Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G139900.1 | Wheat | endoplasmic reticulum, golgi | 99.4 | 99.4 |
| TraesCS5A01G131400.1 | Wheat | endoplasmic reticulum, golgi | 98.59 | 98.4 |
| HORVU5Hr1G043140.1 | Barley | endoplasmic reticulum | 96.79 | 96.79 |
| Os12t0139300-01 | Rice | endoplasmic reticulum, golgi | 85.54 | 85.03 |
| Os11t0143200-01 | Rice | endoplasmic reticulum, golgi | 84.54 | 84.03 |
| OQU82855 | Sorghum | endoplasmic reticulum | 83.53 | 80.93 |
| Zm00001d052475_P001 | Maize | golgi, vacuole | 79.32 | 78.53 |
| Zm00001d004957_P001 | Maize | plastid | 78.51 | 76.07 |
| GSMUA_Achr3P08890_001 | Banana | endoplasmic reticulum, vacuole | 64.26 | 65.31 |
| CDY04961 | Canola | cytosol | 29.52 | 64.76 |
| GSMUA_Achr8P00150_001 | Banana | endoplasmic reticulum, golgi | 60.04 | 62.16 |
| KRH31131 | Soybean | endoplasmic reticulum, golgi | 58.23 | 61.44 |
| KRG97749 | Soybean | endoplasmic reticulum, golgi | 58.43 | 61.39 |
| CDX98856 | Canola | endoplasmic reticulum, golgi | 58.84 | 61.04 |
| CDX70137 | Canola | endoplasmic reticulum, golgi | 58.43 | 60.62 |
| AT5G05690.1 | Thale cress | endoplasmic reticulum | 57.43 | 60.59 |
| Bra009126.1-P | Field mustard | endoplasmic reticulum | 54.82 | 60.53 |
| PGSC0003DMT400061190 | Potato | endoplasmic reticulum, golgi | 58.84 | 59.8 |
| Solyc06g051750.2.1 | Tomato | endoplasmic reticulum, golgi | 57.83 | 59.14 |
| VIT_13s0067g00660.t01 | Wine grape | cytosol | 43.17 | 59.07 |
| KRH14956 | Soybean | endoplasmic reticulum, golgi | 56.02 | 58.37 |
| CDY14104 | Canola | endoplasmic reticulum | 55.62 | 58.19 |
| KRH73185 | Soybean | endoplasmic reticulum, golgi | 55.62 | 57.83 |
| Bra028751.1-P | Field mustard | endoplasmic reticulum, golgi | 43.17 | 56.88 |
| CDY11332 | Canola | endoplasmic reticulum, golgi | 53.82 | 55.95 |
| Bra005863.1-P | Field mustard | endoplasmic reticulum, golgi | 53.61 | 55.74 |
| CDX80969 | Canola | endoplasmic reticulum | 50.2 | 54.23 |
| TraesCS4B01G234100.1 | Wheat | endoplasmic reticulum, golgi | 36.55 | 35.97 |
| TraesCS3B01G586500.1 | Wheat | endoplasmic reticulum, plasma membrane | 35.94 | 35.87 |
| TraesCS3B01G121200.1 | Wheat | plastid | 35.14 | 35.43 |
| TraesCS2B01G418600.1 | Wheat | endoplasmic reticulum | 32.93 | 34.02 |
| TraesCS2B01G350400.2 | Wheat | endoplasmic reticulum, golgi | 32.13 | 33.68 |
| TraesCS6B01G269500.1 | Wheat | endoplasmic reticulum | 31.93 | 33.62 |
| TraesCS7B01G354400.1 | Wheat | endoplasmic reticulum | 32.53 | 33.4 |
| TraesCS5B01G308300.1 | Wheat | endoplasmic reticulum, plasma membrane | 31.73 | 32.24 |
| TraesCS2B01G004600.1 | Wheat | endoplasmic reticulum, golgi | 30.12 | 32.12 |
| TraesCS2B01G385100.1 | Wheat | cytosol | 23.29 | 31.96 |
| TraesCS2B01G004500.1 | Wheat | endoplasmic reticulum | 30.32 | 31.86 |
| TraesCS2B01G418700.1 | Wheat | endoplasmic reticulum | 32.33 | 31.69 |
| TraesCS6B01G407100.1 | Wheat | endoplasmic reticulum, golgi | 31.33 | 31.58 |
| TraesCS2B01G616600.1 | Wheat | endoplasmic reticulum, plasma membrane | 31.12 | 31.57 |
| TraesCS2B01G004200.1 | Wheat | endoplasmic reticulum, golgi | 30.12 | 31.32 |
| TraesCS2B01G004400.1 | Wheat | endoplasmic reticulum | 29.52 | 31.14 |
| TraesCS6B01G407000.1 | Wheat | golgi | 30.72 | 30.97 |
| TraesCS5B01G551600.1 | Wheat | endoplasmic reticulum | 29.52 | 30.18 |
| TraesCS5B01G551400.1 | Wheat | endoplasmic reticulum | 29.52 | 30.18 |
| TraesCS5B01G551300.1 | Wheat | endoplasmic reticulum | 29.32 | 30.1 |
| TraesCS2B01G418500.1 | Wheat | endoplasmic reticulum | 30.52 | 29.98 |
| TraesCS2B01G004700.1 | Wheat | endoplasmic reticulum, golgi | 27.11 | 25.38 |
Protein Annotations
| Gene3D:1.10.630.10 | MapMan:11.3.1.2 | InterPro:Cyt_P450 | InterPro:Cyt_P450_CS | InterPro:Cyt_P450_E_grp-I | InterPro:Cyt_P450_sf |
| GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0006629 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009653 |
| GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009911 | GO:GO:0009987 | GO:GO:0010224 | GO:GO:0010268 |
| GO:GO:0010584 | GO:GO:0016043 | GO:GO:0016132 | GO:GO:0016705 | GO:GO:0020037 | GO:GO:0030154 |
| GO:GO:0048657 | GO:GO:0055114 | InterPro:IPR036396 | PFAM:PF00067 | PRINTS:PR00385 | PRINTS:PR00463 |
| ScanProsite:PS00086 | PANTHER:PTHR24286 | PANTHER:PTHR24286:SF44 | SUPFAM:SSF48264 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS5B01G133400 |
| EnsemblPlants:TraesCS5B01G133400.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr5B:+:249366448..249369431
Molecular Weight (calculated)
55964.0 Da
IEP (calculated)
9.757
GRAVY (calculated)
-0.141
Length
498 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAGALQLAA AAVAIVVAAL VCRWFLVACA VGVRKQRPRL PPGSTGLPLI GETLRLISAY KTPDPEPFID ERVARHGGVF TTHIFGERTV FSADPAFNRL
101: LLAAEGRAVS CSYPSSITTL LGARSLLLTR GTAHKRLHSL TLTRLGRPAS QPLLAHIERL VLATMRQWEP TATVRLLDEA KKITFNLTVK QLVSIEPGPW
201: TESLRREYVK LIDGFFSIPF PFASFLPFTT YGQALKSRKK VAGALREVIR KRMEERGEEK GVKEEMDGKR EKKDMVEELL EAEGGSFSEE EMVDFCLSLL
301: VAGYETTSVL MTVAVKFLTE TPAALAQLKE EHENMTKMKG ENQPLEWVDY KSMTFTQCVI NETLRVANII GGVFRRANTD IHFKGYTIPK GCKIFASFRA
401: VHLNNEHYEN ARTFDPWRWQ SNNKLQNEVG ANLFTPFGGG PRLCPGYELA RVVISVFLHH LVMRFSWEAA EEDRLVFFPT TRTLKGYPIN LRRRSKSV
101: LLAAEGRAVS CSYPSSITTL LGARSLLLTR GTAHKRLHSL TLTRLGRPAS QPLLAHIERL VLATMRQWEP TATVRLLDEA KKITFNLTVK QLVSIEPGPW
201: TESLRREYVK LIDGFFSIPF PFASFLPFTT YGQALKSRKK VAGALREVIR KRMEERGEEK GVKEEMDGKR EKKDMVEELL EAEGGSFSEE EMVDFCLSLL
301: VAGYETTSVL MTVAVKFLTE TPAALAQLKE EHENMTKMKG ENQPLEWVDY KSMTFTQCVI NETLRVANII GGVFRRANTD IHFKGYTIPK GCKIFASFRA
401: VHLNNEHYEN ARTFDPWRWQ SNNKLQNEVG ANLFTPFGGG PRLCPGYELA RVVISVFLHH LVMRFSWEAA EEDRLVFFPT TRTLKGYPIN LRRRSKSV
001: MAFTAFLLLL SSIAAGFLLL LRRTRYRRMG LPPGSLGLPL IGETFQLIGA YKTENPEPFI DERVARYGSV FMTHLFGEPT IFSADPETNR FVLQNEGKLF
101: ECSYPASICN LLGKHSLLLM KGSLHKRMHS LTMSFANSSI IKDHLMLDID RLVRFNLDSW SSRVLLMEEA KKITFELTVK QLMSFDPGEW SESLRKEYLL
201: VIEGFFSLPL PLFSTTYRKA IQARRKVAEA LTVVVMKRRE EEEEGAERKK DMLAALLAAD DGFSDEEIVD FLVALLVAGY ETTSTIMTLA VKFLTETPLA
301: LAQLKEEHEK IRAMKSDSYS LEWSDYKSMP FTQCVVNETL RVANIIGGVF RRAMTDVEIK GYKIPKGWKV FSSFRAVHLD PNHFKDARTF NPWRWQSNSV
401: TTGPSNVFTP FGGGPRLCPG YELARVALSV FLHRLVTGFS WVPAEQDKLV FFPTTRTQKR YPIFVKRRDF AT
101: ECSYPASICN LLGKHSLLLM KGSLHKRMHS LTMSFANSSI IKDHLMLDID RLVRFNLDSW SSRVLLMEEA KKITFELTVK QLMSFDPGEW SESLRKEYLL
201: VIEGFFSLPL PLFSTTYRKA IQARRKVAEA LTVVVMKRRE EEEEGAERKK DMLAALLAAD DGFSDEEIVD FLVALLVAGY ETTSTIMTLA VKFLTETPLA
301: LAQLKEEHEK IRAMKSDSYS LEWSDYKSMP FTQCVVNETL RVANIIGGVF RRAMTDVEIK GYKIPKGWKV FSSFRAVHLD PNHFKDARTF NPWRWQSNSV
401: TTGPSNVFTP FGGGPRLCPG YELARVALSV FLHRLVTGFS WVPAEQDKLV FFPTTRTQKR YPIFVKRRDF AT
Arabidopsis Description
CYP90A1DWF3 [Source:UniProtKB/TrEMBL;Acc:A0A178UQC4]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.