Factsheet for TraesCSU01G031600.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 3
endoplasmic reticulum 5
vacuole 3
plasma membrane 4
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G354400.1	Wheat	endoplasmic reticulum	96.31	96.91
TraesCS5A01G556900.1	Wheat	extracellular, golgi, plasma membrane	78.48	79.63
KXG39740	Sorghum	endoplasmic reticulum	67.62	69.04
PGSC0003DMT400007849	Potato	cytosol	27.05	53.44
TraesCSU01G129300.1	Wheat	endoplasmic reticulum	52.66	53.43
KRH27969	Soybean	endoplasmic reticulum, vacuole	51.23	52.41
VIT_02s0025g04080.t01	Wine grape	endoplasmic reticulum, vacuole	50.41	52.12
KRH77492	Soybean	endoplasmic reticulum, vacuole	51.02	51.66
GSMUA_Achr5P10500_001	Banana	endoplasmic reticulum, vacuole	43.44	51.58
CDY26591	Canola	extracellular, golgi, plasma membrane	47.75	50.65
CDY16028	Canola	extracellular, golgi	48.77	50.32
PGSC0003DMT400014907	Potato	cytosol	38.73	50.13
Solyc08g080430.1.1	Tomato	endoplasmic reticulum, vacuole	48.77	50.0
Bra019782.1-P	Field mustard	endoplasmic reticulum, extracellular	48.57	49.79
AT1G12740.4	Thale cress	endoplasmic reticulum, extracellular	48.36	49.37
CDY66605	Canola	endoplasmic reticulum, extracellular	47.95	49.37
CDY60267	Canola	extracellular, golgi	47.75	49.26
Solyc08g007900.1.1	Tomato	nucleus	46.72	48.41
GSMUA_Achr5P10490_001	Banana	plasma membrane, vacuole	47.75	48.04
Bra026956.1-P	Field mustard	extracellular, golgi	31.97	46.85

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-IV	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150
GO:GO:0008152	GO:GO:0016705	GO:GO:0020037	GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067
PRINTS:PR00465	ScanProsite:PS00086	PANTHER:PTHR24286	PANTHER:PTHR24286:SF55	SUPFAM:SSF48264	TMHMM:TMhelix
EnsemblPlantsGene:TraesCSU01G031600	EnsemblPlants:TraesCSU01G031600.1	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:29287302..29289849

Molecular Weight (calculated)

55117.1 Da

IEP (calculated)

9.269

GRAVY (calculated)

-0.047

Length

488 amino acids

Sequence
(BLAST)

001: MDMEEGYYFY SYASLCGALA VIVAGWLVYR WMSPPCNTGR LPPGSMGFPL IGETFRFFKP SPSIDIPAFY KQRLKRYGPL FKTNLVGQPL VVSMDAEVNR
101: FIFQQEGKLF RSWYPDTTNI IFGKESLASC DGSLHKFVRS FAARLFGVDS LRDVLLAEME HNVARSFAAW AAEPEGIEVK DVVSTMIFDL MAKKLIGFGP
201: EKSRKLRKNL DVFFQGMVSF PLYFPGTAFY KCIQGRKNVQ KVLKDLLKER LGAPQKRHGD FLDEVVDELQ SGPGMLNEKF AIDLVGALLF ASFATVSSSL
301: TVAMKFLSDQ PSMVEALKEE HEAILKKRAG ANTSAITWEE YKSMAFTAQV TNEIVRLSNV APGIFRKTLT DVQVKGYTIP AGWLVMISPI SVNLNPELYE
401: DPLAFNPWRW QDESKKSTLL KNFMPFGGGL RLCVGAEFSR IQIALFLHTL VTKYRWKEIK GGEVQRISEI VFPKGYHIQI IPREESIN

Best Arabidopsis Sequence Match ( AT1G12740.1 )
(BLAST)

001: MWALLIWVSL LLISITHWVY SWRNPKCRGK LPPGSMGFPL LGESIQFFKP NKTSDIPPFI KERVKKYGPI FKTNLVGRPV IVSTDADLSY FVFNQEGRCF
101: QSWYPDTFTH IFGKKNVGSL HGFMYKYLKN MVLTLFGHDG LKKMLPQVEM TANKRLELWS NQDSVELKDA TASMIFDLTA KKLISHDPDK SSENLRANFV
201: AFIQGLISFP FDIPGTAYHK CLQGRAKAMK MLRNMLQERR ENPRKNPSDF FDYVIEEIQK EGTILTEEIA LDLMFVLLFA SFETTSLALT LAIKFLSDDP
301: EVLKRLTEEH ETILRNREDA DSGLTWEEYK SMTYTFQFIN ETARLANIVP AIFRKALRDI KFKDYTIPAG WAVMVCPPAV HLNPEMYKDP LVFNPSRWEG
401: SKVTNASKHF MAFGGGMRFC VGTDFTKLQM AAFLHSLVTK YRWEEIKGGN ITRTPGLQFP NGYHVKLHKK RD

Arabidopsis Description

CYP87A2Cytochrome P450, family 87, subfamily A, polypeptide 2 [Source:UniProtKB/TrEMBL;Acc:Q9LN73]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.