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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • cytosol 2
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:cytosol, plastid, secretory
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:extracellular
Predotar:plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG28806 Sorghum extracellular, plasma membrane 69.81 72.23
KXG39740 Sorghum endoplasmic reticulum 57.44 57.32
KXG27894 Sorghum endoplasmic reticulum, plasma membrane 57.02 55.51
TraesCS2D01G012800.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 52.83 54.43
TraesCS5B01G551300.1 Wheat endoplasmic reticulum 54.51 53.61
TraesCS5B01G551600.1 Wheat endoplasmic reticulum 54.51 53.39
TraesCS5B01G551400.1 Wheat endoplasmic reticulum 54.51 53.39
TraesCS5A01G459800.1 Wheat plasma membrane 47.59 51.59
TraesCSU01G129300.1 Wheat endoplasmic reticulum 51.36 50.94
TraesCS4A01G354800.1 Wheat extracellular, plasma membrane 41.72 50.25
GSMUA_Achr5P10500_001 Banana endoplasmic reticulum, vacuole 43.19 50.12
CDY26591 Canola extracellular, golgi, plasma membrane 46.96 48.7
CDY16028 Canola extracellular, golgi 48.01 48.41
AT1G12740.4 Thale cress endoplasmic reticulum, extracellular 48.22 48.12
CDY60267 Canola extracellular, golgi 47.59 47.99
VIT_02s0025g04080.t01 Wine grape endoplasmic reticulum, vacuole 47.38 47.88
PGSC0003DMT400007849 Potato cytosol 24.74 47.77
CDY66605 Canola endoplasmic reticulum, extracellular 47.38 47.68
Bra019782.1-P Field mustard endoplasmic reticulum, extracellular 47.38 47.48
KRH27969 Soybean endoplasmic reticulum, vacuole 47.38 47.38
KXG34804 Sorghum cytosol 43.82 47.07
TraesCS5A01G544600.1 Wheat plasma membrane 32.29 46.67
EES05736 Sorghum endoplasmic reticulum 46.75 46.27
Solyc08g080430.1.1 Tomato endoplasmic reticulum, vacuole 45.91 46.01
KRH77492 Soybean endoplasmic reticulum, vacuole 46.33 45.85
GSMUA_Achr5P10490_001 Banana plasma membrane, vacuole 46.54 45.77
Solyc08g007900.1.1 Tomato nucleus 44.03 44.59
PGSC0003DMT400014907 Potato cytosol 35.01 44.3
OQU82181 Sorghum endoplasmic reticulum, golgi, vacuole 45.49 43.93
Bra026956.1-P Field mustard extracellular, golgi 30.61 43.84
EES12690 Sorghum endoplasmic reticulum 46.96 43.33
EER91122 Sorghum endoplasmic reticulum 41.09 40.66
KXG37898 Sorghum endoplasmic reticulum 40.25 39.92
EER91217 Sorghum endoplasmic reticulum, golgi 38.57 38.25
OQU91239 Sorghum plastid 41.09 38.06
EER91216 Sorghum endoplasmic reticulum 38.36 37.97
EER93839 Sorghum endoplasmic reticulum 28.72 29.46
EER92600 Sorghum endoplasmic reticulum 30.19 28.51
EES10969 Sorghum endoplasmic reticulum 29.14 28.43
KXG30524 Sorghum endoplasmic reticulum 28.3 27.66
EES02301 Sorghum endoplasmic reticulum, golgi, plastid 27.67 25.93
EES17857 Sorghum plastid 28.09 25.52
OQU82855 Sorghum endoplasmic reticulum 26.21 24.32
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13UniProt:A0A1B6QAB4InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506
GO:GO:0005575GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016491
GO:GO:0016705GO:GO:0020037GO:GO:0046872GO:GO:0055114InterPro:IPR036396EnsemblPlants:KXG34877
ProteinID:KXG34877ProteinID:KXG34877.1PFAM:PF00067PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24286
PANTHER:PTHR24286:SF55EnsemblPlantsGene:SORBI_3002G102700SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI00081ADE5B:
Description
hypothetical protein
Coordinates
chr2:+:11945096..11949232
Molecular Weight (calculated)
54476.2 Da
IEP (calculated)
8.374
GRAVY (calculated)
-0.106
Length
477 amino acids
Sequence
(BLAST)
001: METSLVTYAC LCGATTLSIG WLLHWIYKWM NPPCSGALPP GSMGFPILGE SIQFFRRSSS LDVPDFYKIR LKRYGSIFKT SLVGQPVVTA DPEVNRFIFQ
101: QEGKLFRSWY PEAANIITGE ETIDGFHGPP HKFIRNSINK LFGLEYLKHN LHEVDGAIRK TFAEWSAKCV IDVHDSTPDM IIDQVAKMLF SLNPSESREW
201: TKNYSAFLQG LISFPLYLPG TTFYHCMQGR RNMQKVMSNL LRKRLSKPEV KHGDFLDLII EELQTEKPTI DDKFATDALV ALLFTSFVTL APILTLAFKF
301: LSDNPEVIKA LEEEHEAIVR NRCDASSGIT WEEYKSLTFT NMVVNELTRM SNATPGVFRK TMTDVQVNGY TIPSGWMVMV CPMAVHVNPE FFEDPLKFNP
401: WRWQDESKRS TLLKSFMPFG IGMRTCPATD FSKLFTAIFL HVLVTKYRWK NIDGGEVGRM GVIIFPNGYK IKLLPRT
Best Arabidopsis Sequence Match ( AT1G12740.1 )
(BLAST)
001: MWALLIWVSL LLISITHWVY SWRNPKCRGK LPPGSMGFPL LGESIQFFKP NKTSDIPPFI KERVKKYGPI FKTNLVGRPV IVSTDADLSY FVFNQEGRCF
101: QSWYPDTFTH IFGKKNVGSL HGFMYKYLKN MVLTLFGHDG LKKMLPQVEM TANKRLELWS NQDSVELKDA TASMIFDLTA KKLISHDPDK SSENLRANFV
201: AFIQGLISFP FDIPGTAYHK CLQGRAKAMK MLRNMLQERR ENPRKNPSDF FDYVIEEIQK EGTILTEEIA LDLMFVLLFA SFETTSLALT LAIKFLSDDP
301: EVLKRLTEEH ETILRNREDA DSGLTWEEYK SMTYTFQFIN ETARLANIVP AIFRKALRDI KFKDYTIPAG WAVMVCPPAV HLNPEMYKDP LVFNPSRWEG
401: SKVTNASKHF MAFGGGMRFC VGTDFTKLQM AAFLHSLVTK YRWEEIKGGN ITRTPGLQFP NGYHVKLHKK RD
Arabidopsis Description
CYP87A2Cytochrome P450, family 87, subfamily A, polypeptide 2 [Source:UniProtKB/TrEMBL;Acc:Q9LN73]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.