Factsheet for HORVU3Hr1G018860.5

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 2
endoplasmic reticulum 3
extracellular 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
TargetP:	secretory
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G006930.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G13730.1	HORVU4Hr1G006930.1	AT2G01570.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G106100.1	Wheat	plastid	93.15	94.48
TraesCS3A01G103800.1	Wheat	plastid	92.54	94.25
TraesCS3B01G121200.1	Wheat	plastid	93.35	93.72
Os01t0197100-01	Rice	endoplasmic reticulum	79.64	80.61
EES02301	Sorghum	endoplasmic reticulum, golgi, plastid	82.06	79.96
Zm00001d039453_P001	Maize	plastid	81.25	79.96
GSMUA_Achr9P28740_001	Banana	cytosol	36.49	75.73
GSMUA_Achr10P...	Banana	endoplasmic reticulum	62.9	69.33
GSMUA_Achr7P09630_001	Banana	endoplasmic reticulum, golgi	65.32	68.21
GSMUA_Achr2P16740_001	Banana	endoplasmic reticulum, golgi, plastid	61.69	67.55
VIT_09s0002g02080.t01	Wine grape	endoplasmic reticulum	59.68	62.32
KRH47133	Soybean	extracellular, golgi	59.27	62.16
KRH44159	Soybean	golgi	59.07	61.81
Solyc03g121510.2.1	Tomato	endoplasmic reticulum, golgi	55.04	58.71
CDX97511	Canola	extracellular, golgi	56.05	56.62
AT3G13730.1	Thale cress	extracellular, golgi	55.85	56.42
Bra021505.1-P	Field mustard	endoplasmic reticulum, golgi	55.65	56.1
CDY51737	Canola	endoplasmic reticulum, golgi	55.65	56.1
CDY37485	Canola	extracellular, golgi	55.65	56.1
Bra027405.1-P	Field mustard	endoplasmic reticulum, golgi	53.43	55.91
CDY23635	Canola	endoplasmic reticulum, golgi	33.67	48.69
HORVU5Hr1G043140.1	Barley	endoplasmic reticulum	35.89	35.74
HORVU2Hr1G081650.10	Barley	endoplasmic reticulum, plasma membrane	31.25	32.16
HORVU4Hr1G065440.16	Barley	endoplasmic reticulum	32.66	31.95
HORVU2Hr1G088750.2	Barley	cytosol, endoplasmic reticulum	26.01	30.94
HORVU2Hr1G095030.8	Barley	endoplasmic reticulum, plasma membrane, plastid	30.24	30.86
HORVU2Hr1G095080.6	Barley	endoplasmic reticulum, golgi	30.65	30.83
HORVU4Hr1G032830.1	Barley	cytosol	21.98	30.03
HORVU2Hr1G095130.3	Barley	endoplasmic reticulum	29.84	29.13
HORVU6Hr1G065340.8	Barley	endoplasmic reticulum	28.43	27.98
HORVU2Hr1G002250.3	Barley	cytosol	23.39	24.37

Protein Annotations

Gene3D:1.10.630.10	MapMan:11.3.1.4	UniProt:A0A287KBG8	ncoils:Coil	InterPro:Cyt_P450	InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	GO:GO:0000003	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497
GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0006629	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009791	GO:GO:0009908	GO:GO:0016020	GO:GO:0016021
GO:GO:0016132	GO:GO:0016491	GO:GO:0016705	GO:GO:0016709	GO:GO:0020037	GO:GO:0046872
GO:GO:0048366	GO:GO:0048441	GO:GO:0048443	GO:GO:0055114	EnsemblPlantsGene:HORVU3Hr1G018860	EnsemblPlants:HORVU3Hr1G018860.5
InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24286	PANTHER:PTHR24286:SF98
SUPFAM:SSF48264	TMHMM:TMhelix	UniParc:UPI000B46786C	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr3H:-:49677610..49684110

Molecular Weight (calculated)

55762.3 Da

IEP (calculated)

10.264

GRAVY (calculated)

-0.084

Length

496 amino acids

Sequence
(BLAST)

001: QLPPAMSVSW PAPSTWAAAG AFLAAAWLLC FRLLPAAARP RRRLATKTGA RLPPGSFGWP VVGETLDFVS CAYSPRPEAF VEKRRLRYGS AVFRSHLFGS
101: ATVVTADAEV SRCVLQSDAR SFVPWYPRSL TELMGKSSIL LINGSLQRRV HGLVGAFFKS PQLKAQVTAD MQRRLAPALA AWREQGPGAR LRIQDHAKTI
201: VFQILVRGLI GLEAGPEMQQ LKQQFQEFIV GLMSLPIKLP GTRLYRSLQA KKRMARVIQR IIQDKRRRRR ALDEAPPARD AIDVLMGDGS EELTDELISD
301: NMIDLMIPAE DSVPVLITLA VKFLSECPLA LQQLEEENMQ LKMRKAGLGE TLQWTDYMSL SFTQHVITET LRMGNIISGI MRKAVRDVEV KGHLIPKGWC
401: VFMYFRSVHL DDMLYEDPCK FNPWRWKEKD VSASSFTPFG GGQRLCPGLD LARLEASIFL HHLVTSFRWV AEEDHIVNFP TVRLKGGMPI RVTARD

Best Arabidopsis Sequence Match ( AT3G13730.1 )
(BLAST)

001: MDTSSSLLFF SFFFFIIIVI FNKINGLRSS PASKKKLNDH HVTSQSHGPK FPHGSLGWPV IGETIEFVSS AYSDRPESFM DKRRLMYGRV FKSHIFGTAT
101: IVSTDAEVNR AVLQSDSTAF VPFYPKTVRE LMGKSSILLI NGSLHRRFHG LVGSFLKSPL LKAQIVRDMH KFLSESMDLW SEDQPVLLQD VSKTVAFKVL
201: AKALISVEKG EDLEELKREF ENFISGLMSL PINFPGTQLH RSLQAKKNMV KQVERIIEGK IRKTKNKEED DVIAKDVVDV LLKDSSEHLT HNLIANNMID
301: MMIPGHDSVP VLITLAVKFL SDSPAALNLL TEENMKLKSL KELTGEPLYW NDYLSLPFTQ KVITETLRMG NVIIGVMRKA MKDVEIKGYV IPKGWCFLAY
401: LRSVHLDKLY YESPYKFNPW RWQERDMNTS SFSPFGGGQR LCPGLDLARL ETSVFLHHLV TRFRWIAEED TIINFPTVHM KNKLPIWIKR I

Arabidopsis Description

CYP90D1CYP90D1 [Source:UniProtKB/TrEMBL;Acc:A0A178VDZ8]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.