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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • cytosol 1
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, mitochondrion, secretory
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:endoplasmic reticulum
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G418600.1 Wheat endoplasmic reticulum 72.8 72.2
TraesCS2A01G400500.1 Wheat endoplasmic reticulum 72.8 72.2
TraesCS2D01G398100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 72.18 71.58
HORVU2Hr1G095080.6 Barley endoplasmic reticulum, golgi 72.59 70.39
TraesCS7B01G354400.1 Wheat endoplasmic reticulum 69.67 68.66
TraesCS5A01G556900.1 Wheat extracellular, golgi, plasma membrane 68.62 68.19
TraesCSU01G031600.1 Wheat endoplasmic reticulum 69.04 67.62
KXG27894 Sorghum endoplasmic reticulum, plasma membrane 61.92 60.41
KXG28806 Sorghum extracellular, plasma membrane 56.28 58.35
KXG34877 Sorghum endoplasmic reticulum, extracellular 57.32 57.44
KXG34804 Sorghum cytosol 52.72 56.76
GSMUA_Achr5P10500_001 Banana endoplasmic reticulum, vacuole 45.61 53.04
VIT_02s0025g04080.t01 Wine grape endoplasmic reticulum, vacuole 50.42 51.06
KRH27969 Soybean endoplasmic reticulum, vacuole 50.21 50.31
GSMUA_Achr5P10490_001 Banana plasma membrane, vacuole 50.63 49.9
KRH77492 Soybean endoplasmic reticulum, vacuole 50.21 49.79
EES05736 Sorghum endoplasmic reticulum 50.0 49.59
Solyc08g080430.1.1 Tomato endoplasmic reticulum, vacuole 48.95 49.16
Bra019782.1-P Field mustard endoplasmic reticulum, extracellular 48.74 48.95
CDY66605 Canola endoplasmic reticulum, extracellular 48.33 48.73
CDY26591 Canola extracellular, golgi, plasma membrane 46.86 48.7
CDY16028 Canola extracellular, golgi 47.7 48.2
Solyc08g007900.1.1 Tomato nucleus 47.49 48.2
EES12690 Sorghum endoplasmic reticulum 52.09 48.16
AT1G12740.4 Thale cress endoplasmic reticulum, extracellular 47.91 47.91
CDY60267 Canola extracellular, golgi 47.28 47.78
PGSC0003DMT400007849 Potato cytosol 24.69 47.77
OQU82181 Sorghum endoplasmic reticulum, golgi, vacuole 49.16 47.57
PGSC0003DMT400014907 Potato cytosol 37.45 47.48
Bra026956.1-P Field mustard extracellular, golgi 31.17 44.74
EER91217 Sorghum endoplasmic reticulum, golgi 44.77 44.49
KXG37898 Sorghum endoplasmic reticulum 44.77 44.49
EER91216 Sorghum endoplasmic reticulum 43.93 43.57
EER91122 Sorghum endoplasmic reticulum 43.1 42.74
OQU91239 Sorghum plastid 44.77 41.55
EER93839 Sorghum endoplasmic reticulum 31.17 32.04
EER92600 Sorghum endoplasmic reticulum 33.68 31.88
EES10969 Sorghum endoplasmic reticulum 30.96 30.27
KXG30524 Sorghum endoplasmic reticulum 29.08 28.48
EES02301 Sorghum endoplasmic reticulum, golgi, plastid 29.92 28.09
EES17857 Sorghum plastid 29.71 27.05
OQU82855 Sorghum endoplasmic reticulum 29.08 27.04
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13UniProt:A0A1B6QP84InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506
GO:GO:0005575GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016491
GO:GO:0016705GO:GO:0020037GO:GO:0046872GO:GO:0055114InterPro:IPR036396EnsemblPlants:KXG39740
ProteinID:KXG39740ProteinID:KXG39740.1PFAM:PF00067PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24286
PANTHER:PTHR24286:SF55EnsemblPlantsGene:SORBI_3001G430600SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI00081AC810SEG:seg
Description
hypothetical protein
Coordinates
chr1:+:70959452..70963808
Molecular Weight (calculated)
54068.8 Da
IEP (calculated)
9.721
GRAVY (calculated)
-0.015
Length
478 amino acids
Sequence
(BLAST)
001: MEALQVPYAI LGWSVSTLVV GWLLHWVYKW RHPPCNGKLP PGSMGFPIVG ETFQFFRPSP SLGIPVFYKE RLNRYGPVFR TSLVGQPVVV SLDAEVNRFI
101: FQQEGKLFRS WYPDTSNSIF GKESINSYDG ILHRYVRGLA ARDFGLNNLK GPFLTEMADV VATSLQAWAA QPSIEVKEAI SNMIFDMTAK KLIGVDVARA
201: RELRKNYESF FQGLIAFPLY VPGTTFYRCM QGRKKVQSVL KELLKERLSA PEKRHGDLLD IVVDDLQSEK PVATDKFAID AIAALLFASF ATIASTLSVA
301: MKFLTDNPKV VEALTEEHET ILKKREGVNS SITWDEYKSM TFTAQVMNEI TRVGNVAPGI FRKSLKDVQV NGYTIPAGWL VMISPMAVHL NPRLFEDPLT
401: FNPWRWQDNK STLLRNFMPF GGGIRLCVGA EFSKVLIALF IHTLVTNYRW REVKGGDVLR ISEIVFPQGY HIQLLPRT
Best Arabidopsis Sequence Match ( AT1G12740.1 )
(BLAST)
001: MWALLIWVSL LLISITHWVY SWRNPKCRGK LPPGSMGFPL LGESIQFFKP NKTSDIPPFI KERVKKYGPI FKTNLVGRPV IVSTDADLSY FVFNQEGRCF
101: QSWYPDTFTH IFGKKNVGSL HGFMYKYLKN MVLTLFGHDG LKKMLPQVEM TANKRLELWS NQDSVELKDA TASMIFDLTA KKLISHDPDK SSENLRANFV
201: AFIQGLISFP FDIPGTAYHK CLQGRAKAMK MLRNMLQERR ENPRKNPSDF FDYVIEEIQK EGTILTEEIA LDLMFVLLFA SFETTSLALT LAIKFLSDDP
301: EVLKRLTEEH ETILRNREDA DSGLTWEEYK SMTYTFQFIN ETARLANIVP AIFRKALRDI KFKDYTIPAG WAVMVCPPAV HLNPEMYKDP LVFNPSRWEG
401: SKVTNASKHF MAFGGGMRFC VGTDFTKLQM AAFLHSLVTK YRWEEIKGGN ITRTPGLQFP NGYHVKLHKK RD
Arabidopsis Description
CYP87A2Cytochrome P450, family 87, subfamily A, polypeptide 2 [Source:UniProtKB/TrEMBL;Acc:Q9LN73]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.