Skip to main content
crop-pal logo
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 8
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • nucleus 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G133400.1 Wheat endoplasmic reticulum, golgi 96.79 96.79
TraesCS5D01G139900.1 Wheat endoplasmic reticulum, golgi 96.18 96.18
TraesCS5A01G131400.1 Wheat endoplasmic reticulum, golgi 95.78 95.59
Os12t0139300-01 Rice endoplasmic reticulum, golgi 85.14 84.63
Os11t0143200-01 Rice endoplasmic reticulum, golgi 84.14 83.63
OQU82855 Sorghum endoplasmic reticulum 82.73 80.16
Zm00001d052475_P001 Maize golgi, vacuole 79.12 78.33
Zm00001d004957_P001 Maize plastid 77.91 75.49
GSMUA_Achr3P08890_001 Banana endoplasmic reticulum, vacuole 64.06 65.1
CDY04961 Canola cytosol 29.52 64.76
GSMUA_Achr8P00150_001 Banana endoplasmic reticulum, golgi 59.64 61.75
KRH31131 Soybean endoplasmic reticulum, golgi 58.23 61.44
KRG97749 Soybean endoplasmic reticulum, golgi 58.43 61.39
CDX98856 Canola endoplasmic reticulum, golgi 58.43 60.62
AT5G05690.1 Thale cress endoplasmic reticulum 57.43 60.59
PGSC0003DMT400061190 Potato endoplasmic reticulum, golgi 59.44 60.41
CDX70137 Canola endoplasmic reticulum, golgi 58.03 60.21
Solyc06g051750.2.1 Tomato endoplasmic reticulum, golgi 58.63 59.96
Bra009126.1-P Field mustard endoplasmic reticulum 54.22 59.87
VIT_13s0067g00660.t01 Wine grape cytosol 43.17 59.07
CDY14104 Canola endoplasmic reticulum 55.62 58.19
KRH14956 Soybean endoplasmic reticulum, golgi 55.62 57.95
KRH73185 Soybean endoplasmic reticulum, golgi 55.22 57.41
Bra028751.1-P Field mustard endoplasmic reticulum, golgi 43.17 56.88
CDY11332 Canola endoplasmic reticulum, golgi 53.82 55.95
Bra005863.1-P Field mustard endoplasmic reticulum, golgi 53.61 55.74
CDX80969 Canola endoplasmic reticulum 50.4 54.45
HORVU4Hr1G065440.16 Barley endoplasmic reticulum 36.55 35.9
HORVU3Hr1G018860.5 Barley endoplasmic reticulum 35.74 35.89
HORVU2Hr1G081650.10 Barley endoplasmic reticulum, plasma membrane 32.13 33.2
HORVU2Hr1G095080.6 Barley endoplasmic reticulum, golgi 32.53 32.86
HORVU2Hr1G088750.2 Barley cytosol, endoplasmic reticulum 27.31 32.61
HORVU6Hr1G065340.8 Barley endoplasmic reticulum 32.73 32.34
HORVU2Hr1G095030.8 Barley endoplasmic reticulum, plasma membrane, plastid 30.92 31.69
HORVU2Hr1G095130.3 Barley endoplasmic reticulum 32.13 31.5
HORVU4Hr1G032830.1 Barley cytosol 20.88 28.65
HORVU2Hr1G002250.3 Barley cytosol 22.09 23.11
Protein Annotations
Gene3D:1.10.630.10MapMan:11.3.1.2ProteinID:AGY46372.1EMBL:AK370511InterPro:Cyt_P450InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfUniProt:F2E2Y8GO:GO:0000003GO:GO:0003674GO:GO:0003824
GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0006629GO:GO:0007275
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009628GO:GO:0009653GO:GO:0009791
GO:GO:0009908GO:GO:0009911GO:GO:0009987GO:GO:0010224GO:GO:0010268GO:GO:0010584
GO:GO:0016020GO:GO:0016021GO:GO:0016043GO:GO:0016132GO:GO:0016491GO:GO:0016705
GO:GO:0020037GO:GO:0030154GO:GO:0046872GO:GO:0048657GO:GO:0055114EnsemblPlantsGene:HORVU5Hr1G043140
EnsemblPlants:HORVU5Hr1G043140.1InterPro:IPR036396PFAM:PF00067PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086
PANTHER:PTHR24286PANTHER:PTHR24286:SF44SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI0002008025SEG:seg
Description
Brassinosteroid C-23 hydroxylase [Source:UniProtKB/TrEMBL;Acc:F2E2Y8]
Coordinates
chrchr5H:+:330900730..330904132
Molecular Weight (calculated)
55945.8 Da
IEP (calculated)
9.451
GRAVY (calculated)
-0.164
Length
498 amino acids
Sequence
(BLAST)
001: MDAGALQLAA TAVAIVAVAL VCRWFLVACA ARGRKQRPRL PPGSTGLPLI GETLRLISAY KTPDPEPFID ERVARHGGVF TTHIFGERTV FSADPAFNRL
101: LLAAEGRAVS CSYPSSITTL LGARSLLLTR GTAHKRLHSL TLTRLGRPAS QPLLAHIDRL VLATMRQWEP TATVRLLDEA KKITFNLTVK QLVSIEPGPW
201: TESLRCEYVK LIDGFFSIPF PFASFLPFTT YGQALKSRKK VAGALREVIR RRMEERGEEN GVKEEMDGKR EKKDMVEELL EADGGSFSEE EMVDFCLSLL
301: VAGYETTSVL MTVAVKFLTE TPAALAQLKE EHENMTKMKG ENQPLEWSDY KSMNFTQCVI NETLRVANII SGVFRRANTD IHFKGYTIPK GCKIFASFRA
401: VHLNNEHYEN ARTFDPWRWQ SNNKLQNEVG ANLFTPFGGG PRLCPGYELA RVVISVFLHH LVMRFSWEAA EEDRLLFFPT TRTLKGYPIN LTRRSKSV
Best Arabidopsis Sequence Match ( AT5G05690.1 )
(BLAST)
001: MAFTAFLLLL SSIAAGFLLL LRRTRYRRMG LPPGSLGLPL IGETFQLIGA YKTENPEPFI DERVARYGSV FMTHLFGEPT IFSADPETNR FVLQNEGKLF
101: ECSYPASICN LLGKHSLLLM KGSLHKRMHS LTMSFANSSI IKDHLMLDID RLVRFNLDSW SSRVLLMEEA KKITFELTVK QLMSFDPGEW SESLRKEYLL
201: VIEGFFSLPL PLFSTTYRKA IQARRKVAEA LTVVVMKRRE EEEEGAERKK DMLAALLAAD DGFSDEEIVD FLVALLVAGY ETTSTIMTLA VKFLTETPLA
301: LAQLKEEHEK IRAMKSDSYS LEWSDYKSMP FTQCVVNETL RVANIIGGVF RRAMTDVEIK GYKIPKGWKV FSSFRAVHLD PNHFKDARTF NPWRWQSNSV
401: TTGPSNVFTP FGGGPRLCPG YELARVALSV FLHRLVTGFS WVPAEQDKLV FFPTTRTQKR YPIFVKRRDF AT
Arabidopsis Description
CYP90A1DWF3 [Source:UniProtKB/TrEMBL;Acc:A0A178UQC4]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.