Factsheet for HORVU6Hr1G065340.8

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 2
endoplasmic reticulum 4
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
TargetP:	secretory
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G269500.1	Wheat	endoplasmic reticulum	90.87	96.83
TraesCS6D01G237100.1	Wheat	endoplasmic reticulum	90.48	96.41
TraesCS6A01G255900.1	Wheat	endoplasmic reticulum	90.08	95.98
Zm00001d017582_P001	Maize	endoplasmic reticulum	71.03	83.45
Os02t0675400-00	Rice	endoplasmic reticulum	79.17	83.12
EES05736	Sorghum	endoplasmic reticulum	78.97	82.57
HORVU2Hr1G095130.3	Barley	endoplasmic reticulum	75.4	74.8
GSMUA_Achr5P10500_001	Banana	endoplasmic reticulum, vacuole	54.76	67.15
VIT_02s0025g04080.t01	Wine grape	endoplasmic reticulum, vacuole	59.33	63.35
KRH27969	Soybean	endoplasmic reticulum, vacuole	59.92	63.31
PGSC0003DMT400007849	Potato	cytosol	30.95	63.16
KRH77492	Soybean	endoplasmic reticulum, vacuole	59.52	62.24
CDY26591	Canola	extracellular, golgi, plasma membrane	56.15	61.52
Solyc08g080430.1.1	Tomato	endoplasmic reticulum, vacuole	57.94	61.34
CDY16028	Canola	extracellular, golgi	57.14	60.89
CDY60267	Canola	extracellular, golgi	56.75	60.47
CDY66605	Canola	endoplasmic reticulum, extracellular	56.55	60.13
Bra019782.1-P	Field mustard	endoplasmic reticulum, extracellular	56.75	60.08
GSMUA_Achr5P10490_001	Banana	plasma membrane, vacuole	57.74	60.0
AT1G12740.4	Thale cress	endoplasmic reticulum, extracellular	56.35	59.41
PGSC0003DMT400014907	Potato	cytosol	43.06	57.56
Bra026956.1-P	Field mustard	extracellular, golgi	37.5	56.76
Solyc08g007900.1.1	Tomato	nucleus	52.38	56.05
HORVU2Hr1G095030.8	Barley	endoplasmic reticulum, plasma membrane, plastid	52.18	54.12
HORVU2Hr1G095080.6	Barley	endoplasmic reticulum, golgi	47.82	48.88
HORVU2Hr1G088750.2	Barley	cytosol, endoplasmic reticulum	39.88	48.2
HORVU5Hr1G043140.1	Barley	endoplasmic reticulum	32.34	32.73
HORVU2Hr1G081650.10	Barley	endoplasmic reticulum, plasma membrane	29.17	30.5
HORVU4Hr1G065440.16	Barley	endoplasmic reticulum	30.56	30.37
HORVU3Hr1G018860.5	Barley	endoplasmic reticulum	27.98	28.43
HORVU4Hr1G032830.1	Barley	cytosol	19.64	27.27
HORVU2Hr1G002250.3	Barley	cytosol	20.44	21.64

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	UniProt:A0A287UGI8	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:HORVU6Hr1G065340	EnsemblPlants:HORVU6Hr1G065340.8
InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24286	PANTHER:PTHR24286:SF102
SUPFAM:SSF48264	TMHMM:TMhelix	UniParc:UPI000B47C267	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr6H:+:447807021..447810953

Molecular Weight (calculated)

56723.2 Da

IEP (calculated)

9.574

GRAVY (calculated)

-0.063

Length

504 amino acids

Sequence
(BLAST)

001: LGSSMETLWV FALAMAVASI LWAYRWSHPK ANGRLPPGSL GLPLLGETMQ FFAPNPTCDV SPFVKDRVNR YGTIFKTSVV GRAVVVSADP DLNHYIFQQE
101: GKLFESWYPA TFTEIFGRDN VGSLHGFMYK YLKTLVLRLY GQENLRAVLL ADTDTACRAT LASWAGQPSV ELKDGLSTMI FDITAKKLIG YEPTKSSKSL
201: RKNFVAFIRG LISFPVNIPG TAYHECMKGR RNAMKVLKRM MRERMADQGR QRQDFLDVMI EELRREKPVL TETVALDLMF VLLFASFETT ALALTLGIRL
301: ITENPRVLDA LTEEHEAIVR DRKDPDAGLT WAEYKSMTFT SQVTLEIARI ANIVPGIFRK ALQDIEFKGY TIPAGWAVMV CPPAVHLNPE IYEDPLAFNP
401: WRWQGLKPIA CNSHATQSRT PSMLESLNFS QDKMEITGGT KHFMAFGGGL RFCVGTDLSK VLMATFIHCL VTKYRWKTVK GGNTMRTPGL SFPDGFHIQL
501: FPKK

Best Arabidopsis Sequence Match ( AT1G12740.1 )
(BLAST)

001: MWALLIWVSL LLISITHWVY SWRNPKCRGK LPPGSMGFPL LGESIQFFKP NKTSDIPPFI KERVKKYGPI FKTNLVGRPV IVSTDADLSY FVFNQEGRCF
101: QSWYPDTFTH IFGKKNVGSL HGFMYKYLKN MVLTLFGHDG LKKMLPQVEM TANKRLELWS NQDSVELKDA TASMIFDLTA KKLISHDPDK SSENLRANFV
201: AFIQGLISFP FDIPGTAYHK CLQGRAKAMK MLRNMLQERR ENPRKNPSDF FDYVIEEIQK EGTILTEEIA LDLMFVLLFA SFETTSLALT LAIKFLSDDP
301: EVLKRLTEEH ETILRNREDA DSGLTWEEYK SMTYTFQFIN ETARLANIVP AIFRKALRDI KFKDYTIPAG WAVMVCPPAV HLNPEMYKDP LVFNPSRWEG
401: SKVTNASKHF MAFGGGMRFC VGTDFTKLQM AAFLHSLVTK YRWEEIKGGN ITRTPGLQFP NGYHVKLHKK RD

Arabidopsis Description

CYP87A2Cytochrome P450, family 87, subfamily A, polypeptide 2 [Source:UniProtKB/TrEMBL;Acc:Q9LN73]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.