CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
mitochondrion 2
endoplasmic reticulum 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER93592

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G13730.1	EER93592	AT2G01570.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037745_P001	Maize	plasma membrane, plastid	88.57	89.08
Os05t0200400-01	Rice	endoplasmic reticulum, mitochondrion, plastid	43.05	80.14
GSMUA_Achr9P28740_001	Banana	cytosol	32.76	71.97
EES02301	Sorghum	endoplasmic reticulum, golgi, plastid	66.29	68.37
GSMUA_Achr7P09630_001	Banana	endoplasmic reticulum, golgi	60.0	66.32
GSMUA_Achr10P...	Banana	endoplasmic reticulum	55.43	64.67
GSMUA_Achr2P16740_001	Banana	endoplasmic reticulum, golgi, plastid	55.24	64.02
VIT_09s0002g02080.t01	Wine grape	endoplasmic reticulum	55.24	61.05
KRH44159	Soybean	golgi	52.76	58.44
KRH47133	Soybean	extracellular, golgi	52.38	58.14
Solyc03g121510.2.1	Tomato	endoplasmic reticulum, golgi	50.86	57.42
CDX97511	Canola	extracellular, golgi	51.62	55.19
Bra027405.1-P	Field mustard	endoplasmic reticulum, golgi	48.76	54.01
CDY37485	Canola	extracellular, golgi	50.29	53.66
Bra021505.1-P	Field mustard	endoplasmic reticulum, golgi	50.1	53.46
CDY51737	Canola	endoplasmic reticulum, golgi	50.1	53.46
AT3G13730.1	Thale cress	extracellular, golgi	49.52	52.95
CDY23635	Canola	endoplasmic reticulum, golgi	30.29	46.36
OQU82855	Sorghum	endoplasmic reticulum	33.71	34.44
EES10969	Sorghum	endoplasmic reticulum	31.43	33.74
EER93839	Sorghum	endoplasmic reticulum	29.33	33.12
KXG30524	Sorghum	endoplasmic reticulum	30.48	32.79
EES05736	Sorghum	endoplasmic reticulum	28.19	30.71
EER92600	Sorghum	endoplasmic reticulum	29.33	30.5
OQU82181	Sorghum	endoplasmic reticulum, golgi, vacuole	28.38	30.16
EER91122	Sorghum	endoplasmic reticulum	27.62	30.08
KXG39740	Sorghum	endoplasmic reticulum	27.05	29.71
EER91217	Sorghum	endoplasmic reticulum, golgi	27.05	29.52
KXG34804	Sorghum	cytosol	24.76	29.28
KXG28806	Sorghum	extracellular, plasma membrane	25.52	29.07
EES12690	Sorghum	endoplasmic reticulum	28.57	29.01
KXG37898	Sorghum	endoplasmic reticulum	26.29	28.69
OQU91239	Sorghum	plastid	28.0	28.54
KXG34877	Sorghum	endoplasmic reticulum, extracellular	25.52	28.09
EER91216	Sorghum	endoplasmic reticulum	25.71	28.01
KXG27894	Sorghum	endoplasmic reticulum, plasma membrane	25.14	26.94

Protein Annotations

Gene3D:1.10.630.10	MapMan:11.3.1.4	EntrezGene:8055723	UniProt:C5YUK8	ncoils:Coil	InterPro:Cyt_P450
InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	EnsemblPlants:EES17857	ProteinID:EES17857	ProteinID:EES17857.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0006629
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0010268	GO:GO:0016125
GO:GO:0016132	GO:GO:0016491	GO:GO:0016705	GO:GO:0016709	GO:GO:0020037	GO:GO:0046872
GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24286
PANTHER:PTHR24286:SF30	EnsemblPlantsGene:SORBI_3009G074300	SUPFAM:SSF48264	UniParc:UPI0001A889B7	RefSeq:XP_002439427.1	SEG:seg

Description

hypothetical protein

Coordinates

chr9:+:9358716..9363676

Molecular Weight (calculated)

58367.1 Da

IEP (calculated)

9.864

GRAVY (calculated)

-0.105

Length

525 amino acids

Sequence
(BLAST)

001: MWPIIIRGGS WPPSSVDVGS VTAALLLAAA VIFIPRVWSS SRTRRPQVPA SGGSTAGGAR LPAGSLGWPL LGETLAFIRA AYSPRPESFV EKRRLWYGKV
101: FKSHLWGSPA VVSSDPEVSR AVLQADASAF VPWYPRSLME LMGQSSILVL GGGLQRRVHG LAGAFFKSPQ LKAQVTADMQ RRVGRAMDVW SRRHHRSMSS
201: NGCGGAPPVR VQDEAKSIVF EILVRALIGI EEGDEMQYLR QQFQEFIAGL ISLPVKLPGC QLYRSLRAKK RMTKLIKMII QEKRKKMIAE GEDLRGTHPR
301: DMIDVLLGNG NDELTDELIS DNMIDFMIPA EDSVPVLITL AVKYLSECPL ALQQLEEENM ELKSQKSDTG ETLEWTDYMS LTFTQHVITE TLRMGNIING
401: IMRKAVRDVE VRGHLIPKGW RVLVYFRAVH LDAAVHDDPH AFNPWRWKER ADVVPVMSSG GGGGFTPFGG GQRLCPGLDL ARLEASIFLH HLVTSFRWVA
501: EEDTVVNFPT VRLKRGMPIT VTPRT

Best Arabidopsis Sequence Match ( AT3G13730.1 )
(BLAST)

001: MDTSSSLLFF SFFFFIIIVI FNKINGLRSS PASKKKLNDH HVTSQSHGPK FPHGSLGWPV IGETIEFVSS AYSDRPESFM DKRRLMYGRV FKSHIFGTAT
101: IVSTDAEVNR AVLQSDSTAF VPFYPKTVRE LMGKSSILLI NGSLHRRFHG LVGSFLKSPL LKAQIVRDMH KFLSESMDLW SEDQPVLLQD VSKTVAFKVL
201: AKALISVEKG EDLEELKREF ENFISGLMSL PINFPGTQLH RSLQAKKNMV KQVERIIEGK IRKTKNKEED DVIAKDVVDV LLKDSSEHLT HNLIANNMID
301: MMIPGHDSVP VLITLAVKFL SDSPAALNLL TEENMKLKSL KELTGEPLYW NDYLSLPFTQ KVITETLRMG NVIIGVMRKA MKDVEIKGYV IPKGWCFLAY
401: LRSVHLDKLY YESPYKFNPW RWQERDMNTS SFSPFGGGQR LCPGLDLARL ETSVFLHHLV TRFRWIAEED TIINFPTVHM KNKLPIWIKR I

Arabidopsis Description

CYP90D1CYP90D1 [Source:UniProtKB/TrEMBL;Acc:A0A178VDZ8]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.