FCPWTDMTHR LFNQMYAWIP WIAGQVEETN PIMFDISIYL EGIHNLLLVA GVDPQYEYTS KGNDLVAIQF LLKLPWTHYM LFKTPSSLVK SKCLSVGIWT
0601: KLGLQDGSDF DIFSWSLSDD FEQVQAVAAI SMPLKVLFSG LGALLHMFPK LEHLLEEKEL MIKKAIPQSL GFLSCLYGSS TTDSEKTACH LLLHEDLKKD
0701: ETLNSLLQGF RCSKCDKFIE REDEKHFRII ETPEMVKLKM DHHRDYFNLQ SLYFNLLYDE SSEETQLACV EVIRRILGHT SPDILVRTRS QWIRCLQYLL
0801: VHVNTDVREA FCAQIGIFVQ HPIVSCLFLS EDATEKSCER NFFNLIEHSL AAAKDLLVIQ TLLETTAEVM VAVDVTSELF LICLFLLIDQ LDHPNLIVRI
0901: NASKLINRSC YIHVKGGFAT LLSTASHIQN ELFDNLSVRL TSRPNVVREF AEAVLGVETE ELVRKMVPAV LPKLLVYWQE NAQAANTLNE LAKLIDTDVV
1001: PLIVNWLPRV LAFALNQEED KNLLSVLQLY HSQIGSDNQE IFAAALPALL DELVCFVDIA DTPETDRRLQ RLPDAIKKIS KVLTNAEDLP GFLQNHFVGL
1101: LNSIDRKMLH ADDIFLQKQA LKRIKLLIEM MGHYLSTYVP KLMVLLMHAI EKDALQSEGL LVLHFFTRKL ADVSPSSIKY VISQIFAALI PFLEKEKEGP
1201: HVYLDEVVKI LEELVLKNRD IVKEHICEFP LLPSIPSLGE LNNAIQEARG LMSLKDQLRD IVNGMKHENL NVRYMVACEL SKLLYNRNED VAALIAGELV
1301: SDMEILSSLI TYLLQGCAEE SRTTVGQRLK LVCADCLGAI GAIDPAKVRV ASCSRFKIQC SDDDLIFELI HKHLARAFRA AQDTIIQDSA ALAIQELLKI
1401: AGCEPSLAGN VVVLTPQEHV QVNVSGSRRC GGNNEVKDRG QKLWDRFSNY VKELIAPCLT SRFQLPNVSD PGSAGPIYRP SMSFRRWLSY WIRKLTAFAT
1501: GSRVSIFAAC RGIVRHDMQT ATYLLPYLVL DVVCHGTEAA RLSISEEILS VLDAAASENS GVTINSFGVG QSEVCVQAVF TLLDNLGQWV DDVKQGVALS
1601: SSLQSSGGRQ VAPKSKDQVS NSTTEQDHLL VQCKYVLELL LAIPKVTLAR ASFRCQAYAR SLMYLESHVR GKSGSLNPAA EKTGIFENAD VSSLMGIYSC
1701: LDEPDGLSGF ASLSKSLNLQ DQLLINKKSG NWADVFTACE QALQMEPTSV QRHSDVLNCL LNMCHHQTMV THVDGLISRV PEYKKTWCTQ GVQAAWRLGK
1801: WDLMDEYLDG ADAEGLLFSS SDSNASFDRD VAKILHAMMK KDQYSVAEGI AISKQALIAP LAAAGMDSYT RAYPFVVKLH LLRELEDFQA VLNGDSYLEK
1901: SFSTSDQVFS KAVDNWENRL RFTQSSLWTR EPLLAFRRLV FGASGLGAQV GNCWLQYAKL CRLAGHYETA HRAILEAQAS GAPNVHMEKA KLLWITKRSD
2001: SAIIELQQSL LNMPEGVVDS TVISSINSLL MAPPNPEPTV RNTQSFKEKK DVAKTLLLYS KWIHHSGQKQ KKDVLNLYTQ VKELLPWEKG YFHLAKYYDE
2101: LYVDARKCQQ ESSVFSSAGS KKGSVSSNLS TEKAGWDYLF KGMYFYAKAL HSGHKNLFQA LPRLLTLWFD FGTIYKTSGS AGNKELKSTH MKIMSLMRGC
2201: LKDLPTYQWL TVLPQLVSRI CHQNADTVLM VKNIITSVLH QFPQQGLWIM AAVSKSTVPA RREAAAEIIQ GARKGFNQSD RGHNLFIQFA SLTDHFIKLC
2301: FHGGQPRSKV INIATEFSAL KRMMPLDIIM PIQQSLTISL PAFHMNNNER HSASVFSGSD LPTISGIADE AEILSSLQRP KKIILLGNDG IEYPFLCKPK
2401: DDLRKDARMM EFTAMINRLL SKYPESRRRK LYIRTFAVAP LTEDCGLVEW VPHTRGLRHI LQDIYISCGK FDRQKTNPQI KRIYDQCAVK KEYEMLKTKI
2501: LPMFPPVFHK WFLTTFSEPA AWFRSRVAYA HTTAVWSMVG HIVGLGDRHG ENILFDSTSG DCVHVDFSCL FDKGLQLEKP ELVPFRLTQN MIDGLGITGY
2601: EGIFMRVCEI TLTVLRTHRE TLMSILETFI HDPLVEWTKS HKSSGVEVQN PHAQRAISSI EARLQGVVVG VPLPVEGQAR RLIADAVSLE NLGKMYIWWM
2701: PWF
0101: PFFAEPEFVP GHGVLLETVG SLLMLLRSNS RKAYRIFFHD ALQAIQDMQP IASLHSIEPE VCESHIPFRC FCMSFSGIGG DLPDANKPRD GDGLVLNLLG
0201: ANRWQPFATC ILKLICKCLT EGTLYVQGLI HTSFFKAACS LVCCGGADVQ MACFEFATLV GSILTFNILP HVALIQSIIL LLSADEGLPV YRNTIYDSTI
0301: GRFLTAVYSS CSDAAVKLTA ESLVLVLSHA LQRTKSEELK ASLCSAYVRI VKSCPPCIWK IHCLLELLHL PEPCFQLIEC FKAVLIVLGP GCVRVETTKC
0401: GSHTSATSDR PVQGINAGKK RHIEDESTYK RKRQKVGDDI RRGVYFAPEF ADETDGKDAA SLREMLISTV ESLKPPPAGP SLSQTESSIV ALSMLTNAFC
0501: FCPWTDMTHR LFNQMYAWIP WIAGQVEETN PIMFDISIYL EGIHNLLLVA GVDPQYEYTS KGNDLVAIQF LLKLPWTHYM LFKTPSSLVK SKCLSVGIWT
0601: KLGLQDGSDF DIFSWSLSDD FEQVQAVAAI SMPLKVLFSG LGALLHMFPK LEHLLEEKEL MIKKAIPQSL GFLSCLYGSS TTDSEKTACH LLLHEDLKKD
0701: ETLNSLLQGF RCSKCDKFIE REDEKHFRII ETPEMVKLKM DHHRDYFNLQ SLYFNLLYDE SSEETQLACV EVIRRILGHT SPDILVRTRS QWIRCLQYLL
0801: VHVNTDVREA FCAQIGIFVQ HPIVSCLFLS EDATEKSCER NFFNLIEHSL AAAKDLLVIQ TLLETTAEVM VAVDVTSELF LICLFLLIDQ LDHPNLIVRI
0901: NASKLINRSC YIHVKGGFAT LLSTASHIQN ELFDNLSVRL TSRPNVVREF AEAVLGVETE ELVRKMVPAV LPKLLVYWQE NAQAANTLNE LAKLIDTDVV
1001: PLIVNWLPRV LAFALNQEED KNLLSVLQLY HSQIGSDNQE IFAAALPALL DELVCFVDIA DTPETDRRLQ RLPDAIKKIS KVLTNAEDLP GFLQNHFVGL
1101: LNSIDRKMLH ADDIFLQKQA LKRIKLLIEM MGHYLSTYVP KLMVLLMHAI EKDALQSEGL LVLHFFTRKL ADVSPSSIKY VISQIFAALI PFLEKEKEGP
1201: HVYLDEVVKI LEELVLKNRD IVKEHICEFP LLPSIPSLGE LNNAIQEARG LMSLKDQLRD IVNGMKHENL NVRYMVACEL SKLLYNRNED VAALIAGELV
1301: SDMEILSSLI TYLLQGCAEE SRTTVGQRLK LVCADCLGAI GAIDPAKVRV ASCSRFKIQC SDDDLIFELI HKHLARAFRA AQDTIIQDSA ALAIQELLKI
1401: AGCEPSLAGN VVVLTPQEHV QVNVSGSRRC GGNNEVKDRG QKLWDRFSNY VKELIAPCLT SRFQLPNVSD PGSAGPIYRP SMSFRRWLSY WIRKLTAFAT
1501: GSRVSIFAAC RGIVRHDMQT ATYLLPYLVL DVVCHGTEAA RLSISEEILS VLDAAASENS GVTINSFGVG QSEVCVQAVF TLLDNLGQWV DDVKQGVALS
1601: SSLQSSGGRQ VAPKSKDQVS NSTTEQDHLL VQCKYVLELL LAIPKVTLAR ASFRCQAYAR SLMYLESHVR GKSGSLNPAA EKTGIFENAD VSSLMGIYSC
1701: LDEPDGLSGF ASLSKSLNLQ DQLLINKKSG NWADVFTACE QALQMEPTSV QRHSDVLNCL LNMCHHQTMV THVDGLISRV PEYKKTWCTQ GVQAAWRLGK
1801: WDLMDEYLDG ADAEGLLFSS SDSNASFDRD VAKILHAMMK KDQYSVAEGI AISKQALIAP LAAAGMDSYT RAYPFVVKLH LLRELEDFQA VLNGDSYLEK
1901: SFSTSDQVFS KAVDNWENRL RFTQSSLWTR EPLLAFRRLV FGASGLGAQV GNCWLQYAKL CRLAGHYETA HRAILEAQAS GAPNVHMEKA KLLWITKRSD
2001: SAIIELQQSL LNMPEGVVDS TVISSINSLL MAPPNPEPTV RNTQSFKEKK DVAKTLLLYS KWIHHSGQKQ KKDVLNLYTQ VKELLPWEKG YFHLAKYYDE
2101: LYVDARKCQQ ESSVFSSAGS KKGSVSSNLS TEKAGWDYLF KGMYFYAKAL HSGHKNLFQA LPRLLTLWFD FGTIYKTSGS AGNKELKSTH MKIMSLMRGC
2201: LKDLPTYQWL TVLPQLVSRI CHQNADTVLM VKNIITSVLH QFPQQGLWIM AAVSKSTVPA RREAAAEIIQ GARKGFNQSD RGHNLFIQFA SLTDHFIKLC
2301: FHGGQPRSKV INIATEFSAL KRMMPLDIIM PIQQSLTISL PAFHMNNNER HSASVFSGSD LPTISGIADE AEILSSLQRP KKIILLGNDG IEYPFLCKPK
2401: DDLRKDARMM EFTAMINRLL SKYPESRRRK LYIRTFAVAP LTEDCGLVEW VPHTRGLRHI LQDIYISCGK FDRQKTNPQI KRIYDQCAVK KEYEMLKTKI
2501: LPMFPPVFHK WFLTTFSEPA AWFRSRVAYA HTTAVWSMVG HIVGLGDRHG ENILFDSTSG DCVHVDFSCL FDKGLQLEKP ELVPFRLTQN MIDGLGITGY
2601: EGIFMRVCEI TLTVLRTHRE TLMSILETFI HDPLVEWTKS HKSSGVEVQN PHAQRAISSI EARLQGVVVG VPLPVEGQAR RLIADAVSLE NLGKMYIWWM
2701: PWF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.