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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • peroxisome 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d013629_P001 Maize endoplasmic reticulum 88.17 88.17
KXG37898 Sorghum endoplasmic reticulum 86.72 86.9
EER91216 Sorghum endoplasmic reticulum 72.2 72.2
EER91217 Sorghum endoplasmic reticulum, golgi 71.78 71.93
OQU91239 Sorghum plastid 74.9 70.1
TraesCS2B01G385100.1 Wheat cytosol 50.21 66.67
HORVU2Hr1G088750.2 Barley cytosol, endoplasmic reticulum 55.19 63.79
TraesCS2D01G002800.1 Wheat endoplasmic reticulum, plasma membrane 64.73 63.54
TraesCS7D01G117200.1 Wheat endoplasmic reticulum 63.69 63.17
TraesCS2B01G616600.1 Wheat endoplasmic reticulum, plasma membrane 64.32 63.14
TraesCS2D01G364700.1 Wheat endoplasmic reticulum 63.49 62.32
TraesCS2A01G367800.1 Wheat extracellular, plasma membrane 62.86 61.71
TraesCS5A01G307700.1 Wheat endoplasmic reticulum, plasma membrane 62.66 61.63
TraesCS6B01G407100.1 Wheat endoplasmic reticulum, golgi 63.07 61.54
TraesCS5B01G308300.1 Wheat endoplasmic reticulum, plasma membrane 62.45 61.43
Os03t0658800-01 Rice endoplasmic reticulum 62.45 60.81
Os10t0179200-00 Rice cytosol 47.72 60.37
TraesCS6B01G407000.1 Wheat golgi 61.83 60.32
GSMUA_Achr5P10500_001 Banana endoplasmic reticulum, vacuole 45.44 53.28
PGSC0003DMT400007849 Potato cytosol 26.97 52.63
VIT_02s0025g04080.t01 Wine grape endoplasmic reticulum, vacuole 48.55 49.58
PGSC0003DMT400014907 Potato cytosol 38.38 49.07
CDY26591 Canola extracellular, golgi, plasma membrane 45.85 48.04
CDY16028 Canola extracellular, golgi 47.1 47.99
KRH27969 Soybean endoplasmic reticulum, vacuole 47.3 47.8
EES05736 Sorghum endoplasmic reticulum 47.72 47.72
GSMUA_Achr5P10490_001 Banana plasma membrane, vacuole 47.93 47.63
CDY60267 Canola extracellular, golgi 46.68 47.57
Bra019782.1-P Field mustard endoplasmic reticulum, extracellular 46.89 47.48
CDY66605 Canola endoplasmic reticulum, extracellular 46.68 47.47
KRH77492 Soybean endoplasmic reticulum, vacuole 47.3 47.3
Solyc08g080430.1.1 Tomato endoplasmic reticulum, vacuole 46.68 47.27
Solyc08g007900.1.1 Tomato nucleus 46.06 47.13
AT1G12740.4 Thale cress endoplasmic reticulum, extracellular 46.27 46.65
OQU82181 Sorghum endoplasmic reticulum, golgi, vacuole 46.68 45.55
Bra026956.1-P Field mustard extracellular, golgi 30.29 43.84
KXG39740 Sorghum endoplasmic reticulum 42.74 43.1
EES12690 Sorghum endoplasmic reticulum 46.06 42.94
KXG34877 Sorghum endoplasmic reticulum, extracellular 40.66 41.09
KXG34804 Sorghum cytosol 36.93 40.09
KXG27894 Sorghum endoplasmic reticulum, plasma membrane 40.46 39.8
KXG28806 Sorghum extracellular, plasma membrane 37.34 39.05
EER92600 Sorghum endoplasmic reticulum 34.02 32.48
EER93839 Sorghum endoplasmic reticulum 30.91 32.04
KXG30524 Sorghum endoplasmic reticulum 30.91 30.53
EES10969 Sorghum endoplasmic reticulum 30.29 29.86
OQU82855 Sorghum endoplasmic reticulum 31.12 29.18
EES17857 Sorghum plastid 30.08 27.62
EES02301 Sorghum endoplasmic reticulum, golgi, plastid 29.05 27.5
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13UniProt:C5WQF1InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sfEnsemblPlants:EER91122ProteinID:EER91122ProteinID:EER91122.2GO:GO:0003674GO:GO:0003824
GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0006629GO:GO:0007275GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0010268GO:GO:0016125GO:GO:0016132GO:GO:0016491
GO:GO:0016705GO:GO:0020037GO:GO:0046872GO:GO:0055114InterPro:IPR036396PFAM:PF00067
PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24286PANTHER:PTHR24286:SF81EnsemblPlantsGene:SORBI_3001G147500
SUPFAM:SSF48264unigene:Sbi.5460TMHMM:TMhelixUniParc:UPI00081AB62FSEG:seg:
Description
hypothetical protein
Coordinates
chr1:+:11850454..11862286
Molecular Weight (calculated)
54500.7 Da
IEP (calculated)
9.311
GRAVY (calculated)
-0.030
Length
482 amino acids
Sequence
(BLAST)
001: MSSMHYFAAL SVTLLGAILL LIHLAFKWTN GGRTGKEGML PPGSRGLPLL GETLEFFAAS PTLELVPFFK RRLERFGPIF RTNIIGEDLI VSLDPELNAL
101: VLQQEERGFQ IWYPSSFMRV LGASNIVSAL GPLHRHIRNL VLRLFGPEAL RLVLLHDVQR SARDELRSWL DRPDVEVKTA TSRMIFGITA RKLISHDDAA
201: SGGSLCKCFD AWTKGLLSFP LCVPGTAFYK SMRGRQNVMK ILKRQLDERR SAAKRKTVDF FDLVIDELNK PNPIMNENVA LDLLLLLLFA SHETTSIGLT
301: AIIKFLTDNP KALQELTDEH EKIVERRVDP DSDITWEEYK SMKFTSHVIH ESLRMANIAP VVFRQANHDV HIKGYTIPEG SKIMICPSAA HLNSDVYEDP
401: LAFNPWRWKD TPEPVGGSKD FMAFGIGLRL CVGADFAKLQ MAMFLHCLVT NYRWKAISKG KMMFYPGLRF PDGFRIQLLT KA
Best Arabidopsis Sequence Match ( AT1G55940.2 )
(BLAST)
001: MNNLISLDIM KEMWGVALSF VIALVVVKIS LWLYRWANPN CSGKLPPGSM GFPVIGETVE FFKPYSFNEI HPFVKKRMFK HGGSLFRTNI LGSKTIVSTD
101: PEVNFEILKQ ENRCFIMSYP EALVRIFGKD NLFFKQGKDF HRYMRHIALQ LLGPECLKQR FIQQIDIATS EHLKSVSFQG VVDVKDTSGR LILEQMILMI
201: ISNIKPETKS KLIESFRDFS FDLVRSPFDP SFWNALYNGL MARSNVMKML KRMFKERREE ATSDDSKYGD FMETMIYEVE KEGDTINEER SVELILSLLI
301: ASYETTSTMT ALTVKFIAEN PKVLMELKRE HETILQNRAD KESGVTWKEY RSMMNFTHMV INESLRLGSL SPAMFRKAVN DVEIKGYTIP AGWIVLVVPS
401: LLHYDPQIYE QPCEFNPWRW EGKELLSGSK TFMAFGGGAR LCAGAEFARL QMAIFLHHLV TTYDFSLIDK SYIIRAPLLR FSKPIRITIS ENPLSSSHQN
501: ANLF
Arabidopsis Description
CYP708A1cytochrome P450, family 708, subfamily A, polypeptide 1 [Source:TAIR;Acc:AT1G55940]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.