Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G13730.1 | CDY04092 | AT2G01570.1 | 21798944 |
| AT3G13730.1 | CDY17662 | AT2G01570.1 | 21798944 |
| AT3G13730.1 | CDY36236 | AT2G01570.1 | 21798944 |
| AT3G13730.1 | CDY64837 | AT2G01570.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027405.1-P | Field mustard | endoplasmic reticulum, golgi | 94.5 | 97.89 |
| CDY23635 | Canola | endoplasmic reticulum, golgi | 65.99 | 94.46 |
| AT3G13730.1 | Thale cress | extracellular, golgi | 89.61 | 89.61 |
| CDY37485 | Canola | extracellular, golgi | 88.8 | 88.62 |
| CDY51737 | Canola | endoplasmic reticulum, golgi | 88.39 | 88.21 |
| GSMUA_Achr9P28740_001 | Banana | cytosol | 31.77 | 65.27 |
| KRH47133 | Soybean | extracellular, golgi | 61.71 | 64.06 |
| VIT_09s0002g02080.t01 | Wine grape | endoplasmic reticulum | 61.71 | 63.79 |
| KRH44159 | Soybean | golgi | 61.3 | 63.5 |
| Solyc03g121510.2.1 | Tomato | endoplasmic reticulum, golgi | 59.06 | 62.37 |
| Os05t0200400-01 | Rice | endoplasmic reticulum, mitochondrion, plastid | 34.42 | 59.93 |
| GSMUA_Achr7P09630_001 | Banana | endoplasmic reticulum, golgi | 56.82 | 58.74 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 53.16 | 58.0 |
| GSMUA_Achr2P16740_001 | Banana | endoplasmic reticulum, golgi, plastid | 52.95 | 57.4 |
| TraesCS3D01G106100.1 | Wheat | plastid | 56.01 | 56.24 |
| TraesCS3B01G121200.1 | Wheat | plastid | 56.42 | 56.07 |
| HORVU3Hr1G018860.5 | Barley | endoplasmic reticulum | 56.62 | 56.05 |
| Os01t0197100-01 | Rice | endoplasmic reticulum | 55.6 | 55.71 |
| TraesCS3A01G103800.1 | Wheat | plastid | 54.99 | 55.44 |
| EES02301 | Sorghum | endoplasmic reticulum, golgi, plastid | 56.82 | 54.81 |
| Zm00001d039453_P001 | Maize | plastid | 55.19 | 53.77 |
| EES17857 | Sorghum | plastid | 55.19 | 51.62 |
| Zm00001d037745_P001 | Maize | plasma membrane, plastid | 53.16 | 50.0 |
| CDY59695 | Canola | golgi | 48.27 | 46.93 |
| CDX75570 | Canola | cytosol, golgi, plastid | 48.27 | 44.97 |
| CDY64922 | Canola | plasma membrane | 48.47 | 43.91 |
| CDY04961 | Canola | cytosol | 19.76 | 42.73 |
| CDX69220 | Canola | golgi, peroxisome, plastid | 36.25 | 40.92 |
| CDY26518 | Canola | mitochondrion | 22.81 | 39.02 |
| CDX98856 | Canola | endoplasmic reticulum, golgi | 37.47 | 38.33 |
| CDX70137 | Canola | endoplasmic reticulum, golgi | 37.27 | 38.12 |
| CDY14104 | Canola | endoplasmic reticulum | 36.66 | 37.82 |
| CDY11332 | Canola | endoplasmic reticulum, golgi | 35.85 | 36.74 |
| CDX80969 | Canola | endoplasmic reticulum | 33.2 | 35.36 |
| CDY49400 | Canola | endoplasmic reticulum, golgi | 35.44 | 35.22 |
| CDX77934 | Canola | endoplasmic reticulum, golgi | 35.44 | 35.15 |
| CDY24488 | Canola | endoplasmic reticulum, golgi | 34.83 | 34.55 |
| CDX99676 | Canola | cytosol | 15.89 | 33.77 |
| CDX72982 | Canola | endoplasmic reticulum, golgi | 32.38 | 32.85 |
| CDX96469 | Canola | endoplasmic reticulum, golgi | 31.98 | 32.44 |
| CDX86355 | Canola | golgi | 30.35 | 32.04 |
| CDX99675 | Canola | endoplasmic reticulum | 30.14 | 31.83 |
| CDX91063 | Canola | cytosol | 27.9 | 31.49 |
| CDX85598 | Canola | cytosol | 27.7 | 31.41 |
| CDY00084 | Canola | endoplasmic reticulum, golgi | 29.74 | 31.4 |
| CDY19979 | Canola | endoplasmic reticulum, golgi | 29.53 | 31.18 |
| CDX69583 | Canola | cytosol | 27.49 | 31.03 |
| CDY66116 | Canola | endoplasmic reticulum, golgi | 28.51 | 30.3 |
| CDY35786 | Canola | endoplasmic reticulum, golgi | 28.51 | 30.3 |
| CDY26591 | Canola | extracellular, golgi, plasma membrane | 28.11 | 30.0 |
| CDY09852 | Canola | endoplasmic reticulum, extracellular | 28.92 | 29.89 |
| CDY16028 | Canola | extracellular, golgi | 28.72 | 29.81 |
| CDX85284 | Canola | endoplasmic reticulum, golgi | 22.0 | 29.19 |
| CDY60267 | Canola | extracellular, golgi | 28.11 | 29.18 |
| CDY66605 | Canola | endoplasmic reticulum, extracellular | 28.11 | 29.11 |
| CDX89542 | Canola | endoplasmic reticulum, extracellular | 4.89 | 28.92 |
| CDY16450 | Canola | extracellular, vacuole | 25.87 | 27.79 |
| CDY15962 | Canola | endoplasmic reticulum, plasma membrane | 25.66 | 27.1 |
| CDX80949 | Canola | extracellular, golgi, plasma membrane | 27.49 | 26.21 |
| CDX76894 | Canola | extracellular, golgi, vacuole | 24.44 | 25.26 |
| CDY49434 | Canola | golgi, vacuole | 24.44 | 25.26 |
| CDX89543 | Canola | cytosol | 16.5 | 24.92 |
| CDY38927 | Canola | endoplasmic reticulum, extracellular | 24.24 | 24.69 |
| CDY38926 | Canola | endoplasmic reticulum | 24.85 | 24.55 |
| CDY04940 | Canola | endoplasmic reticulum, extracellular | 12.22 | 22.3 |
Protein Annotations
| Gene3D:1.10.630.10 | MapMan:11.3.1.4 | GO:A0A078E8K7 | EnsemblPlants:CDX97511 | ProteinID:CDX97511 | ProteinID:CDX97511.1 |
| InterPro:Cyt_P450 | InterPro:Cyt_P450_CS | InterPro:Cyt_P450_E_grp-I | InterPro:Cyt_P450_sf | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005506 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016705 | GO:GO:0020037 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00104718001 | InterPro:IPR036396 | PFAM:PF00067 | PRINTS:PR00463 | ScanProsite:PS00086 |
| PANTHER:PTHR24286 | PANTHER:PTHR24286:SF30 | SUPFAM:SSF48264 | TMHMM:TMhelix | UniParc:UPI0004EE11CC | SEG:seg |
Description
BnaA05g25680D
Coordinates
chrLK031900:-:49432..52119
Molecular Weight (calculated)
56038.5 Da
IEP (calculated)
9.701
GRAVY (calculated)
-0.120
Length
491 amino acids
Sequence
(BLAST)
(BLAST)
001: MDISSSLLLL SFVLFVIIIF IFNKINGLRT SSVSKKKLTD HVSTHSYGPR FPQGSLGWPI LGETIEFVSS AYSDYPESFM DKRQLMYGRV FKSHIFGTAT
101: IVSTDAEVNK AVLQSDSTAF VPFYPKTVRE LMGKSSILLI NGSLHRRFHG LVGSFLKSPP LKAQIVRDMH KFLSESMDLW SEDQPVLLQD VSKNVAFKVL
201: AKALISVEKG EELEELKEEF EQFIRGLMSL PINLPGTQLH RSLQAKKKMV KQVEKIIGDK VRRAKNKEED GAVAKDVVDV LLKDSSEKLT HNLIANNMID
301: MMIPGHDSVP VLITLAVKFL SDSPTALHFL TEENMELKSL KELTGEQLYW NDYLSLPFTQ KVITETLRMG NVIIGVMRKA MKDVEIKGYV IPKGWCFLAY
401: LRSVHLDKLH YDSPYKFNPW RWQERDMNTS SFSPFGGGQR LCPGLDLARL EASIFLHHLV TRFRWVAEED TIINFPTVHM KNKLPIWIKR R
101: IVSTDAEVNK AVLQSDSTAF VPFYPKTVRE LMGKSSILLI NGSLHRRFHG LVGSFLKSPP LKAQIVRDMH KFLSESMDLW SEDQPVLLQD VSKNVAFKVL
201: AKALISVEKG EELEELKEEF EQFIRGLMSL PINLPGTQLH RSLQAKKKMV KQVEKIIGDK VRRAKNKEED GAVAKDVVDV LLKDSSEKLT HNLIANNMID
301: MMIPGHDSVP VLITLAVKFL SDSPTALHFL TEENMELKSL KELTGEQLYW NDYLSLPFTQ KVITETLRMG NVIIGVMRKA MKDVEIKGYV IPKGWCFLAY
401: LRSVHLDKLH YDSPYKFNPW RWQERDMNTS SFSPFGGGQR LCPGLDLARL EASIFLHHLV TRFRWVAEED TIINFPTVHM KNKLPIWIKR R
001: MDTSSSLLFF SFFFFIIIVI FNKINGLRSS PASKKKLNDH HVTSQSHGPK FPHGSLGWPV IGETIEFVSS AYSDRPESFM DKRRLMYGRV FKSHIFGTAT
101: IVSTDAEVNR AVLQSDSTAF VPFYPKTVRE LMGKSSILLI NGSLHRRFHG LVGSFLKSPL LKAQIVRDMH KFLSESMDLW SEDQPVLLQD VSKTVAFKVL
201: AKALISVEKG EDLEELKREF ENFISGLMSL PINFPGTQLH RSLQAKKNMV KQVERIIEGK IRKTKNKEED DVIAKDVVDV LLKDSSEHLT HNLIANNMID
301: MMIPGHDSVP VLITLAVKFL SDSPAALNLL TEENMKLKSL KELTGEPLYW NDYLSLPFTQ KVITETLRMG NVIIGVMRKA MKDVEIKGYV IPKGWCFLAY
401: LRSVHLDKLY YESPYKFNPW RWQERDMNTS SFSPFGGGQR LCPGLDLARL ETSVFLHHLV TRFRWIAEED TIINFPTVHM KNKLPIWIKR I
101: IVSTDAEVNR AVLQSDSTAF VPFYPKTVRE LMGKSSILLI NGSLHRRFHG LVGSFLKSPL LKAQIVRDMH KFLSESMDLW SEDQPVLLQD VSKTVAFKVL
201: AKALISVEKG EDLEELKREF ENFISGLMSL PINFPGTQLH RSLQAKKNMV KQVERIIEGK IRKTKNKEED DVIAKDVVDV LLKDSSEHLT HNLIANNMID
301: MMIPGHDSVP VLITLAVKFL SDSPAALNLL TEENMKLKSL KELTGEPLYW NDYLSLPFTQ KVITETLRMG NVIIGVMRKA MKDVEIKGYV IPKGWCFLAY
401: LRSVHLDKLY YESPYKFNPW RWQERDMNTS SFSPFGGGQR LCPGLDLARL ETSVFLHHLV TRFRWIAEED TIINFPTVHM KNKLPIWIKR I
Arabidopsis Description
CYP90D1CYP90D1 [Source:UniProtKB/TrEMBL;Acc:A0A178VDZ8]
SUBAcon: [golgi,extracellular]
SUBAcon: [golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.