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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 7
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • mitochondrion 2
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d033180_P001 Maize endoplasmic reticulum 95.48 97.16
Os03t0602300-01 Rice endoplasmic reticulum 83.87 83.16
TraesCS2D01G014400.1 Wheat endoplasmic reticulum 81.72 80.34
TraesCS2D01G014200.1 Wheat golgi 81.51 80.13
TraesCS2D01G014700.1 Wheat golgi 80.65 79.79
TraesCS2A01G013500.1 Wheat endoplasmic reticulum, golgi 80.65 79.62
TraesCS2B01G004400.1 Wheat endoplasmic reticulum 80.43 79.24
TraesCS2B01G004500.1 Wheat endoplasmic reticulum 80.0 78.48
TraesCS2D01G014500.1 Wheat endoplasmic reticulum 77.42 77.09
TraesCS2B01G004600.1 Wheat endoplasmic reticulum, golgi 75.91 75.59
TraesCS2D01G014600.1 Wheat endoplasmic reticulum 75.91 75.59
TraesCS2B01G004200.1 Wheat endoplasmic reticulum, golgi 76.56 74.32
TraesCS2A01G013400.1 Wheat endoplasmic reticulum 75.05 74.1
TraesCS2A01G013000.1 Wheat endoplasmic reticulum 76.34 70.44
TraesCS2A01G013200.2 Wheat endoplasmic reticulum 76.77 70.41
HORVU4Hr1G032830.1 Barley cytosol 52.9 67.77
KRG93691 Soybean endoplasmic reticulum, golgi 65.16 65.16
VIT_14s0083g01110.t01 Wine grape endoplasmic reticulum, golgi 64.95 65.09
KRH01364 Soybean endoplasmic reticulum, golgi 64.09 64.22
KRH18341 Soybean endoplasmic reticulum, golgi 64.3 64.16
KRH45089 Soybean endoplasmic reticulum, golgi 63.66 63.79
TraesCS2B01G004700.1 Wheat endoplasmic reticulum, golgi 72.9 63.72
GSMUA_Achr8P28130_001 Banana cytosol 57.85 62.7
PGSC0003DMT400003477 Potato endoplasmic reticulum, extracellular 62.37 62.5
VIT_01s0011g00190.t01 Wine grape endoplasmic reticulum, golgi 62.15 62.42
Solyc02g089160.2.1 Tomato endoplasmic reticulum 62.15 62.28
CDX99676 Canola cytosol 30.54 61.47
PGSC0003DMT400088007 Potato cytosol 50.97 61.24
Bra020747.1-P Field mustard endoplasmic reticulum, golgi 59.57 59.96
CDY66116 Canola endoplasmic reticulum, golgi 59.57 59.96
CDY35786 Canola endoplasmic reticulum, golgi 58.92 59.31
VIT_01s0011g00170.t01 Wine grape endoplasmic reticulum 37.42 59.18
CDX86355 Canola golgi 59.14 59.14
Bra025409.1-P Field mustard golgi 59.14 59.14
Solyc02g065750.1.1 Tomato endoplasmic reticulum 59.35 59.1
AT3G30180.1 Thale cress endoplasmic reticulum, golgi 58.92 58.92
CDY00084 Canola endoplasmic reticulum, golgi 58.71 58.71
CDX99675 Canola endoplasmic reticulum 58.71 58.71
Bra025427.1-P Field mustard endoplasmic reticulum 58.49 58.49
CDY19979 Canola endoplasmic reticulum, golgi 58.28 58.28
Bra036203.1-P Field mustard endoplasmic reticulum, golgi 58.06 58.06
AT5G38970.1 Thale cress endoplasmic reticulum, golgi 56.99 56.99
CDX85284 Canola endoplasmic reticulum, golgi 44.95 56.49
HORVU2Hr1G002250.3 Barley cytosol 56.34 55.04
KRH70958 Soybean endoplasmic reticulum 52.9 53.02
CDY15962 Canola endoplasmic reticulum, plasma membrane 51.18 51.18
EER92600 Sorghum endoplasmic reticulum 35.91 33.07
KXG30524 Sorghum endoplasmic reticulum 34.19 32.58
EES05736 Sorghum endoplasmic reticulum 33.76 32.57
EES02301 Sorghum endoplasmic reticulum, golgi, plastid 35.05 32.02
KXG37898 Sorghum endoplasmic reticulum 33.12 32.02
EES12690 Sorghum endoplasmic reticulum 35.05 31.53
EER91217 Sorghum endoplasmic reticulum, golgi 32.47 31.39
EER91216 Sorghum endoplasmic reticulum 32.47 31.33
KXG39740 Sorghum endoplasmic reticulum 32.04 31.17
EER91122 Sorghum endoplasmic reticulum 32.04 30.91
OQU82855 Sorghum endoplasmic reticulum 33.98 30.74
KXG34804 Sorghum cytosol 29.25 30.63
OQU91239 Sorghum plastid 33.76 30.49
KXG28806 Sorghum extracellular, plasma membrane 30.11 30.37
KXG27894 Sorghum endoplasmic reticulum, plasma membrane 31.83 30.2
OQU82181 Sorghum endoplasmic reticulum, golgi, vacuole 31.61 29.76
EES17857 Sorghum plastid 33.12 29.33
EES10969 Sorghum endoplasmic reticulum 30.75 29.24
KXG34877 Sorghum endoplasmic reticulum, extracellular 29.46 28.72
Protein Annotations
Gene3D:1.10.630.10MapMan:11.3.1.5EntrezGene:8062533UniProt:C5WT85InterPro:Cyt_P450InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfEnsemblPlants:EER93839ProteinID:EER93839ProteinID:EER93839.1GO:GO:0001578
GO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0006629
GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009628GO:GO:0009647
GO:GO:0009791GO:GO:0009987GO:GO:0010268GO:GO:0016043GO:GO:0016125GO:GO:0016132
GO:GO:0016491GO:GO:0016705GO:GO:0020037GO:GO:0046872GO:GO:0055114InterPro:IPR036396
PFAM:PF00067PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24286PANTHER:PTHR24286:SF105
EnsemblPlantsGene:SORBI_3001G172400SUPFAM:SSF48264unigene:Sbi.16380SignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI0001A82C68
RefSeq:XP_002466841.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr1:-:14434718..14438560
Molecular Weight (calculated)
52426.2 Da
IEP (calculated)
9.752
GRAVY (calculated)
-0.112
Length
465 amino acids
Sequence
(BLAST)
001: MAVLLLLVAV LGVVLASSLL LRWNELRYSR RRGLPPGTMG WPLFGETTEF LKQGPSFMKQ RRLRYGSLFR THILGCPTVV CMEPELNRRT LASDGAGFVP
101: GYPQSMLDIL GPNNIAAVHG PLHRAMRGAM LALTRAHMIR AALLPKIDAF MRAHLHGWAG RRVDIQEMTK EMALLSALRQ IAGISAGPLS DALKAELYTL
201: VLGTFSLPIN IPGTNYSKGL QARKKLVAML RQMIADRRSS GCAQDDMLDA LLSGNEGTRA KLTDDQIIDL LITLIYSGYE TVSTTSMMAV KYLSDNPKAL
301: EQIRKEHLDI RKAKSPDDAL DWNDYKSMTF TKAVIYETLR LATVVNGLLR KTTQDVEMNG YVIPKGWRIY VYTREINYDP FLYPEPMVFN PWRWLETNLE
401: SHPHFMLFGG GARMCPGKEV GTVEIATFLH YFITRYRWEE EGNNTISKFP RVAAPNGLHI RVQDY
Best Arabidopsis Sequence Match ( AT3G30180.1 )
(BLAST)
001: MGIMMMILGL LVIIVCLCTA LLRWNQMRYS KKGLPPGTMG WPIFGETTEF LKQGPDFMKN QRLRYGSFFK SHILGCPTIV SMDAELNRYI LMNESKGLVA
101: GYPQSMLDIL GTCNIAAVHG PSHRLMRGSL LSLISPTMMK DHLLPKIDDF MRNYLCGWDD LETVDIQEKT KHMAFLSSLL QIAETLKKPE VEEYRTEFFK
201: LVVGTLSVPI DIPGTNYRSG VQARNNIDRL LTELMQERKE SGETFTDMLG YLMKKEDNRY LLTDKEIRDQ VVTILYSGYE TVSTTSMMAL KYLHDHPKAL
301: EELRREHLAI RERKRPDEPL TLDDIKSMKF TRAVIFETSR LATIVNGVLR KTTHDLELNG YLIPKGWRIY VYTREINYDT SLYEDPMIFN PWRWMEKSLE
401: SKSYFLLFGG GVRLCPGKEL GISEVSSFLH YFVTKYRWEE NGEDKLMVFP RVSAPKGYHL KCSPY
Arabidopsis Description
CYP85A2Cytochrome P450 85A2 [Source:UniProtKB/Swiss-Prot;Acc:Q940V4]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.